RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 COX6B2Q6YFQ2 88 aa7.82□□□□□ -1.16
PDLIM5-202ENST00000318007 H3BPC8 53 aa7.8□□□□□ -1.16
PDLIM5-202ENST00000318007 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
PDLIM5-202ENST00000318007 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
PDLIM5-202ENST00000318007 LOC100996750A0A140TA64 210 aa7.77□□□□□ -1.17
PDLIM5-202ENST00000318007 MPLKIPQ8TAP9 179 aa7.77□□□□□ -1.17
PDLIM5-202ENST00000318007 KRTAP4-6Q9BYQ5 205 aa7.77□□□□□ -1.17
PDLIM5-202ENST00000318007 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
PDLIM5-202ENST00000318007 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
PDLIM5-202ENST00000318007 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.19
PDLIM5-202ENST00000318007 Q1T7F1 81 aa7.62□□□□□ -1.19
PDLIM5-202ENST00000318007 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
PDLIM5-202ENST00000318007 MT1HP80294 61 aa7.59□□□□□ -1.19
PDLIM5-202ENST00000318007 M0R2T5 61 aa7.59□□□□□ -1.2
PDLIM5-202ENST00000318007 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
PDLIM5-202ENST00000318007 LCA10Q71F78 164 aa7.53□□□□□ -1.2
PDLIM5-202ENST00000318007 S4R3F8 94 aa7.53□□□□□ -1.2
PDLIM5-202ENST00000318007 SPANXA2-OT1Q8N9U9 137 aa7.53□□□□□ -1.2
PDLIM5-202ENST00000318007 A8MUN3 132 aa7.51□□□□□ -1.21
PDLIM5-202ENST00000318007 ACYP2P14621 99 aa7.48□□□□□ -1.21
PDLIM5-202ENST00000318007 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
PDLIM5-202ENST00000318007 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
PDLIM5-202ENST00000318007 PSPHP1O15172 72 aa7.41□□□□□ -1.22
PDLIM5-202ENST00000318007 COA5Q86WW8 74 aa7.4□□□□□ -1.22
PDLIM5-202ENST00000318007 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
PDLIM5-202ENST00000318007 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-202ENST00000318007 Q5VV11 94 aa7.33□□□□□ -1.24
PDLIM5-202ENST00000318007 A6NN06 94 aa7.27□□□□□ -1.25
PDLIM5-202ENST00000318007 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
PDLIM5-202ENST00000318007 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
PDLIM5-202ENST00000318007 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
PDLIM5-202ENST00000318007 PRR15LQ9BU68 103 aa7.22□□□□□ -1.25
PDLIM5-202ENST00000318007 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
PDLIM5-202ENST00000318007 MT2AP02795 61 aa7.21□□□□□ -1.26
PDLIM5-202ENST00000318007 A6NED7 52 aa7.2□□□□□ -1.26
PDLIM5-202ENST00000318007 ADM2Q7Z4H4 148 aa7.2□□□□□ -1.26
PDLIM5-202ENST00000318007 A8MU10 97 aa7.19□□□□□ -1.26
PDLIM5-202ENST00000318007 MT1FP04733 61 aa7.19□□□□□ -1.26
PDLIM5-202ENST00000318007 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
PDLIM5-202ENST00000318007 P0C880 135 aa7.12□□□□□ -1.27
PDLIM5-202ENST00000318007 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
PDLIM5-202ENST00000318007 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
PDLIM5-202ENST00000318007 H0YAA0 97 aa7.07□□□□□ -1.28
PDLIM5-202ENST00000318007 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-202ENST00000318007 H3BS24 57 aa7.06□□□□□ -1.28
PDLIM5-202ENST00000318007 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
PDLIM5-202ENST00000318007 A0A1B0GU69 56 aa7.02□□□□□ -1.29
PDLIM5-202ENST00000318007 LINC01554Q52M75 96 aa7□□□□□ -1.29
PDLIM5-202ENST00000318007 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
PDLIM5-202ENST00000318007 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
PDLIM5-202ENST00000318007 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
PDLIM5-202ENST00000318007 R4GN34 69 aa6.96□□□□□ -1.3
PDLIM5-202ENST00000318007 USH2AO75445 5202 aa6.95□□□□□ -1.3
PDLIM5-202ENST00000318007 M0QZ58 72 aa6.95□□□□□ -1.3
PDLIM5-202ENST00000318007 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
PDLIM5-202ENST00000318007 KRTAP13-4Q3LI77 160 aa6.89□□□□□ -1.31
PDLIM5-202ENST00000318007 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
PDLIM5-202ENST00000318007 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
PDLIM5-202ENST00000318007 A0A1B0GU33 70 aa6.87□□□□□ -1.31
PDLIM5-202ENST00000318007 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
PDLIM5-202ENST00000318007 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
PDLIM5-202ENST00000318007 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
PDLIM5-202ENST00000318007 A0A0D9SG42 100 aa6.8□□□□□ -1.32
PDLIM5-202ENST00000318007 KRTAP9-9Q9BYP9 154 aa6.73□□□□□ -1.33
PDLIM5-202ENST00000318007 KRTAP9-4Q9BYQ2 154 aa6.73□□□□□ -1.33
PDLIM5-202ENST00000318007 UQCR11O14957 56 aa6.71□□□□□ -1.34
PDLIM5-202ENST00000318007 MT1BP07438 61 aa6.7□□□□□ -1.34
PDLIM5-202ENST00000318007 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
PDLIM5-202ENST00000318007 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
PDLIM5-202ENST00000318007 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
PDLIM5-202ENST00000318007 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
PDLIM5-202ENST00000318007 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
PDLIM5-202ENST00000318007 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
PDLIM5-202ENST00000318007 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
PDLIM5-202ENST00000318007 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
PDLIM5-202ENST00000318007 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
PDLIM5-202ENST00000318007 ROMO1P60602 79 aa6.53□□□□□ -1.36
PDLIM5-202ENST00000318007 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
PDLIM5-202ENST00000318007 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
PDLIM5-202ENST00000318007 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
PDLIM5-202ENST00000318007 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
PDLIM5-202ENST00000318007 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
PDLIM5-202ENST00000318007 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-202ENST00000318007 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
PDLIM5-202ENST00000318007 MT1XP80297 61 aa6.43□□□□□ -1.38
PDLIM5-202ENST00000318007 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PDLIM5-202ENST00000318007 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
PDLIM5-202ENST00000318007 K7ERS5 55 aa6.35□□□□□ -1.39
PDLIM5-202ENST00000318007 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
PDLIM5-202ENST00000318007 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
PDLIM5-202ENST00000318007 KMT2DO14686 5537 aa6.29□□□□□ -1.4
PDLIM5-202ENST00000318007 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
PDLIM5-202ENST00000318007 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
PDLIM5-202ENST00000318007 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-202ENST00000318007 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-202ENST00000318007 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-202ENST00000318007 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
PDLIM5-202ENST00000318007 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
PDLIM5-202ENST00000318007 TNP1P09430 55 aa6.06□□□□□ -1.44
PDLIM5-202ENST00000318007 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms