RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 LCA10Q71F78 164 aa9.12□□□□□ -0.95
RABGAP1-201ENST00000317419 H7BZZ5 65 aa9.11□□□□□ -0.95
RABGAP1-201ENST00000317419 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
RABGAP1-201ENST00000317419 ACYP2P14621 99 aa9.03□□□□□ -0.96
RABGAP1-201ENST00000317419 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
RABGAP1-201ENST00000317419 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
RABGAP1-201ENST00000317419 CSAG1Q6PB30 78 aa9□□□□□ -0.97
RABGAP1-201ENST00000317419 MT2AP02795 61 aa8.94□□□□□ -0.98
RABGAP1-201ENST00000317419 MT1FP04733 61 aa8.87□□□□□ -0.99
RABGAP1-201ENST00000317419 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
RABGAP1-201ENST00000317419 COA5Q86WW8 74 aa8.83□□□□□ -1
RABGAP1-201ENST00000317419 H0YAA0 97 aa8.82□□□□□ -1
RABGAP1-201ENST00000317419 TMEM258P61165 79 aa8.82□□□□□ -1
RABGAP1-201ENST00000317419 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
RABGAP1-201ENST00000317419 PCP4P48539 62 aa8.79□□□□□ -1
RABGAP1-201ENST00000317419 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
RABGAP1-201ENST00000317419 KRTAP10-10P60014 251 aa8.78□□□□□ -1
RABGAP1-201ENST00000317419 KRTAP9-3Q9BYQ3 159 aa8.72□□□□□ -1.01
RABGAP1-201ENST00000317419 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
RABGAP1-201ENST00000317419 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
RABGAP1-201ENST00000317419 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
RABGAP1-201ENST00000317419 CRIPTQ9P021 101 aa8.59□□□□□ -1.03
RABGAP1-201ENST00000317419 P0C880 135 aa8.58□□□□□ -1.04
RABGAP1-201ENST00000317419 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
RABGAP1-201ENST00000317419 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
RABGAP1-201ENST00000317419 LCE2BO14633 110 aa8.54□□□□□ -1.04
RABGAP1-201ENST00000317419 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
RABGAP1-201ENST00000317419 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
RABGAP1-201ENST00000317419 USH2AO75445 5202 aa8.42□□□□□ -1.06
RABGAP1-201ENST00000317419 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
RABGAP1-201ENST00000317419 SEC61GP60059 68 aa8.41□□□□□ -1.06
RABGAP1-201ENST00000317419 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
RABGAP1-201ENST00000317419 R4GN34 69 aa8.38□□□□□ -1.07
RABGAP1-201ENST00000317419 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
RABGAP1-201ENST00000317419 M0QZ58 72 aa8.35□□□□□ -1.07
RABGAP1-201ENST00000317419 A0A1B0GU69 56 aa8.34□□□□□ -1.08
RABGAP1-201ENST00000317419 MT1BP07438 61 aa8.32□□□□□ -1.08
RABGAP1-201ENST00000317419 Q5VV11 94 aa8.28□□□□□ -1.08
RABGAP1-201ENST00000317419 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
RABGAP1-201ENST00000317419 A0A1B0GU33 70 aa8.25□□□□□ -1.09
RABGAP1-201ENST00000317419 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
RABGAP1-201ENST00000317419 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
RABGAP1-201ENST00000317419 Q1T7F1 81 aa8.23□□□□□ -1.09
RABGAP1-201ENST00000317419 CRCT1Q9UGL9 99 aa8.22□□□□□ -1.09
RABGAP1-201ENST00000317419 V9GYY9 64 aa8.21□□□□□ -1.09
RABGAP1-201ENST00000317419 SSPOA2VEC9 5147 aa8.2□□□□□ -1.1
RABGAP1-201ENST00000317419 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
RABGAP1-201ENST00000317419 KRTAP19-6Q3LI70 58 aa8.16□□□□□ -1.1
RABGAP1-201ENST00000317419 LINC01554Q52M75 96 aa8.15□□□□□ -1.11
RABGAP1-201ENST00000317419 A6NN06 94 aa8.13□□□□□ -1.11
RABGAP1-201ENST00000317419 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
RABGAP1-201ENST00000317419 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
RABGAP1-201ENST00000317419 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
RABGAP1-201ENST00000317419 PSPHP1O15172 72 aa8.04□□□□□ -1.12
RABGAP1-201ENST00000317419 UQCR11O14957 56 aa8.01□□□□□ -1.13
RABGAP1-201ENST00000317419 KRTAP10-5P60370 271 aa8□□□□□ -1.13
RABGAP1-201ENST00000317419 A0A0D9SG42 100 aa7.98□□□□□ -1.13
RABGAP1-201ENST00000317419 A8MU10 97 aa7.95□□□□□ -1.14
RABGAP1-201ENST00000317419 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
RABGAP1-201ENST00000317419 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
RABGAP1-201ENST00000317419 MT1XP80297 61 aa7.93□□□□□ -1.14
RABGAP1-201ENST00000317419 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
RABGAP1-201ENST00000317419 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
RABGAP1-201ENST00000317419 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
RABGAP1-201ENST00000317419 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
RABGAP1-201ENST00000317419 A6NED7 52 aa7.79□□□□□ -1.16
RABGAP1-201ENST00000317419 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
RABGAP1-201ENST00000317419 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
RABGAP1-201ENST00000317419 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
RABGAP1-201ENST00000317419 K7ERS5 55 aa7.57□□□□□ -1.2
RABGAP1-201ENST00000317419 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
RABGAP1-201ENST00000317419 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
RABGAP1-201ENST00000317419 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
RABGAP1-201ENST00000317419 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
RABGAP1-201ENST00000317419 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
RABGAP1-201ENST00000317419 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
RABGAP1-201ENST00000317419 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
RABGAP1-201ENST00000317419 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
RABGAP1-201ENST00000317419 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
RABGAP1-201ENST00000317419 TNP1P09430 55 aa7.35□□□□□ -1.23
RABGAP1-201ENST00000317419 KMT2DO14686 5537 aa7.34□□□□□ -1.23
RABGAP1-201ENST00000317419 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
RABGAP1-201ENST00000317419 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
RABGAP1-201ENST00000317419 KRTAP5-9P26371 169 aa7.29□□□□□ -1.24
RABGAP1-201ENST00000317419 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
RABGAP1-201ENST00000317419 ROMO1P60602 79 aa7.23□□□□□ -1.25
RABGAP1-201ENST00000317419 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
RABGAP1-201ENST00000317419 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
RABGAP1-201ENST00000317419 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
RABGAP1-201ENST00000317419 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
RABGAP1-201ENST00000317419 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
RABGAP1-201ENST00000317419 PRO0628Q9UI54 55 aa7.03□□□□□ -1.28
RABGAP1-201ENST00000317419 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
RABGAP1-201ENST00000317419 MT1EP04732 61 aa6.99□□□□□ -1.29
RABGAP1-201ENST00000317419 PMAIP1Q13794 54 aa6.94□□□□□ -1.3
RABGAP1-201ENST00000317419 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
RABGAP1-201ENST00000317419 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
RABGAP1-201ENST00000317419 NEBP20929 6669 aa6.91□□□□□ -1.3
RABGAP1-201ENST00000317419 SPRR2EP22531 72 aa6.89□□□□□ -1.31
RABGAP1-201ENST00000317419 SPRR2BP35325 72 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms