RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 BRK1Q8WUW1 75 aa8.03□□□□□ -1.12
CALR-201ENST00000316448 PRO0628Q9UI54 55 aa7.98□□□□□ -1.13
CALR-201ENST00000316448 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
CALR-201ENST00000316448 A0A1B0GU69 56 aa7.95□□□□□ -1.14
CALR-201ENST00000316448 A6NED7 52 aa7.93□□□□□ -1.14
CALR-201ENST00000316448 A8MU10 97 aa7.87□□□□□ -1.15
CALR-201ENST00000316448 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
CALR-201ENST00000316448 LCA10Q71F78 164 aa7.86□□□□□ -1.15
CALR-201ENST00000316448 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
CALR-201ENST00000316448 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
CALR-201ENST00000316448 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.16
CALR-201ENST00000316448 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
CALR-201ENST00000316448 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
CALR-201ENST00000316448 S4R3F8 94 aa7.82□□□□□ -1.16
CALR-201ENST00000316448 MUC2Q02817 5179 aa7.82□□□□□ -1.16
CALR-201ENST00000316448 SEC61GP60059 68 aa7.81□□□□□ -1.16
CALR-201ENST00000316448 UQCR11O14957 56 aa7.76□□□□□ -1.17
CALR-201ENST00000316448 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
CALR-201ENST00000316448 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
CALR-201ENST00000316448 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
CALR-201ENST00000316448 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
CALR-201ENST00000316448 A0A1B0GU33 70 aa7.65□□□□□ -1.18
CALR-201ENST00000316448 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
CALR-201ENST00000316448 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
CALR-201ENST00000316448 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
CALR-201ENST00000316448 H0YAA0 97 aa7.62□□□□□ -1.19
CALR-201ENST00000316448 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
CALR-201ENST00000316448 FLGP20930 4061 aaPredicted RBP7.59□□□□□ -1.19
CALR-201ENST00000316448 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
CALR-201ENST00000316448 A6NN06 94 aa7.55□□□□□ -1.2
CALR-201ENST00000316448 P0C880 135 aa7.52□□□□□ -1.2
CALR-201ENST00000316448 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
CALR-201ENST00000316448 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
CALR-201ENST00000316448 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
CALR-201ENST00000316448 MT1HP80294 61 aa7.44□□□□□ -1.22
CALR-201ENST00000316448 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
CALR-201ENST00000316448 M0QZ58 72 aa7.33□□□□□ -1.24
CALR-201ENST00000316448 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
CALR-201ENST00000316448 A0A0D9SG42 100 aa7.29□□□□□ -1.24
CALR-201ENST00000316448 M0R2T5 61 aa7.29□□□□□ -1.24
CALR-201ENST00000316448 K7ERS5 55 aa7.27□□□□□ -1.25
CALR-201ENST00000316448 R4GN34 69 aa7.21□□□□□ -1.25
CALR-201ENST00000316448 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
CALR-201ENST00000316448 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
CALR-201ENST00000316448 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
CALR-201ENST00000316448 MT2AP02795 61 aa7.15□□□□□ -1.26
CALR-201ENST00000316448 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
CALR-201ENST00000316448 MT1FP04733 61 aa7.13□□□□□ -1.27
CALR-201ENST00000316448 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
CALR-201ENST00000316448 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
CALR-201ENST00000316448 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
CALR-201ENST00000316448 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
CALR-201ENST00000316448 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
CALR-201ENST00000316448 ROMO1P60602 79 aa7.05□□□□□ -1.28
CALR-201ENST00000316448 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
CALR-201ENST00000316448 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
CALR-201ENST00000316448 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
CALR-201ENST00000316448 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
CALR-201ENST00000316448 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
CALR-201ENST00000316448 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
CALR-201ENST00000316448 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CALR-201ENST00000316448 LCE2BO14633 110 aa6.76□□□□□ -1.33
CALR-201ENST00000316448 MT1BP07438 61 aa6.76□□□□□ -1.33
CALR-201ENST00000316448 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
CALR-201ENST00000316448 USH2AO75445 5202 aa6.56□□□□□ -1.36
CALR-201ENST00000316448 MT1XP80297 61 aa6.53□□□□□ -1.36
CALR-201ENST00000316448 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
CALR-201ENST00000316448 TNP1P09430 55 aa6.48□□□□□ -1.37
CALR-201ENST00000316448 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
CALR-201ENST00000316448 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
CALR-201ENST00000316448 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
CALR-201ENST00000316448 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
CALR-201ENST00000316448 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
CALR-201ENST00000316448 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
CALR-201ENST00000316448 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
CALR-201ENST00000316448 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
CALR-201ENST00000316448 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
CALR-201ENST00000316448 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
CALR-201ENST00000316448 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
CALR-201ENST00000316448 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
CALR-201ENST00000316448 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
CALR-201ENST00000316448 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
CALR-201ENST00000316448 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
CALR-201ENST00000316448 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
CALR-201ENST00000316448 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CALR-201ENST00000316448 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
CALR-201ENST00000316448 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
CALR-201ENST00000316448 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
CALR-201ENST00000316448 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
CALR-201ENST00000316448 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.48
CALR-201ENST00000316448 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
CALR-201ENST00000316448 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CALR-201ENST00000316448 MT1EP04732 61 aa5.71□□□□□ -1.5
CALR-201ENST00000316448 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
CALR-201ENST00000316448 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
CALR-201ENST00000316448 MT1LQ93083 61 aa5.6□□□□□ -1.51
CALR-201ENST00000316448 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
CALR-201ENST00000316448 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CALR-201ENST00000316448 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
CALR-201ENST00000316448 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 456.5 ms