RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
TUBA3E-201ENST00000312988 CYSTM1Q9H1C7 97 aa7.56□□□□□ -1.2
TUBA3E-201ENST00000312988 ACYP2P14621 99 aa7.55□□□□□ -1.2
TUBA3E-201ENST00000312988 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
TUBA3E-201ENST00000312988 H7BZZ5 65 aa7.53□□□□□ -1.2
TUBA3E-201ENST00000312988 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
TUBA3E-201ENST00000312988 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
TUBA3E-201ENST00000312988 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.22
TUBA3E-201ENST00000312988 MT2AP02795 61 aa7.42□□□□□ -1.22
TUBA3E-201ENST00000312988 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
TUBA3E-201ENST00000312988 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
TUBA3E-201ENST00000312988 COA5Q86WW8 74 aa7.37□□□□□ -1.23
TUBA3E-201ENST00000312988 MT1FP04733 61 aa7.37□□□□□ -1.23
TUBA3E-201ENST00000312988 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
TUBA3E-201ENST00000312988 TMEM258P61165 79 aa7.33□□□□□ -1.24
TUBA3E-201ENST00000312988 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
TUBA3E-201ENST00000312988 H0YAA0 97 aa7.28□□□□□ -1.24
TUBA3E-201ENST00000312988 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
TUBA3E-201ENST00000312988 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
TUBA3E-201ENST00000312988 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
TUBA3E-201ENST00000312988 P0C880 135 aa7.15□□□□□ -1.27
TUBA3E-201ENST00000312988 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
TUBA3E-201ENST00000312988 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
TUBA3E-201ENST00000312988 SERP1Q9Y6X1 66 aa7.11□□□□□ -1.27
TUBA3E-201ENST00000312988 SEC61GP60059 68 aa7.1□□□□□ -1.27
TUBA3E-201ENST00000312988 LCE2BO14633 110 aa7.08□□□□□ -1.28
TUBA3E-201ENST00000312988 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
TUBA3E-201ENST00000312988 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
TUBA3E-201ENST00000312988 R4GN34 69 aa7.06□□□□□ -1.28
TUBA3E-201ENST00000312988 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
TUBA3E-201ENST00000312988 M0QZ58 72 aa7.03□□□□□ -1.28
TUBA3E-201ENST00000312988 A0A1B0GU69 56 aa7.01□□□□□ -1.29
TUBA3E-201ENST00000312988 USH2AO75445 5202 aa7.01□□□□□ -1.29
TUBA3E-201ENST00000312988 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.29
TUBA3E-201ENST00000312988 Q5VV11 94 aa6.96□□□□□ -1.3
TUBA3E-201ENST00000312988 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
TUBA3E-201ENST00000312988 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
TUBA3E-201ENST00000312988 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
TUBA3E-201ENST00000312988 CRCT1Q9UGL9 99 aa6.93□□□□□ -1.3
TUBA3E-201ENST00000312988 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
TUBA3E-201ENST00000312988 A0A1B0GU33 70 aa6.91□□□□□ -1.3
TUBA3E-201ENST00000312988 MT1BP07438 61 aa6.87□□□□□ -1.31
TUBA3E-201ENST00000312988 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
TUBA3E-201ENST00000312988 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
TUBA3E-201ENST00000312988 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
TUBA3E-201ENST00000312988 V9GYY9 64 aa6.85□□□□□ -1.31
TUBA3E-201ENST00000312988 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
TUBA3E-201ENST00000312988 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
TUBA3E-201ENST00000312988 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
TUBA3E-201ENST00000312988 Q1T7F1 81 aa6.8□□□□□ -1.32
TUBA3E-201ENST00000312988 A0A0D9SG42 100 aa6.76□□□□□ -1.33
TUBA3E-201ENST00000312988 PSPHP1O15172 72 aa6.76□□□□□ -1.33
TUBA3E-201ENST00000312988 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
TUBA3E-201ENST00000312988 A6NN06 94 aa6.71□□□□□ -1.33
TUBA3E-201ENST00000312988 UQCR11O14957 56 aa6.7□□□□□ -1.34
TUBA3E-201ENST00000312988 A8MU10 97 aa6.66□□□□□ -1.34
TUBA3E-201ENST00000312988 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
TUBA3E-201ENST00000312988 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
TUBA3E-201ENST00000312988 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
TUBA3E-201ENST00000312988 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
TUBA3E-201ENST00000312988 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
TUBA3E-201ENST00000312988 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
TUBA3E-201ENST00000312988 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
TUBA3E-201ENST00000312988 A6NED7 52 aa6.56□□□□□ -1.36
TUBA3E-201ENST00000312988 MT1XP80297 61 aa6.56□□□□□ -1.36
TUBA3E-201ENST00000312988 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
TUBA3E-201ENST00000312988 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
TUBA3E-201ENST00000312988 PRO0628Q9UI54 55 aa6.43□□□□□ -1.38
TUBA3E-201ENST00000312988 K7ERS5 55 aa6.41□□□□□ -1.38
TUBA3E-201ENST00000312988 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
TUBA3E-201ENST00000312988 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
TUBA3E-201ENST00000312988 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
TUBA3E-201ENST00000312988 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
TUBA3E-201ENST00000312988 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
TUBA3E-201ENST00000312988 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
TUBA3E-201ENST00000312988 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
TUBA3E-201ENST00000312988 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
TUBA3E-201ENST00000312988 TNP1P09430 55 aa6.17□□□□□ -1.42
TUBA3E-201ENST00000312988 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.43
TUBA3E-201ENST00000312988 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.43
TUBA3E-201ENST00000312988 KMT2DO14686 5537 aa6.14□□□□□ -1.43
TUBA3E-201ENST00000312988 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
TUBA3E-201ENST00000312988 KRTAP6-3Q3LI67 103 aa6.11□□□□□ -1.43
TUBA3E-201ENST00000312988 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
TUBA3E-201ENST00000312988 H3BS24 57 aa6.04□□□□□ -1.44
TUBA3E-201ENST00000312988 ROMO1P60602 79 aa6.04□□□□□ -1.44
TUBA3E-201ENST00000312988 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
TUBA3E-201ENST00000312988 KRTAP5-9P26371 169 aa6□□□□□ -1.45
TUBA3E-201ENST00000312988 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
TUBA3E-201ENST00000312988 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
TUBA3E-201ENST00000312988 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
TUBA3E-201ENST00000312988 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
TUBA3E-201ENST00000312988 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
TUBA3E-201ENST00000312988 NEBP20929 6669 aa5.84□□□□□ -1.47
TUBA3E-201ENST00000312988 SPRR2EP22531 72 aa5.81□□□□□ -1.48
TUBA3E-201ENST00000312988 SPRR2BP35325 72 aa5.81□□□□□ -1.48
TUBA3E-201ENST00000312988 SPRR2AP35326 72 aa5.81□□□□□ -1.48
TUBA3E-201ENST00000312988 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
TUBA3E-201ENST00000312988 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
TUBA3E-201ENST00000312988 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms