RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NDUFC1O43677 76 aa8.52□□□□□ -1.05
SSSCA1-201ENST00000309328 MT2AP02795 61 aa8.51□□□□□ -1.05
SSSCA1-201ENST00000309328 SPANXA2-OT1Q8N9U9 137 aa8.5□□□□□ -1.05
SSSCA1-201ENST00000309328 ANAPC13Q9BS18 74 aa8.49□□□□□ -1.05
SSSCA1-201ENST00000309328 ACYP2P14621 99 aa8.47□□□□□ -1.05
SSSCA1-201ENST00000309328 KRTAP10-10P60014 251 aa8.47□□□□□ -1.05
SSSCA1-201ENST00000309328 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
SSSCA1-201ENST00000309328 MT1FP04733 61 aa8.43□□□□□ -1.06
SSSCA1-201ENST00000309328 H0YAA0 97 aa8.35□□□□□ -1.07
SSSCA1-201ENST00000309328 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
SSSCA1-201ENST00000309328 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
SSSCA1-201ENST00000309328 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
SSSCA1-201ENST00000309328 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
SSSCA1-201ENST00000309328 H7BZZ5 65 aa8.3□□□□□ -1.08
SSSCA1-201ENST00000309328 FSIP2Q5CZC0 6907 aa8.26□□□□□ -1.09
SSSCA1-201ENST00000309328 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
SSSCA1-201ENST00000309328 CCDC179H3BU77 68 aa8.21□□□□□ -1.1
SSSCA1-201ENST00000309328 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
SSSCA1-201ENST00000309328 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
SSSCA1-201ENST00000309328 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
SSSCA1-201ENST00000309328 COA5Q86WW8 74 aa8.16□□□□□ -1.1
SSSCA1-201ENST00000309328 LCE2BO14633 110 aa8.13□□□□□ -1.11
SSSCA1-201ENST00000309328 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
SSSCA1-201ENST00000309328 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
SSSCA1-201ENST00000309328 TMEM258P61165 79 aa8.06□□□□□ -1.12
SSSCA1-201ENST00000309328 USH2AO75445 5202 aa8.03□□□□□ -1.12
SSSCA1-201ENST00000309328 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
SSSCA1-201ENST00000309328 P0C880 135 aa8□□□□□ -1.13
SSSCA1-201ENST00000309328 R4GN34 69 aa8□□□□□ -1.13
SSSCA1-201ENST00000309328 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
SSSCA1-201ENST00000309328 Q5VV11 94 aa7.97□□□□□ -1.13
SSSCA1-201ENST00000309328 SEC61GP60059 68 aa7.96□□□□□ -1.14
SSSCA1-201ENST00000309328 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
SSSCA1-201ENST00000309328 M0QZ58 72 aa7.91□□□□□ -1.14
SSSCA1-201ENST00000309328 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
SSSCA1-201ENST00000309328 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
SSSCA1-201ENST00000309328 MT1BP07438 61 aa7.85□□□□□ -1.15
SSSCA1-201ENST00000309328 PCP4P48539 62 aa7.79□□□□□ -1.16
SSSCA1-201ENST00000309328 A0A1B0GU69 56 aa7.78□□□□□ -1.16
SSSCA1-201ENST00000309328 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
SSSCA1-201ENST00000309328 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
SSSCA1-201ENST00000309328 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
SSSCA1-201ENST00000309328 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
SSSCA1-201ENST00000309328 A0A1B0GU33 70 aa7.7□□□□□ -1.18
SSSCA1-201ENST00000309328 A6NN06 94 aa7.7□□□□□ -1.18
SSSCA1-201ENST00000309328 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
SSSCA1-201ENST00000309328 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
SSSCA1-201ENST00000309328 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
SSSCA1-201ENST00000309328 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
SSSCA1-201ENST00000309328 PRO2289Q9P1D8 64 aa7.64□□□□□ -1.19
SSSCA1-201ENST00000309328 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
SSSCA1-201ENST00000309328 V9GYY9 64 aa7.61□□□□□ -1.19
SSSCA1-201ENST00000309328 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
SSSCA1-201ENST00000309328 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
SSSCA1-201ENST00000309328 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
SSSCA1-201ENST00000309328 MT1XP80297 61 aa7.49□□□□□ -1.21
SSSCA1-201ENST00000309328 Q1T7F1 81 aa7.49□□□□□ -1.21
SSSCA1-201ENST00000309328 A0A0D9SG42 100 aa7.47□□□□□ -1.21
SSSCA1-201ENST00000309328 UQCR11O14957 56 aa7.46□□□□□ -1.22
SSSCA1-201ENST00000309328 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
SSSCA1-201ENST00000309328 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
SSSCA1-201ENST00000309328 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
SSSCA1-201ENST00000309328 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
SSSCA1-201ENST00000309328 PSPHP1O15172 72 aa7.33□□□□□ -1.24
SSSCA1-201ENST00000309328 A8MU10 97 aa7.32□□□□□ -1.24
SSSCA1-201ENST00000309328 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
SSSCA1-201ENST00000309328 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
SSSCA1-201ENST00000309328 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
SSSCA1-201ENST00000309328 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
SSSCA1-201ENST00000309328 A6NED7 52 aa7.18□□□□□ -1.26
SSSCA1-201ENST00000309328 K7ERS5 55 aa7.18□□□□□ -1.26
SSSCA1-201ENST00000309328 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
SSSCA1-201ENST00000309328 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
SSSCA1-201ENST00000309328 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
SSSCA1-201ENST00000309328 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
SSSCA1-201ENST00000309328 TNP1P09430 55 aa6.98□□□□□ -1.29
SSSCA1-201ENST00000309328 KMT2DO14686 5537 aa6.98□□□□□ -1.29
SSSCA1-201ENST00000309328 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
SSSCA1-201ENST00000309328 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
SSSCA1-201ENST00000309328 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
SSSCA1-201ENST00000309328 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
SSSCA1-201ENST00000309328 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
SSSCA1-201ENST00000309328 NEBP20929 6669 aa6.88□□□□□ -1.31
SSSCA1-201ENST00000309328 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
SSSCA1-201ENST00000309328 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
SSSCA1-201ENST00000309328 KRTAP20-1Q3LI63 56 aa6.75□□□□□ -1.33
SSSCA1-201ENST00000309328 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
SSSCA1-201ENST00000309328 SPRR2EP22531 72 aa6.7□□□□□ -1.34
SSSCA1-201ENST00000309328 SPRR2BP35325 72 aa6.7□□□□□ -1.34
SSSCA1-201ENST00000309328 SPRR2AP35326 72 aa6.7□□□□□ -1.34
SSSCA1-201ENST00000309328 ROMO1P60602 79 aa6.68□□□□□ -1.34
SSSCA1-201ENST00000309328 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
SSSCA1-201ENST00000309328 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
SSSCA1-201ENST00000309328 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
SSSCA1-201ENST00000309328 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SSSCA1-201ENST00000309328 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
SSSCA1-201ENST00000309328 MT1EP04732 61 aa6.62□□□□□ -1.35
SSSCA1-201ENST00000309328 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
SSSCA1-201ENST00000309328 KRTAP2-3P0C7H8 128 aa6.55□□□□□ -1.36
SSSCA1-201ENST00000309328 KRTAP2-4Q9BYR9 128 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms