RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 CSAG1Q6PB30 78 aa12.27□□□□□ -0.45
POLR1D-201ENST00000302979 A8MUN3 132 aa12.25□□□□□ -0.45
POLR1D-201ENST00000302979 LCE2BO14633 110 aa12.25□□□□□ -0.45
POLR1D-201ENST00000302979 USH2AO75445 5202 aa12.2□□□□□ -0.46
POLR1D-201ENST00000302979 DMAC1Q96GE9 116 aa12.1□□□□□ -0.47
POLR1D-201ENST00000302979 NDUFC1O43677 76 aa12.06□□□□□ -0.48
POLR1D-201ENST00000302979 SERP2Q8N6R1 65 aa12.02□□□□□ -0.49
POLR1D-201ENST00000302979 SSPOA2VEC9 5147 aa12.02□□□□□ -0.49
POLR1D-201ENST00000302979 SNURFQ9Y675 71 aa12□□□□□ -0.49
POLR1D-201ENST00000302979 KRTAP19-1Q8IUB9 90 aa11.96□□□□□ -0.49
POLR1D-201ENST00000302979 C20orf197Q8N268 126 aa11.93□□□□□ -0.5
POLR1D-201ENST00000302979 H0YAA0 97 aa11.91□□□□□ -0.5
POLR1D-201ENST00000302979 SPRR2GQ9BYE4 73 aa11.85□□□□□ -0.51
POLR1D-201ENST00000302979 ACYP2P14621 99 aa11.81□□□□□ -0.52
POLR1D-201ENST00000302979 COX7CP15954 63 aa11.78□□□□□ -0.52
POLR1D-201ENST00000302979 SPANXA2-OT1Q8N9U9 137 aa11.78□□□□□ -0.52
POLR1D-201ENST00000302979 ADM2Q7Z4H4 148 aa11.77□□□□□ -0.53
POLR1D-201ENST00000302979 KRTAP19-6Q3LI70 58 aa11.74□□□□□ -0.53
POLR1D-201ENST00000302979 CRIPTQ9P021 101 aa11.74□□□□□ -0.53
POLR1D-201ENST00000302979 KRTAP19-8Q3LI54 63 aa11.72□□□□□ -0.53
POLR1D-201ENST00000302979 MT1BP07438 61 aa11.68□□□□□ -0.54
POLR1D-201ENST00000302979 FCGBPQ9Y6R7 5405 aaPredicted RBP11.66□□□□□ -0.54
POLR1D-201ENST00000302979 Q5VV11 94 aa11.62□□□□□ -0.55
POLR1D-201ENST00000302979 CYSTM1Q9H1C7 97 aa11.62□□□□□ -0.55
POLR1D-201ENST00000302979 P0C880 135 aa11.6□□□□□ -0.55
POLR1D-201ENST00000302979 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
POLR1D-201ENST00000302979 CHKB-CPT1BH3BT56 60 aa11.58□□□□□ -0.56
POLR1D-201ENST00000302979 ANAPC13Q9BS18 74 aa11.57□□□□□ -0.56
POLR1D-201ENST00000302979 H7BZZ5 65 aa11.55□□□□□ -0.56
POLR1D-201ENST00000302979 SPTSSBQ8NFR3 76 aa11.55□□□□□ -0.56
POLR1D-201ENST00000302979 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.46□□□□□ -0.57
POLR1D-201ENST00000302979 COA5Q86WW8 74 aa11.43□□□□□ -0.58
POLR1D-201ENST00000302979 R4GN34 69 aa11.41□□□□□ -0.58
POLR1D-201ENST00000302979 CCDC179H3BU77 68 aa11.37□□□□□ -0.59
POLR1D-201ENST00000302979 M0QZ58 72 aa11.36□□□□□ -0.59
POLR1D-201ENST00000302979 A6NN06 94 aa11.3□□□□□ -0.6
POLR1D-201ENST00000302979 KRTAP10-5P60370 271 aa11.29□□□□□ -0.6
POLR1D-201ENST00000302979 KRTAP9-7A8MTY7 169 aa11.17□□□□□ -0.62
POLR1D-201ENST00000302979 MACF1Q9UPN3 7388 aaKnown RBP11.16□□□□□ -0.62
POLR1D-201ENST00000302979 LINC01554Q52M75 96 aa11.15□□□□□ -0.62
POLR1D-201ENST00000302979 PLAC4Q8WY50 150 aa11.11□□□□□ -0.63
POLR1D-201ENST00000302979 ATP5EP56381 51 aaPredicted RBP11.05□□□□□ -0.64
POLR1D-201ENST00000302979 MT1XP80297 61 aa11.05□□□□□ -0.64
POLR1D-201ENST00000302979 KRTAP13-4Q3LI77 160 aa11.05□□□□□ -0.64
POLR1D-201ENST00000302979 SEC61GP60059 68 aa10.97□□□□□ -0.65
POLR1D-201ENST00000302979 PRO2289Q9P1D8 64 aa10.95□□□□□ -0.66
POLR1D-201ENST00000302979 SERP1Q9Y6X1 66 aa10.95□□□□□ -0.66
POLR1D-201ENST00000302979 TMEM258P61165 79 aa10.94□□□□□ -0.66
POLR1D-201ENST00000302979 SYNE2Q8WXH0 6885 aaKnown RBP10.93□□□□□ -0.66
POLR1D-201ENST00000302979 KRTAP6-3Q3LI67 103 aa10.83□□□□□ -0.68
POLR1D-201ENST00000302979 A0A1B0GU33 70 aa10.8□□□□□ -0.68
POLR1D-201ENST00000302979 A0A1B0GU69 56 aa10.8□□□□□ -0.68
POLR1D-201ENST00000302979 SPATA8Q6RVD6 105 aa10.76□□□□□ -0.69
POLR1D-201ENST00000302979 KRTAP12-2P59991 146 aa10.68□□□□□ -0.7
POLR1D-201ENST00000302979 A0A0D9SG42 100 aa10.66□□□□□ -0.7
POLR1D-201ENST00000302979 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
POLR1D-201ENST00000302979 KMT2DO14686 5537 aa10.56□□□□□ -0.72
POLR1D-201ENST00000302979 KRTAP5-9P26371 169 aa10.56□□□□□ -0.72
POLR1D-201ENST00000302979 KRTAP10-7P60409 375 aaPredicted RBP10.56□□□□□ -0.72
POLR1D-201ENST00000302979 PRR15LQ9BU68 103 aa10.56□□□□□ -0.72
POLR1D-201ENST00000302979 KRTAP12-1P59990 96 aa10.53□□□□□ -0.72
POLR1D-201ENST00000302979 CAMK2N1Q7Z7J9 78 aa10.53□□□□□ -0.72
POLR1D-201ENST00000302979 KRTAP10-12P60413 245 aa10.49□□□□□ -0.73
POLR1D-201ENST00000302979 SMIM26A0A096LP01 95 aa10.47□□□□□ -0.73
POLR1D-201ENST00000302979 A8MU10 97 aa10.47□□□□□ -0.73
POLR1D-201ENST00000302979 SPINT4Q6UDR6 99 aa10.47□□□□□ -0.73
POLR1D-201ENST00000302979 KRTAP4-8A0A0G2JLE6 195 aa10.43□□□□□ -0.74
POLR1D-201ENST00000302979 KRTAP4-8Q9BYQ9 185 aa10.43□□□□□ -0.74
POLR1D-201ENST00000302979 MUC12Q9UKN1 5478 aa10.4□□□□□ -0.74
POLR1D-201ENST00000302979 KRTAP8-1Q8IUC2 63 aa10.39□□□□□ -0.75
POLR1D-201ENST00000302979 PCP4P48539 62 aa10.36□□□□□ -0.75
POLR1D-201ENST00000302979 SPRR2FQ96RM1 72 aa10.3□□□□□ -0.76
POLR1D-201ENST00000302979 UQCR11O14957 56 aa10.25□□□□□ -0.77
POLR1D-201ENST00000302979 NEBP20929 6669 aa10.22□□□□□ -0.77
POLR1D-201ENST00000302979 Q1T7F1 81 aa10.22□□□□□ -0.77
POLR1D-201ENST00000302979 V9GYY9 64 aa10.21□□□□□ -0.77
POLR1D-201ENST00000302979 MDN1Q9NU22 5596 aa10.17□□□□□ -0.78
POLR1D-201ENST00000302979 PSPHP1O15172 72 aa10.13□□□□□ -0.79
POLR1D-201ENST00000302979 MIR22HGQ0VDD5 57 aa10.07□□□□□ -0.8
POLR1D-201ENST00000302979 SPRR2EP22531 72 aa10.05□□□□□ -0.8
POLR1D-201ENST00000302979 SPRR2BP35325 72 aa10.05□□□□□ -0.8
POLR1D-201ENST00000302979 SPRR2AP35326 72 aa10.05□□□□□ -0.8
POLR1D-201ENST00000302979 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
POLR1D-201ENST00000302979 C10orf95Q9H7T3 257 aa10.03□□□□□ -0.8
POLR1D-201ENST00000302979 LCE1AQ5T7P2 110 aa10.02□□□□□ -0.81
POLR1D-201ENST00000302979 KRTAP19-7Q3SYF9 63 aa9.89□□□□□ -0.83
POLR1D-201ENST00000302979 TNP1P09430 55 aa9.84□□□□□ -0.83
POLR1D-201ENST00000302979 KRTAP20-1Q3LI63 56 aa9.81□□□□□ -0.84
POLR1D-201ENST00000302979 A6NED7 52 aa9.78□□□□□ -0.84
POLR1D-201ENST00000302979 MT1EP04732 61 aa9.76□□□□□ -0.85
POLR1D-201ENST00000302979 K7ERS5 55 aa9.72□□□□□ -0.85
POLR1D-201ENST00000302979 LCE3AQ5TA76 89 aa9.72□□□□□ -0.85
POLR1D-201ENST00000302979 KRTAP19-5Q3LI72 72 aa9.71□□□□□ -0.86
POLR1D-201ENST00000302979 SPRR2DP22532 72 aa9.69□□□□□ -0.86
POLR1D-201ENST00000302979 KRTAP2-3P0C7H8 128 aa9.66□□□□□ -0.86
POLR1D-201ENST00000302979 KRTAP2-4Q9BYR9 128 aa9.66□□□□□ -0.86
POLR1D-201ENST00000302979 KRTAP19-3Q7Z4W3 81 aa9.58□□□□□ -0.88
POLR1D-201ENST00000302979 LCE5AQ5TCM9 118 aa9.55□□□□□ -0.88
POLR1D-201ENST00000302979 KRTAP25-1Q3LHN0 102 aa9.51□□□□□ -0.89
POLR1D-201ENST00000302979 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms