RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
CLP1-201ENST00000302731 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
CLP1-201ENST00000302731 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CLP1-201ENST00000302731 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
CLP1-201ENST00000302731 PSPHP1O15172 72 aa5.48□□□□□ -1.53
CLP1-201ENST00000302731 Q5VV11 94 aa5.46□□□□□ -1.54
CLP1-201ENST00000302731 SPTSSBQ8NFR3 76 aa5.46□□□□□ -1.54
CLP1-201ENST00000302731 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
CLP1-201ENST00000302731 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
CLP1-201ENST00000302731 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
CLP1-201ENST00000302731 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
CLP1-201ENST00000302731 LRP2P98164 4655 aa5.4□□□□□ -1.55
CLP1-201ENST00000302731 A0A1B0GU69 56 aa5.38□□□□□ -1.55
CLP1-201ENST00000302731 LPAP08519 4548 aa5.38□□□□□ -1.55
CLP1-201ENST00000302731 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
CLP1-201ENST00000302731 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
CLP1-201ENST00000302731 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
CLP1-201ENST00000302731 SEC61GP60059 68 aa5.34□□□□□ -1.56
CLP1-201ENST00000302731 PRO0628Q9UI54 55 aa5.34□□□□□ -1.56
CLP1-201ENST00000302731 A6NED7 52 aa5.33□□□□□ -1.56
CLP1-201ENST00000302731 S4R3F8 94 aa5.33□□□□□ -1.56
CLP1-201ENST00000302731 LCA10Q71F78 164 aa5.31□□□□□ -1.56
CLP1-201ENST00000302731 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
CLP1-201ENST00000302731 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
CLP1-201ENST00000302731 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
CLP1-201ENST00000302731 LCE2BO14633 110 aa5.26□□□□□ -1.57
CLP1-201ENST00000302731 UQCR11O14957 56 aa5.26□□□□□ -1.57
CLP1-201ENST00000302731 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
CLP1-201ENST00000302731 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
CLP1-201ENST00000302731 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
CLP1-201ENST00000302731 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
CLP1-201ENST00000302731 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
CLP1-201ENST00000302731 A8MU10 97 aa5.19□□□□□ -1.58
CLP1-201ENST00000302731 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
CLP1-201ENST00000302731 HERC1Q15751 4861 aa5.19□□□□□ -1.58
CLP1-201ENST00000302731 A0A1B0GU33 70 aa5.19□□□□□ -1.58
CLP1-201ENST00000302731 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
CLP1-201ENST00000302731 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
CLP1-201ENST00000302731 H0YAA0 97 aa5.15□□□□□ -1.59
CLP1-201ENST00000302731 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
CLP1-201ENST00000302731 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
CLP1-201ENST00000302731 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
CLP1-201ENST00000302731 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
CLP1-201ENST00000302731 P0C880 135 aa5.08□□□□□ -1.6
CLP1-201ENST00000302731 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CLP1-201ENST00000302731 A6NN06 94 aa5.04□□□□□ -1.6
CLP1-201ENST00000302731 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
CLP1-201ENST00000302731 M0QZ58 72 aa5.01□□□□□ -1.61
CLP1-201ENST00000302731 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
CLP1-201ENST00000302731 FLGP20930 4061 aaPredicted RBP4.99□□□□□ -1.61
CLP1-201ENST00000302731 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
CLP1-201ENST00000302731 MUC2Q02817 5179 aa4.98□□□□□ -1.61
CLP1-201ENST00000302731 K7ERS5 55 aa4.96□□□□□ -1.62
CLP1-201ENST00000302731 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CLP1-201ENST00000302731 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
CLP1-201ENST00000302731 R4GN34 69 aa4.91□□□□□ -1.62
CLP1-201ENST00000302731 A0A0D9SG42 100 aa4.9□□□□□ -1.62
CLP1-201ENST00000302731 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.63
CLP1-201ENST00000302731 MT1HP80294 61 aa4.88□□□□□ -1.63
CLP1-201ENST00000302731 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
CLP1-201ENST00000302731 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
CLP1-201ENST00000302731 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
CLP1-201ENST00000302731 M0R2T5 61 aa4.83□□□□□ -1.64
CLP1-201ENST00000302731 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
CLP1-201ENST00000302731 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
CLP1-201ENST00000302731 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
CLP1-201ENST00000302731 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
CLP1-201ENST00000302731 ROMO1P60602 79 aa4.76□□□□□ -1.65
CLP1-201ENST00000302731 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
CLP1-201ENST00000302731 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
CLP1-201ENST00000302731 MT2AP02795 61 aa4.72□□□□□ -1.65
CLP1-201ENST00000302731 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
CLP1-201ENST00000302731 MT1FP04733 61 aa4.68□□□□□ -1.66
CLP1-201ENST00000302731 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
CLP1-201ENST00000302731 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
CLP1-201ENST00000302731 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
CLP1-201ENST00000302731 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
CLP1-201ENST00000302731 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
CLP1-201ENST00000302731 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
CLP1-201ENST00000302731 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
CLP1-201ENST00000302731 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
CLP1-201ENST00000302731 MT1BP07438 61 aa4.48□□□□□ -1.69
CLP1-201ENST00000302731 TNP1P09430 55 aa4.43□□□□□ -1.7
CLP1-201ENST00000302731 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
CLP1-201ENST00000302731 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
CLP1-201ENST00000302731 MT1XP80297 61 aa4.36□□□□□ -1.71
CLP1-201ENST00000302731 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CLP1-201ENST00000302731 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
CLP1-201ENST00000302731 USH2AO75445 5202 aa4.19□□□□□ -1.74
CLP1-201ENST00000302731 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
CLP1-201ENST00000302731 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
CLP1-201ENST00000302731 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
CLP1-201ENST00000302731 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
CLP1-201ENST00000302731 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
CLP1-201ENST00000302731 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
CLP1-201ENST00000302731 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
CLP1-201ENST00000302731 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
CLP1-201ENST00000302731 A0A0A0MQY5 61 aa4.03□□□□□ -1.77
CLP1-201ENST00000302731 H3BS24 57 aa4.03□□□□□ -1.77
CLP1-201ENST00000302731 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms