RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
SMCO4-201ENST00000298966 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
SMCO4-201ENST00000298966 SSPOA2VEC9 5147 aa10.88□□□□□ -0.67
SMCO4-201ENST00000298966 SPINK7P58062 85 aa10.88□□□□□ -0.67
SMCO4-201ENST00000298966 USH2AO75445 5202 aa10.86□□□□□ -0.67
SMCO4-201ENST00000298966 HRES1P13985 223 aa10.8□□□□□ -0.68
SMCO4-201ENST00000298966 FCGBPQ9Y6R7 5405 aaPredicted RBP10.72□□□□□ -0.69
SMCO4-201ENST00000298966 SERP1Q9Y6X1 66 aa10.72□□□□□ -0.69
SMCO4-201ENST00000298966 RPS28P62857 69 aaKnown RBP10.7□□□□□ -0.7
SMCO4-201ENST00000298966 A8MUN3 132 aa10.68□□□□□ -0.7
SMCO4-201ENST00000298966 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
SMCO4-201ENST00000298966 KRTAP9-8Q9BYQ0 159 aa10.64□□□□□ -0.71
SMCO4-201ENST00000298966 C4orf26Q17RF5 130 aa10.62□□□□□ -0.71
SMCO4-201ENST00000298966 ACYP2P14621 99 aa10.6□□□□□ -0.71
SMCO4-201ENST00000298966 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
SMCO4-201ENST00000298966 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
SMCO4-201ENST00000298966 MACF1Q9UPN3 7388 aaKnown RBP10.55□□□□□ -0.72
SMCO4-201ENST00000298966 COA5Q86WW8 74 aa10.55□□□□□ -0.72
SMCO4-201ENST00000298966 KRTAP19-1Q8IUB9 90 aa10.55□□□□□ -0.72
SMCO4-201ENST00000298966 SYNE2Q8WXH0 6885 aaKnown RBP10.54□□□□□ -0.72
SMCO4-201ENST00000298966 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
SMCO4-201ENST00000298966 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
SMCO4-201ENST00000298966 LCE2BO14633 110 aa10.43□□□□□ -0.74
SMCO4-201ENST00000298966 MT2AP02795 61 aa10.43□□□□□ -0.74
SMCO4-201ENST00000298966 H1FX-AS1Q4G0G2 97 aa10.41□□□□□ -0.74
SMCO4-201ENST00000298966 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
SMCO4-201ENST00000298966 MT1FP04733 61 aa10.34□□□□□ -0.75
SMCO4-201ENST00000298966 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
SMCO4-201ENST00000298966 KRTAP9-3Q9BYQ3 159 aa10.32□□□□□ -0.76
SMCO4-201ENST00000298966 KRTAP10-10P60014 251 aa10.31□□□□□ -0.76
SMCO4-201ENST00000298966 S4R3F8 94 aa10.29□□□□□ -0.76
SMCO4-201ENST00000298966 V9GYY9 64 aa10.24□□□□□ -0.77
SMCO4-201ENST00000298966 Q1T7F1 81 aa10.23□□□□□ -0.77
SMCO4-201ENST00000298966 LCA10Q71F78 164 aa10.19□□□□□ -0.78
SMCO4-201ENST00000298966 KRTAP19-6Q3LI70 58 aa10.18□□□□□ -0.78
SMCO4-201ENST00000298966 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
SMCO4-201ENST00000298966 KRTAP6-3Q3LI67 103 aa10.14□□□□□ -0.79
SMCO4-201ENST00000298966 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
SMCO4-201ENST00000298966 PRR15LQ9BU68 103 aa10.01□□□□□ -0.81
SMCO4-201ENST00000298966 NEBP20929 6669 aa10.01□□□□□ -0.81
SMCO4-201ENST00000298966 A0A1B0GU69 56 aa9.97□□□□□ -0.81
SMCO4-201ENST00000298966 PSPHP1O15172 72 aa9.97□□□□□ -0.81
SMCO4-201ENST00000298966 SEC61GP60059 68 aa9.97□□□□□ -0.81
SMCO4-201ENST00000298966 H0YAA0 97 aa9.93□□□□□ -0.82
SMCO4-201ENST00000298966 Q5VV11 94 aa9.93□□□□□ -0.82
SMCO4-201ENST00000298966 MUC12Q9UKN1 5478 aa9.75□□□□□ -0.85
SMCO4-201ENST00000298966 ADM2Q7Z4H4 148 aa9.75□□□□□ -0.85
SMCO4-201ENST00000298966 KRTAP20-1Q3LI63 56 aa9.72□□□□□ -0.85
SMCO4-201ENST00000298966 A6NED7 52 aa9.7□□□□□ -0.86
SMCO4-201ENST00000298966 UQCR11O14957 56 aa9.69□□□□□ -0.86
SMCO4-201ENST00000298966 A0A1B0GU33 70 aa9.68□□□□□ -0.86
SMCO4-201ENST00000298966 P0C880 135 aa9.65□□□□□ -0.86
SMCO4-201ENST00000298966 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
SMCO4-201ENST00000298966 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
SMCO4-201ENST00000298966 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
SMCO4-201ENST00000298966 M0QZ58 72 aa9.56□□□□□ -0.88
SMCO4-201ENST00000298966 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
SMCO4-201ENST00000298966 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
SMCO4-201ENST00000298966 A6NN06 94 aa9.52□□□□□ -0.89
SMCO4-201ENST00000298966 R4GN34 69 aa9.48□□□□□ -0.89
SMCO4-201ENST00000298966 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
SMCO4-201ENST00000298966 MDN1Q9NU22 5596 aa9.41□□□□□ -0.9
SMCO4-201ENST00000298966 A8MU10 97 aa9.4□□□□□ -0.9
SMCO4-201ENST00000298966 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
SMCO4-201ENST00000298966 KMT2DO14686 5537 aa9.38□□□□□ -0.91
SMCO4-201ENST00000298966 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
SMCO4-201ENST00000298966 MT1BP07438 61 aa9.31□□□□□ -0.92
SMCO4-201ENST00000298966 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
SMCO4-201ENST00000298966 KRTAP2-3P0C7H8 128 aa9.29□□□□□ -0.92
SMCO4-201ENST00000298966 KRTAP2-4Q9BYR9 128 aa9.29□□□□□ -0.92
SMCO4-201ENST00000298966 KRTAP10-5P60370 271 aa9.25□□□□□ -0.93
SMCO4-201ENST00000298966 A0A0D9SG42 100 aa9.24□□□□□ -0.93
SMCO4-201ENST00000298966 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
SMCO4-201ENST00000298966 LINC01554Q52M75 96 aa9.18□□□□□ -0.94
SMCO4-201ENST00000298966 K7ERS5 55 aa9.17□□□□□ -0.94
SMCO4-201ENST00000298966 KRTAP12-1P59990 96 aa9.13□□□□□ -0.95
SMCO4-201ENST00000298966 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
SMCO4-201ENST00000298966 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SMCO4-201ENST00000298966 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
SMCO4-201ENST00000298966 SPRR2EP22531 72 aa9□□□□□ -0.97
SMCO4-201ENST00000298966 SPRR2BP35325 72 aa9□□□□□ -0.97
SMCO4-201ENST00000298966 SPRR2AP35326 72 aa9□□□□□ -0.97
SMCO4-201ENST00000298966 PLAC4Q8WY50 150 aa9□□□□□ -0.97
SMCO4-201ENST00000298966 SPRR2FQ96RM1 72 aa8.97□□□□□ -0.97
SMCO4-201ENST00000298966 KRTAP2-2Q9BYT5 123 aa8.95□□□□□ -0.98
SMCO4-201ENST00000298966 KRTAP2-1Q9BYU5 128 aa8.95□□□□□ -0.98
SMCO4-201ENST00000298966 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
SMCO4-201ENST00000298966 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
SMCO4-201ENST00000298966 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
SMCO4-201ENST00000298966 ROMO1P60602 79 aa8.77□□□□□ -1.01
SMCO4-201ENST00000298966 LCE1AQ5T7P2 110 aa8.76□□□□□ -1.01
SMCO4-201ENST00000298966 KRTAP8-1Q8IUC2 63 aa8.73□□□□□ -1.01
SMCO4-201ENST00000298966 SPRR2DP22532 72 aa8.72□□□□□ -1.01
SMCO4-201ENST00000298966 KTN1-AS1Q86SY8 53 aa8.7□□□□□ -1.02
SMCO4-201ENST00000298966 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
SMCO4-201ENST00000298966 GPR98Q8WXG9 6306 aa8.66□□□□□ -1.02
SMCO4-201ENST00000298966 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
SMCO4-201ENST00000298966 MT1XP80297 61 aa8.57□□□□□ -1.04
SMCO4-201ENST00000298966 LCE3BQ5TA77 95 aa8.53□□□□□ -1.04
SMCO4-201ENST00000298966 SVIPQ8NHG7 77 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms