RNA–Protein interactions for RNA: ENST00000296615.10

RNF180-201, Transcript of ring finger protein 180, humanhuman

TSL 1 (best) BASIC

Gene RNF180, Length 1,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180-201ENST00000296615 S4R3F8 94 aa10.73□□□□□ -0.69
RNF180-201ENST00000296615 LCA10Q71F78 164 aa10.72□□□□□ -0.69
RNF180-201ENST00000296615 PSPHP1O15172 72 aa10.7□□□□□ -0.7
RNF180-201ENST00000296615 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
RNF180-201ENST00000296615 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
RNF180-201ENST00000296615 KRTAP19-2Q3LHN2 52 aa10.64□□□□□ -0.71
RNF180-201ENST00000296615 Q5VV11 94 aa10.61□□□□□ -0.71
RNF180-201ENST00000296615 A0A1B0GU69 56 aa10.59□□□□□ -0.71
RNF180-201ENST00000296615 MUC2Q02817 5179 aa10.54□□□□□ -0.72
RNF180-201ENST00000296615 SEC61GP60059 68 aa10.52□□□□□ -0.73
RNF180-201ENST00000296615 CSAG1Q6PB30 78 aa10.5□□□□□ -0.73
RNF180-201ENST00000296615 UBR4Q5T4S7 5183 aa10.49□□□□□ -0.73
RNF180-201ENST00000296615 RNF213Q63HN8 5207 aa10.46□□□□□ -0.73
RNF180-201ENST00000296615 A6NED7 52 aa10.37□□□□□ -0.75
RNF180-201ENST00000296615 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
RNF180-201ENST00000296615 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
RNF180-201ENST00000296615 KRTAP10-6P60371 365 aaPredicted RBP10.32□□□□□ -0.76
RNF180-201ENST00000296615 FLGP20930 4061 aaPredicted RBP10.3□□□□□ -0.76
RNF180-201ENST00000296615 H0YAA0 97 aa10.29□□□□□ -0.76
RNF180-201ENST00000296615 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
RNF180-201ENST00000296615 UQCR11O14957 56 aa10.28□□□□□ -0.76
RNF180-201ENST00000296615 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.76
RNF180-201ENST00000296615 A0A1B0GU33 70 aa10.27□□□□□ -0.77
RNF180-201ENST00000296615 P0C880 135 aa10.22□□□□□ -0.77
RNF180-201ENST00000296615 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
RNF180-201ENST00000296615 SPATA8Q6RVD6 105 aa10.18□□□□□ -0.78
RNF180-201ENST00000296615 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
RNF180-201ENST00000296615 A8MU10 97 aa10.15□□□□□ -0.78
RNF180-201ENST00000296615 MT1HP80294 61 aa10.14□□□□□ -0.79
RNF180-201ENST00000296615 FAT4Q6V0I7 4981 aa10.11□□□□□ -0.79
RNF180-201ENST00000296615 PRO0628Q9UI54 55 aa10.09□□□□□ -0.79
RNF180-201ENST00000296615 M0R2T5 61 aa10.04□□□□□ -0.8
RNF180-201ENST00000296615 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
RNF180-201ENST00000296615 M0QZ58 72 aa9.98□□□□□ -0.81
RNF180-201ENST00000296615 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
RNF180-201ENST00000296615 R4GN34 69 aa9.89□□□□□ -0.83
RNF180-201ENST00000296615 A0A0D9SG42 100 aa9.85□□□□□ -0.83
RNF180-201ENST00000296615 CRIPTQ9P021 101 aa9.82□□□□□ -0.84
RNF180-201ENST00000296615 KRTAP9-8Q9BYQ0 159 aa9.79□□□□□ -0.84
RNF180-201ENST00000296615 MT2AP02795 61 aa9.76□□□□□ -0.85
RNF180-201ENST00000296615 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
RNF180-201ENST00000296615 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
RNF180-201ENST00000296615 K7ERS5 55 aa9.7□□□□□ -0.86
RNF180-201ENST00000296615 MT1FP04733 61 aa9.7□□□□□ -0.86
RNF180-201ENST00000296615 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
RNF180-201ENST00000296615 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
RNF180-201ENST00000296615 A6NN06 94 aa9.68□□□□□ -0.86
RNF180-201ENST00000296615 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
RNF180-201ENST00000296615 KRTAP12-1P59990 96 aa9.66□□□□□ -0.86
RNF180-201ENST00000296615 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
RNF180-201ENST00000296615 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
RNF180-201ENST00000296615 SPRR2GQ9BYE4 73 aa9.6□□□□□ -0.87
RNF180-201ENST00000296615 KRTAP19-1Q8IUB9 90 aa9.56□□□□□ -0.88
RNF180-201ENST00000296615 KRTAP9-3Q9BYQ3 159 aa9.43□□□□□ -0.9
RNF180-201ENST00000296615 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
RNF180-201ENST00000296615 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.92
RNF180-201ENST00000296615 ROMO1P60602 79 aa9.32□□□□□ -0.92
RNF180-201ENST00000296615 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
RNF180-201ENST00000296615 PLAC4Q8WY50 150 aa9.28□□□□□ -0.92
RNF180-201ENST00000296615 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
RNF180-201ENST00000296615 MT1BP07438 61 aa9.21□□□□□ -0.94
RNF180-201ENST00000296615 LCE2BO14633 110 aa9.15□□□□□ -0.94
RNF180-201ENST00000296615 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
RNF180-201ENST00000296615 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
RNF180-201ENST00000296615 MT1XP80297 61 aa8.92□□□□□ -0.98
RNF180-201ENST00000296615 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
RNF180-201ENST00000296615 KRTAP25-1Q3LHN0 102 aa8.91□□□□□ -0.98
RNF180-201ENST00000296615 USH2AO75445 5202 aa8.89□□□□□ -0.99
RNF180-201ENST00000296615 TNP1P09430 55 aa8.85□□□□□ -0.99
RNF180-201ENST00000296615 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
RNF180-201ENST00000296615 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
RNF180-201ENST00000296615 KRTAP23-1A1A580 65 aa8.61□□□□□ -1.03
RNF180-201ENST00000296615 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
RNF180-201ENST00000296615 SSPOA2VEC9 5147 aa8.57□□□□□ -1.04
RNF180-201ENST00000296615 KRTAP10-7P60409 375 aaPredicted RBP8.55□□□□□ -1.04
RNF180-201ENST00000296615 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
RNF180-201ENST00000296615 FSIP2Q5CZC0 6907 aa8.46□□□□□ -1.06
RNF180-201ENST00000296615 LCE3AQ5TA76 89 aa8.46□□□□□ -1.06
RNF180-201ENST00000296615 KRTAP9-2Q9BYQ4 174 aa8.4□□□□□ -1.06
RNF180-201ENST00000296615 KRTAP8-1Q8IUC2 63 aa8.3□□□□□ -1.08
RNF180-201ENST00000296615 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.09
RNF180-201ENST00000296615 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
RNF180-201ENST00000296615 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
RNF180-201ENST00000296615 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
RNF180-201ENST00000296615 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
RNF180-201ENST00000296615 KMT2DO14686 5537 aa8.11□□□□□ -1.11
RNF180-201ENST00000296615 KRTAP19-5Q3LI72 72 aa8.06□□□□□ -1.12
RNF180-201ENST00000296615 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
RNF180-201ENST00000296615 KRTAP19-7Q3SYF9 63 aa7.96□□□□□ -1.14
RNF180-201ENST00000296615 MT1EP04732 61 aa7.81□□□□□ -1.16
RNF180-201ENST00000296615 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
RNF180-201ENST00000296615 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
RNF180-201ENST00000296615 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
RNF180-201ENST00000296615 MT1LQ93083 61 aa7.66□□□□□ -1.18
RNF180-201ENST00000296615 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
RNF180-201ENST00000296615 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
RNF180-201ENST00000296615 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
RNF180-201ENST00000296615 SYNE2Q8WXH0 6885 aaKnown RBP7.54□□□□□ -1.2
RNF180-201ENST00000296615 KRTAP5-9P26371 169 aa7.52□□□□□ -1.2
RNF180-201ENST00000296615 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms