RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
RFC4-201ENST00000296273 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
RFC4-201ENST00000296273 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
RFC4-201ENST00000296273 H3BS24 57 aa5.64□□□□□ -1.51
RFC4-201ENST00000296273 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
RFC4-201ENST00000296273 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
RFC4-201ENST00000296273 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
RFC4-201ENST00000296273 Q5W150 140 aa5.6□□□□□ -1.51
RFC4-201ENST00000296273 V9GYY9 64 aa5.6□□□□□ -1.51
RFC4-201ENST00000296273 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
RFC4-201ENST00000296273 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
RFC4-201ENST00000296273 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
RFC4-201ENST00000296273 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
RFC4-201ENST00000296273 Q1T7F1 81 aa5.55□□□□□ -1.52
RFC4-201ENST00000296273 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
RFC4-201ENST00000296273 A8MUU9 505 aa5.54□□□□□ -1.52
RFC4-201ENST00000296273 ACYP2P14621 99 aa5.54□□□□□ -1.52
RFC4-201ENST00000296273 COA5Q86WW8 74 aa5.51□□□□□ -1.53
RFC4-201ENST00000296273 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
RFC4-201ENST00000296273 HRES1P13985 223 aa5.5□□□□□ -1.53
RFC4-201ENST00000296273 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
RFC4-201ENST00000296273 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
RFC4-201ENST00000296273 Q75L30 129 aa5.49□□□□□ -1.53
RFC4-201ENST00000296273 A8MUN3 132 aa5.48□□□□□ -1.53
RFC4-201ENST00000296273 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
RFC4-201ENST00000296273 C4orf26Q17RF5 130 aa5.47□□□□□ -1.53
RFC4-201ENST00000296273 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
RFC4-201ENST00000296273 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
RFC4-201ENST00000296273 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
RFC4-201ENST00000296273 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
RFC4-201ENST00000296273 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
RFC4-201ENST00000296273 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
RFC4-201ENST00000296273 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
RFC4-201ENST00000296273 SPTSSBQ8NFR3 76 aa5.38□□□□□ -1.55
RFC4-201ENST00000296273 SPINK7P58062 85 aa5.36□□□□□ -1.55
RFC4-201ENST00000296273 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
RFC4-201ENST00000296273 USH2AO75445 5202 aa5.34□□□□□ -1.55
RFC4-201ENST00000296273 SSPOA2VEC9 5147 aa5.34□□□□□ -1.56
RFC4-201ENST00000296273 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
RFC4-201ENST00000296273 PSPHP1O15172 72 aa5.32□□□□□ -1.56
RFC4-201ENST00000296273 MT2AP02795 61 aa5.31□□□□□ -1.56
RFC4-201ENST00000296273 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
RFC4-201ENST00000296273 Q5VV11 94 aa5.3□□□□□ -1.56
RFC4-201ENST00000296273 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
RFC4-201ENST00000296273 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
RFC4-201ENST00000296273 MT1FP04733 61 aa5.27□□□□□ -1.57
RFC4-201ENST00000296273 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
RFC4-201ENST00000296273 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
RFC4-201ENST00000296273 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
RFC4-201ENST00000296273 A0A1B0GU69 56 aa5.26□□□□□ -1.57
RFC4-201ENST00000296273 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
RFC4-201ENST00000296273 A6NED7 52 aa5.23□□□□□ -1.57
RFC4-201ENST00000296273 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.57
RFC4-201ENST00000296273 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
RFC4-201ENST00000296273 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
RFC4-201ENST00000296273 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
RFC4-201ENST00000296273 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
RFC4-201ENST00000296273 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
RFC4-201ENST00000296273 UQCR11O14957 56 aa5.16□□□□□ -1.58
RFC4-201ENST00000296273 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
RFC4-201ENST00000296273 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
RFC4-201ENST00000296273 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
RFC4-201ENST00000296273 LCA10Q71F78 164 aa5.11□□□□□ -1.59
RFC4-201ENST00000296273 S4R3F8 94 aa5.09□□□□□ -1.59
RFC4-201ENST00000296273 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
RFC4-201ENST00000296273 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
RFC4-201ENST00000296273 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
RFC4-201ENST00000296273 A0A1B0GU33 70 aa5.04□□□□□ -1.6
RFC4-201ENST00000296273 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
RFC4-201ENST00000296273 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
RFC4-201ENST00000296273 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
RFC4-201ENST00000296273 A8MU10 97 aa4.96□□□□□ -1.62
RFC4-201ENST00000296273 H0YAA0 97 aa4.96□□□□□ -1.62
RFC4-201ENST00000296273 A6NN06 94 aa4.95□□□□□ -1.62
RFC4-201ENST00000296273 K7ERS5 55 aa4.92□□□□□ -1.62
RFC4-201ENST00000296273 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
RFC4-201ENST00000296273 M0QZ58 72 aa4.87□□□□□ -1.63
RFC4-201ENST00000296273 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
RFC4-201ENST00000296273 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
RFC4-201ENST00000296273 NEBP20929 6669 aa4.85□□□□□ -1.63
RFC4-201ENST00000296273 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
RFC4-201ENST00000296273 P0C880 135 aa4.8□□□□□ -1.64
RFC4-201ENST00000296273 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
RFC4-201ENST00000296273 MT1BP07438 61 aa4.78□□□□□ -1.64
RFC4-201ENST00000296273 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
RFC4-201ENST00000296273 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
RFC4-201ENST00000296273 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
RFC4-201ENST00000296273 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
RFC4-201ENST00000296273 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
RFC4-201ENST00000296273 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
RFC4-201ENST00000296273 R4GN34 69 aa4.72□□□□□ -1.65
RFC4-201ENST00000296273 A0A0D9SG42 100 aa4.68□□□□□ -1.66
RFC4-201ENST00000296273 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
RFC4-201ENST00000296273 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
RFC4-201ENST00000296273 ROMO1P60602 79 aa4.66□□□□□ -1.66
RFC4-201ENST00000296273 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
RFC4-201ENST00000296273 KMT2DO14686 5537 aa4.63□□□□□ -1.67
RFC4-201ENST00000296273 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
RFC4-201ENST00000296273 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
RFC4-201ENST00000296273 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms