RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
PTX3-201ENST00000295927 PSPHP1O15172 72 aa11.4□□□□□ -0.58
PTX3-201ENST00000295927 LCA10Q71F78 164 aa11.39□□□□□ -0.59
PTX3-201ENST00000295927 S4R3F8 94 aa11.39□□□□□ -0.59
PTX3-201ENST00000295927 PRR15LQ9BU68 103 aa11.37□□□□□ -0.59
PTX3-201ENST00000295927 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
PTX3-201ENST00000295927 Q5VV11 94 aa11.29□□□□□ -0.6
PTX3-201ENST00000295927 KRTAP19-2Q3LHN2 52 aa11.27□□□□□ -0.6
PTX3-201ENST00000295927 MUC2Q02817 5179 aa11.27□□□□□ -0.61
PTX3-201ENST00000295927 A0A1B0GU69 56 aa11.25□□□□□ -0.61
PTX3-201ENST00000295927 SEC61GP60059 68 aa11.15□□□□□ -0.62
PTX3-201ENST00000295927 UBR4Q5T4S7 5183 aa11.14□□□□□ -0.63
PTX3-201ENST00000295927 CSAG1Q6PB30 78 aa11.11□□□□□ -0.63
PTX3-201ENST00000295927 RNF213Q63HN8 5207 aa11.09□□□□□ -0.63
PTX3-201ENST00000295927 A6NED7 52 aa11.03□□□□□ -0.64
PTX3-201ENST00000295927 FLGP20930 4061 aaPredicted RBP10.99□□□□□ -0.65
PTX3-201ENST00000295927 LCE2CQ5TA81 110 aa10.98□□□□□ -0.65
PTX3-201ENST00000295927 BRK1Q8WUW1 75 aa10.97□□□□□ -0.65
PTX3-201ENST00000295927 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
PTX3-201ENST00000295927 KRTAP10-6P60371 365 aaPredicted RBP10.95□□□□□ -0.66
PTX3-201ENST00000295927 UQCR11O14957 56 aa10.92□□□□□ -0.66
PTX3-201ENST00000295927 ADM2Q7Z4H4 148 aa10.91□□□□□ -0.66
PTX3-201ENST00000295927 A0A1B0GU33 70 aa10.9□□□□□ -0.67
PTX3-201ENST00000295927 P0C880 135 aa10.87□□□□□ -0.67
PTX3-201ENST00000295927 H0YAA0 97 aa10.86□□□□□ -0.67
PTX3-201ENST00000295927 A8MU10 97 aa10.86□□□□□ -0.67
PTX3-201ENST00000295927 CDC42SE1Q9NRR8 79 aa10.84□□□□□ -0.67
PTX3-201ENST00000295927 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
PTX3-201ENST00000295927 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
PTX3-201ENST00000295927 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
PTX3-201ENST00000295927 SPATA8Q6RVD6 105 aa10.79□□□□□ -0.68
PTX3-201ENST00000295927 MT1HP80294 61 aa10.74□□□□□ -0.69
PTX3-201ENST00000295927 KRTAP13-4Q3LI77 160 aa10.68□□□□□ -0.7
PTX3-201ENST00000295927 M0R2T5 61 aa10.66□□□□□ -0.7
PTX3-201ENST00000295927 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
PTX3-201ENST00000295927 M0QZ58 72 aa10.55□□□□□ -0.72
PTX3-201ENST00000295927 R4GN34 69 aa10.5□□□□□ -0.73
PTX3-201ENST00000295927 A0A0D9SG42 100 aa10.48□□□□□ -0.73
PTX3-201ENST00000295927 KRTAP9-8Q9BYQ0 159 aa10.37□□□□□ -0.75
PTX3-201ENST00000295927 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
PTX3-201ENST00000295927 CRIPTQ9P021 101 aa10.36□□□□□ -0.75
PTX3-201ENST00000295927 MT2AP02795 61 aa10.34□□□□□ -0.75
PTX3-201ENST00000295927 LINC01554Q52M75 96 aa10.34□□□□□ -0.75
PTX3-201ENST00000295927 A6NN06 94 aa10.3□□□□□ -0.76
PTX3-201ENST00000295927 MT1FP04733 61 aa10.29□□□□□ -0.76
PTX3-201ENST00000295927 K7ERS5 55 aa10.27□□□□□ -0.76
PTX3-201ENST00000295927 KRTAP10-10P60014 251 aa10.27□□□□□ -0.77
PTX3-201ENST00000295927 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
PTX3-201ENST00000295927 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
PTX3-201ENST00000295927 KRTAP12-2P59991 146 aa10.25□□□□□ -0.77
PTX3-201ENST00000295927 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
PTX3-201ENST00000295927 SPRR2GQ9BYE4 73 aa10.15□□□□□ -0.78
PTX3-201ENST00000295927 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
PTX3-201ENST00000295927 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
PTX3-201ENST00000295927 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.81
PTX3-201ENST00000295927 ROMO1P60602 79 aa9.89□□□□□ -0.83
PTX3-201ENST00000295927 KRTAP19-8Q3LI54 63 aa9.88□□□□□ -0.83
PTX3-201ENST00000295927 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
PTX3-201ENST00000295927 PLAC4Q8WY50 150 aa9.83□□□□□ -0.84
PTX3-201ENST00000295927 MT1BP07438 61 aa9.76□□□□□ -0.85
PTX3-201ENST00000295927 PRAC1Q96KF2 57 aa9.74□□□□□ -0.85
PTX3-201ENST00000295927 C10orf95Q9H7T3 257 aa9.71□□□□□ -0.86
PTX3-201ENST00000295927 LCE2BO14633 110 aa9.7□□□□□ -0.86
PTX3-201ENST00000295927 KRTAP25-1Q3LHN0 102 aa9.46□□□□□ -0.89
PTX3-201ENST00000295927 MT1XP80297 61 aa9.46□□□□□ -0.9
PTX3-201ENST00000295927 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
PTX3-201ENST00000295927 USH2AO75445 5202 aa9.43□□□□□ -0.9
PTX3-201ENST00000295927 TNP1P09430 55 aa9.37□□□□□ -0.91
PTX3-201ENST00000295927 PRO2289Q9P1D8 64 aa9.31□□□□□ -0.92
PTX3-201ENST00000295927 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
PTX3-201ENST00000295927 SSPOA2VEC9 5147 aa9.11□□□□□ -0.95
PTX3-201ENST00000295927 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
PTX3-201ENST00000295927 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
PTX3-201ENST00000295927 KRTAP23-1A1A580 65 aa9.07□□□□□ -0.96
PTX3-201ENST00000295927 KRTAP19-6Q3LI70 58 aa9.07□□□□□ -0.96
PTX3-201ENST00000295927 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
PTX3-201ENST00000295927 LCE3AQ5TA76 89 aa8.99□□□□□ -0.97
PTX3-201ENST00000295927 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
PTX3-201ENST00000295927 KRTAP9-2Q9BYQ4 174 aa8.89□□□□□ -0.99
PTX3-201ENST00000295927 KRTAP8-1Q8IUC2 63 aa8.78□□□□□ -1
PTX3-201ENST00000295927 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
PTX3-201ENST00000295927 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
PTX3-201ENST00000295927 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
PTX3-201ENST00000295927 KMT2DO14686 5537 aa8.71□□□□□ -1.01
PTX3-201ENST00000295927 KRTAP12-3P60328 96 aa8.62□□□□□ -1.03
PTX3-201ENST00000295927 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
PTX3-201ENST00000295927 KRTAP19-5Q3LI72 72 aa8.57□□□□□ -1.04
PTX3-201ENST00000295927 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.06
PTX3-201ENST00000295927 KRTAP19-7Q3SYF9 63 aa8.44□□□□□ -1.06
PTX3-201ENST00000295927 MT1EP04732 61 aa8.27□□□□□ -1.09
PTX3-201ENST00000295927 H3BS24 57 aa8.27□□□□□ -1.09
PTX3-201ENST00000295927 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
PTX3-201ENST00000295927 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.11
PTX3-201ENST00000295927 SPRR5A0A1B0GTR4 108 aa8.12□□□□□ -1.11
PTX3-201ENST00000295927 MT1LQ93083 61 aa8.12□□□□□ -1.11
PTX3-201ENST00000295927 SPRR2FQ96RM1 72 aa8.08□□□□□ -1.12
PTX3-201ENST00000295927 LCE3CQ5T5A8 94 aa8.05□□□□□ -1.12
PTX3-201ENST00000295927 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
PTX3-201ENST00000295927 MUC12Q9UKN1 5478 aa8.02□□□□□ -1.13
PTX3-201ENST00000295927 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms