RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
VCAM1-201ENST00000294728 KRTAP3-2Q9BYR7 98 aa3.38□□□□□ -1.87
VCAM1-201ENST00000294728 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
VCAM1-201ENST00000294728 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
VCAM1-201ENST00000294728 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
VCAM1-201ENST00000294728 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
VCAM1-201ENST00000294728 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
VCAM1-201ENST00000294728 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
VCAM1-201ENST00000294728 KRTAP3-1Q9BYR8 98 aa3.31□□□□□ -1.88
VCAM1-201ENST00000294728 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-201ENST00000294728 H0YAA0 97 aa3.3□□□□□ -1.88
VCAM1-201ENST00000294728 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
VCAM1-201ENST00000294728 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
VCAM1-201ENST00000294728 A0A1B0GU33 70 aa3.29□□□□□ -1.88
VCAM1-201ENST00000294728 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
VCAM1-201ENST00000294728 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
VCAM1-201ENST00000294728 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
VCAM1-201ENST00000294728 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
VCAM1-201ENST00000294728 TNXBP22105 4242 aa3.26□□□□□ -1.89
VCAM1-201ENST00000294728 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
VCAM1-201ENST00000294728 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
VCAM1-201ENST00000294728 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
VCAM1-201ENST00000294728 K7ERS5 55 aa3.23□□□□□ -1.89
VCAM1-201ENST00000294728 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
VCAM1-201ENST00000294728 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
VCAM1-201ENST00000294728 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
VCAM1-201ENST00000294728 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
VCAM1-201ENST00000294728 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
VCAM1-201ENST00000294728 C9orf92A6NGG3 77 aa3.19□□□□□ -1.9
VCAM1-201ENST00000294728 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
VCAM1-201ENST00000294728 LRP2P98164 4655 aa3.18□□□□□ -1.9
VCAM1-201ENST00000294728 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
VCAM1-201ENST00000294728 ROMO1P60602 79 aa3.17□□□□□ -1.9
VCAM1-201ENST00000294728 S4R3F8 94 aa3.13□□□□□ -1.91
VCAM1-201ENST00000294728 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
VCAM1-201ENST00000294728 XP32Q5T750 250 aa3.12□□□□□ -1.91
VCAM1-201ENST00000294728 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
VCAM1-201ENST00000294728 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
VCAM1-201ENST00000294728 M0QZ58 72 aa3.08□□□□□ -1.92
VCAM1-201ENST00000294728 LPAP08519 4548 aa3.07□□□□□ -1.92
VCAM1-201ENST00000294728 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
VCAM1-201ENST00000294728 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
VCAM1-201ENST00000294728 P0C880 135 aa3.03□□□□□ -1.92
VCAM1-201ENST00000294728 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
VCAM1-201ENST00000294728 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
VCAM1-201ENST00000294728 CRIPTQ9P021 101 aa3.01□□□□□ -1.93
VCAM1-201ENST00000294728 LCE2BO14633 110 aa3□□□□□ -1.93
VCAM1-201ENST00000294728 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
VCAM1-201ENST00000294728 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
VCAM1-201ENST00000294728 A0A0D9SG42 100 aa2.97□□□□□ -1.93
VCAM1-201ENST00000294728 MUC2Q02817 5179 aa2.96□□□□□ -1.93
VCAM1-201ENST00000294728 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
VCAM1-201ENST00000294728 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
VCAM1-201ENST00000294728 SEC61BP60468 96 aaKnown RBP2.9□□□□□ -1.94
VCAM1-201ENST00000294728 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.94
VCAM1-201ENST00000294728 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
VCAM1-201ENST00000294728 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
VCAM1-201ENST00000294728 R4GN34 69 aa2.87□□□□□ -1.95
VCAM1-201ENST00000294728 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
VCAM1-201ENST00000294728 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
VCAM1-201ENST00000294728 KRTAP4-1Q9BYQ7 146 aa2.84□□□□□ -1.95
VCAM1-201ENST00000294728 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
VCAM1-201ENST00000294728 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
VCAM1-201ENST00000294728 LORP23490 312 aaPredicted RBP2.81□□□□□ -1.96
VCAM1-201ENST00000294728 MT1HP80294 61 aa2.8□□□□□ -1.96
VCAM1-201ENST00000294728 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
VCAM1-201ENST00000294728 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
VCAM1-201ENST00000294728 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
VCAM1-201ENST00000294728 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
VCAM1-201ENST00000294728 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
VCAM1-201ENST00000294728 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
VCAM1-201ENST00000294728 TNP1P09430 55 aa2.7□□□□□ -1.98
VCAM1-201ENST00000294728 KRTAP4-8Q9BYQ9 185 aa2.69□□□□□ -1.98
VCAM1-201ENST00000294728 SPRR2GQ9BYE4 73 aa2.67□□□□□ -1.98
VCAM1-201ENST00000294728 M0R2T5 61 aa2.65□□□□□ -1.99
VCAM1-201ENST00000294728 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
VCAM1-201ENST00000294728 KRTAP9-8Q9BYQ0 159 aa2.63□□□□□ -1.99
VCAM1-201ENST00000294728 USH2AO75445 5202 aa2.63□□□□□ -1.99
VCAM1-201ENST00000294728 KRTAP19-1Q8IUB9 90 aa2.62□□□□□ -1.99
VCAM1-201ENST00000294728 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
VCAM1-201ENST00000294728 KRTAP4-8A0A0G2JLE6 195 aa2.6□□□□□ -1.99
VCAM1-201ENST00000294728 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
VCAM1-201ENST00000294728 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
VCAM1-201ENST00000294728 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
VCAM1-201ENST00000294728 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
VCAM1-201ENST00000294728 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
VCAM1-201ENST00000294728 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
VCAM1-201ENST00000294728 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
VCAM1-201ENST00000294728 MT2AP02795 61 aa2.55□□□□□ -2
VCAM1-201ENST00000294728 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
VCAM1-201ENST00000294728 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
VCAM1-201ENST00000294728 MT1FP04733 61 aa2.53□□□□□ -2
VCAM1-201ENST00000294728 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
VCAM1-201ENST00000294728 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
VCAM1-201ENST00000294728 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
VCAM1-201ENST00000294728 NEBP20929 6669 aa2.47□□□□□ -2.01
VCAM1-201ENST00000294728 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
VCAM1-201ENST00000294728 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
VCAM1-201ENST00000294728 INE1O15225 51 aa2.45□□□□□ -2.02
VCAM1-201ENST00000294728 KRTAP10-5P60370 271 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms