RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
SDE2-201ENST00000272091 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SDE2-201ENST00000272091 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
SDE2-201ENST00000272091 A6NN06 94 aa6.12□□□□□ -1.43
SDE2-201ENST00000272091 V9GYY9 64 aa6.09□□□□□ -1.43
SDE2-201ENST00000272091 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
SDE2-201ENST00000272091 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
SDE2-201ENST00000272091 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
SDE2-201ENST00000272091 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
SDE2-201ENST00000272091 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
SDE2-201ENST00000272091 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
SDE2-201ENST00000272091 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
SDE2-201ENST00000272091 MUC2Q02817 5179 aa6□□□□□ -1.45
SDE2-201ENST00000272091 S4R3F8 94 aa6□□□□□ -1.45
SDE2-201ENST00000272091 SPTSSBQ8NFR3 76 aa5.98□□□□□ -1.45
SDE2-201ENST00000272091 SEC61GP60059 68 aa5.97□□□□□ -1.45
SDE2-201ENST00000272091 A0A1B0GU69 56 aa5.96□□□□□ -1.46
SDE2-201ENST00000272091 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
SDE2-201ENST00000272091 A6NED7 52 aa5.92□□□□□ -1.46
SDE2-201ENST00000272091 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
SDE2-201ENST00000272091 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
SDE2-201ENST00000272091 FLGP20930 4061 aaPredicted RBP5.88□□□□□ -1.47
SDE2-201ENST00000272091 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
SDE2-201ENST00000272091 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
SDE2-201ENST00000272091 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
SDE2-201ENST00000272091 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
SDE2-201ENST00000272091 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
SDE2-201ENST00000272091 CSAG1Q6PB30 78 aa5.82□□□□□ -1.48
SDE2-201ENST00000272091 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
SDE2-201ENST00000272091 P0C880 135 aa5.79□□□□□ -1.48
SDE2-201ENST00000272091 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
SDE2-201ENST00000272091 UQCR11O14957 56 aa5.78□□□□□ -1.48
SDE2-201ENST00000272091 A0A1B0GU33 70 aa5.77□□□□□ -1.49
SDE2-201ENST00000272091 H0YAA0 97 aa5.77□□□□□ -1.49
SDE2-201ENST00000272091 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
SDE2-201ENST00000272091 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
SDE2-201ENST00000272091 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
SDE2-201ENST00000272091 MT1HP80294 61 aa5.67□□□□□ -1.5
SDE2-201ENST00000272091 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
SDE2-201ENST00000272091 A0A0D9SG42 100 aa5.56□□□□□ -1.52
SDE2-201ENST00000272091 M0QZ58 72 aa5.55□□□□□ -1.52
SDE2-201ENST00000272091 M0R2T5 61 aa5.51□□□□□ -1.53
SDE2-201ENST00000272091 R4GN34 69 aa5.5□□□□□ -1.53
SDE2-201ENST00000272091 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
SDE2-201ENST00000272091 KRTAP12-2P59991 146 aa5.49□□□□□ -1.53
SDE2-201ENST00000272091 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
SDE2-201ENST00000272091 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
SDE2-201ENST00000272091 MT2AP02795 61 aa5.47□□□□□ -1.53
SDE2-201ENST00000272091 MT1FP04733 61 aa5.46□□□□□ -1.54
SDE2-201ENST00000272091 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
SDE2-201ENST00000272091 LCE2AQ5TA79 106 aaPredicted RBP5.4□□□□□ -1.54
SDE2-201ENST00000272091 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
SDE2-201ENST00000272091 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
SDE2-201ENST00000272091 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
SDE2-201ENST00000272091 K7ERS5 55 aa5.37□□□□□ -1.55
SDE2-201ENST00000272091 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
SDE2-201ENST00000272091 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SDE2-201ENST00000272091 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
SDE2-201ENST00000272091 ROMO1P60602 79 aa5.26□□□□□ -1.57
SDE2-201ENST00000272091 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
SDE2-201ENST00000272091 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
SDE2-201ENST00000272091 MT1BP07438 61 aa5.19□□□□□ -1.58
SDE2-201ENST00000272091 LCE2BO14633 110 aa5.14□□□□□ -1.59
SDE2-201ENST00000272091 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
SDE2-201ENST00000272091 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
SDE2-201ENST00000272091 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.6
SDE2-201ENST00000272091 H3BS24 57 aa5.08□□□□□ -1.6
SDE2-201ENST00000272091 MT1XP80297 61 aa5.04□□□□□ -1.6
SDE2-201ENST00000272091 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
SDE2-201ENST00000272091 USH2AO75445 5202 aa5.01□□□□□ -1.61
SDE2-201ENST00000272091 TNP1P09430 55 aa4.91□□□□□ -1.62
SDE2-201ENST00000272091 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
SDE2-201ENST00000272091 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
SDE2-201ENST00000272091 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
SDE2-201ENST00000272091 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
SDE2-201ENST00000272091 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
SDE2-201ENST00000272091 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
SDE2-201ENST00000272091 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
SDE2-201ENST00000272091 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
SDE2-201ENST00000272091 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
SDE2-201ENST00000272091 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
SDE2-201ENST00000272091 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SDE2-201ENST00000272091 KMT2DO14686 5537 aa4.67□□□□□ -1.66
SDE2-201ENST00000272091 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
SDE2-201ENST00000272091 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
SDE2-201ENST00000272091 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
SDE2-201ENST00000272091 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
SDE2-201ENST00000272091 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
SDE2-201ENST00000272091 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
SDE2-201ENST00000272091 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SDE2-201ENST00000272091 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
SDE2-201ENST00000272091 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
SDE2-201ENST00000272091 MT1EP04732 61 aa4.39□□□□□ -1.71
SDE2-201ENST00000272091 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.72
SDE2-201ENST00000272091 MT1LQ93083 61 aa4.32□□□□□ -1.72
SDE2-201ENST00000272091 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
SDE2-201ENST00000272091 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
SDE2-201ENST00000272091 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
SDE2-201ENST00000272091 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.73
SDE2-201ENST00000272091 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms