RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 C7orf65Q6ZTY9 151 aa11□□□□□ -0.65
LYSMD2-201ENST00000267838 SEC61GP60059 68 aa10.97□□□□□ -0.65
LYSMD2-201ENST00000267838 RPL37P61927 97 aaKnown RBP10.97□□□□□ -0.65
LYSMD2-201ENST00000267838 TPRXLQ17RH7 258 aa10.94□□□□□ -0.66
LYSMD2-201ENST00000267838 SPATA8Q6RVD6 105 aa10.85□□□□□ -0.67
LYSMD2-201ENST00000267838 UQCR11O14957 56 aa10.84□□□□□ -0.67
LYSMD2-201ENST00000267838 MIR22HGQ0VDD5 57 aa10.78□□□□□ -0.68
LYSMD2-201ENST00000267838 HERC1Q15751 4861 aa10.73□□□□□ -0.69
LYSMD2-201ENST00000267838 RBM12B-AS1Q9P1G2 102 aa10.71□□□□□ -0.69
LYSMD2-201ENST00000267838 LPAP08519 4548 aa10.69□□□□□ -0.7
LYSMD2-201ENST00000267838 LRP2P98164 4655 aa10.64□□□□□ -0.71
LYSMD2-201ENST00000267838 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
LYSMD2-201ENST00000267838 COX6B2Q6YFQ2 88 aa10.62□□□□□ -0.71
LYSMD2-201ENST00000267838 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
LYSMD2-201ENST00000267838 HMCN2Q8NDA2 5059 aa10.52□□□□□ -0.73
LYSMD2-201ENST00000267838 PRAC1Q96KF2 57 aa10.42□□□□□ -0.74
LYSMD2-201ENST00000267838 A0A1B0GU33 70 aa10.39□□□□□ -0.75
LYSMD2-201ENST00000267838 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
LYSMD2-201ENST00000267838 H0YAA0 97 aa10.37□□□□□ -0.75
LYSMD2-201ENST00000267838 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
LYSMD2-201ENST00000267838 MUC17Q685J3 4493 aa10.35□□□□□ -0.75
LYSMD2-201ENST00000267838 KRTAP4-1Q9BYQ7 146 aa10.34□□□□□ -0.75
LYSMD2-201ENST00000267838 S4R3F8 94 aa10.28□□□□□ -0.76
LYSMD2-201ENST00000267838 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
LYSMD2-201ENST00000267838 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
LYSMD2-201ENST00000267838 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
LYSMD2-201ENST00000267838 K7ERS5 55 aa10.18□□□□□ -0.78
LYSMD2-201ENST00000267838 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
LYSMD2-201ENST00000267838 KRTAP19-2Q3LHN2 52 aa10.08□□□□□ -0.8
LYSMD2-201ENST00000267838 MUC2Q02817 5179 aa10.03□□□□□ -0.8
LYSMD2-201ENST00000267838 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
LYSMD2-201ENST00000267838 KRTAP25-1Q3LHN0 102 aa9.98□□□□□ -0.81
LYSMD2-201ENST00000267838 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
LYSMD2-201ENST00000267838 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
LYSMD2-201ENST00000267838 ROMO1P60602 79 aa9.87□□□□□ -0.83
LYSMD2-201ENST00000267838 KRTAP13-4Q3LI77 160 aa9.85□□□□□ -0.83
LYSMD2-201ENST00000267838 P0C880 135 aa9.81□□□□□ -0.84
LYSMD2-201ENST00000267838 A0A0D9SG42 100 aa9.79□□□□□ -0.84
LYSMD2-201ENST00000267838 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
LYSMD2-201ENST00000267838 FLGP20930 4061 aaPredicted RBP9.77□□□□□ -0.85
LYSMD2-201ENST00000267838 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
LYSMD2-201ENST00000267838 M0QZ58 72 aa9.63□□□□□ -0.87
LYSMD2-201ENST00000267838 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
LYSMD2-201ENST00000267838 MT1HP80294 61 aa9.59□□□□□ -0.87
LYSMD2-201ENST00000267838 KRTAP12-2P59991 146 aa9.57□□□□□ -0.88
LYSMD2-201ENST00000267838 KRTAP12-1P59990 96 aa9.54□□□□□ -0.88
LYSMD2-201ENST00000267838 M0R2T5 61 aa9.52□□□□□ -0.89
LYSMD2-201ENST00000267838 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
LYSMD2-201ENST00000267838 LORP23490 312 aaPredicted RBP9.49□□□□□ -0.89
LYSMD2-201ENST00000267838 R4GN34 69 aa9.48□□□□□ -0.89
LYSMD2-201ENST00000267838 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
LYSMD2-201ENST00000267838 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
LYSMD2-201ENST00000267838 KRTAP9-8Q9BYQ0 159 aa9.25□□□□□ -0.93
LYSMD2-201ENST00000267838 MT2AP02795 61 aa9.24□□□□□ -0.93
LYSMD2-201ENST00000267838 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
LYSMD2-201ENST00000267838 H3BS24 57 aa9.22□□□□□ -0.93
LYSMD2-201ENST00000267838 MT1FP04733 61 aa9.19□□□□□ -0.94
LYSMD2-201ENST00000267838 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
LYSMD2-201ENST00000267838 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
LYSMD2-201ENST00000267838 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
LYSMD2-201ENST00000267838 KRTAP15-1Q3LI76 137 aa9.07□□□□□ -0.96
LYSMD2-201ENST00000267838 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
LYSMD2-201ENST00000267838 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
LYSMD2-201ENST00000267838 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
LYSMD2-201ENST00000267838 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
LYSMD2-201ENST00000267838 PP632Q6XCG6 107 aa8.84□□□□□ -1
LYSMD2-201ENST00000267838 NDUFAF8A1L188 74 aa8.79□□□□□ -1
LYSMD2-201ENST00000267838 MT1BP07438 61 aa8.73□□□□□ -1.01
LYSMD2-201ENST00000267838 LCE2BO14633 110 aa8.64□□□□□ -1.03
LYSMD2-201ENST00000267838 KRTAP23-1A1A580 65 aa8.58□□□□□ -1.04
LYSMD2-201ENST00000267838 TNP1P09430 55 aa8.57□□□□□ -1.04
LYSMD2-201ENST00000267838 MT1XP80297 61 aa8.48□□□□□ -1.05
LYSMD2-201ENST00000267838 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
LYSMD2-201ENST00000267838 USH2AO75445 5202 aa8.44□□□□□ -1.06
LYSMD2-201ENST00000267838 LUZP6Q538Z0 58 aa8.37□□□□□ -1.07
LYSMD2-201ENST00000267838 PRO2289Q9P1D8 64 aa8.36□□□□□ -1.07
LYSMD2-201ENST00000267838 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
LYSMD2-201ENST00000267838 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.08
LYSMD2-201ENST00000267838 SSPOA2VEC9 5147 aa8.23□□□□□ -1.09
LYSMD2-201ENST00000267838 SPRR5A0A1B0GTR4 108 aa8.16□□□□□ -1.1
LYSMD2-201ENST00000267838 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
LYSMD2-201ENST00000267838 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
LYSMD2-201ENST00000267838 KRTAP10-12P60413 245 aa8.1□□□□□ -1.11
LYSMD2-201ENST00000267838 KRTAP19-6Q3LI70 58 aa8.07□□□□□ -1.12
LYSMD2-201ENST00000267838 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
LYSMD2-201ENST00000267838 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
LYSMD2-201ENST00000267838 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
LYSMD2-201ENST00000267838 FCGBPQ9Y6R7 5405 aaPredicted RBP7.88□□□□□ -1.15
LYSMD2-201ENST00000267838 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
LYSMD2-201ENST00000267838 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
LYSMD2-201ENST00000267838 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
LYSMD2-201ENST00000267838 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
LYSMD2-201ENST00000267838 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
LYSMD2-201ENST00000267838 KMT2DO14686 5537 aa7.69□□□□□ -1.18
LYSMD2-201ENST00000267838 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
LYSMD2-201ENST00000267838 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
LYSMD2-201ENST00000267838 MACF1Q9UPN3 7388 aaKnown RBP7.57□□□□□ -1.2
LYSMD2-201ENST00000267838 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
LYSMD2-201ENST00000267838 MT1EP04732 61 aa7.42□□□□□ -1.22
LYSMD2-201ENST00000267838 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms