RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 A0A0U1RQV1 116 aa5.03□□□□□ -1.6
SNRNP40-201ENST00000263694 MUC2Q02817 5179 aa5.02□□□□□ -1.61
SNRNP40-201ENST00000263694 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
SNRNP40-201ENST00000263694 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
SNRNP40-201ENST00000263694 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
SNRNP40-201ENST00000263694 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
SNRNP40-201ENST00000263694 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
SNRNP40-201ENST00000263694 H3BPC8 53 aa4.99□□□□□ -1.61
SNRNP40-201ENST00000263694 HRES1P13985 223 aa4.99□□□□□ -1.61
SNRNP40-201ENST00000263694 CYSTM1Q9H1C7 97 aa4.99□□□□□ -1.61
SNRNP40-201ENST00000263694 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
SNRNP40-201ENST00000263694 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
SNRNP40-201ENST00000263694 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
SNRNP40-201ENST00000263694 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
SNRNP40-201ENST00000263694 H7BZZ5 65 aa4.9□□□□□ -1.63
SNRNP40-201ENST00000263694 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
SNRNP40-201ENST00000263694 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
SNRNP40-201ENST00000263694 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
SNRNP40-201ENST00000263694 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
SNRNP40-201ENST00000263694 NDUFC1O43677 76 aa4.86□□□□□ -1.63
SNRNP40-201ENST00000263694 SPANXA2-OT1Q8N9U9 137 aa4.82□□□□□ -1.64
SNRNP40-201ENST00000263694 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
SNRNP40-201ENST00000263694 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
SNRNP40-201ENST00000263694 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-201ENST00000263694 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
SNRNP40-201ENST00000263694 A8MUN3 132 aa4.78□□□□□ -1.64
SNRNP40-201ENST00000263694 ACYP2P14621 99 aa4.77□□□□□ -1.65
SNRNP40-201ENST00000263694 TMEM258P61165 79 aa4.76□□□□□ -1.65
SNRNP40-201ENST00000263694 MT1HP80294 61 aa4.76□□□□□ -1.65
SNRNP40-201ENST00000263694 LCA10Q71F78 164 aa4.75□□□□□ -1.65
SNRNP40-201ENST00000263694 S4R3F8 94 aa4.75□□□□□ -1.65
SNRNP40-201ENST00000263694 COA5Q86WW8 74 aa4.72□□□□□ -1.65
SNRNP40-201ENST00000263694 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-201ENST00000263694 M0R2T5 61 aa4.7□□□□□ -1.66
SNRNP40-201ENST00000263694 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
SNRNP40-201ENST00000263694 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
SNRNP40-201ENST00000263694 CSAG1Q6PB30 78 aa4.65□□□□□ -1.66
SNRNP40-201ENST00000263694 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
SNRNP40-201ENST00000263694 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-201ENST00000263694 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
SNRNP40-201ENST00000263694 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
SNRNP40-201ENST00000263694 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
SNRNP40-201ENST00000263694 MT2AP02795 61 aa4.54□□□□□ -1.68
SNRNP40-201ENST00000263694 MT1FP04733 61 aa4.53□□□□□ -1.69
SNRNP40-201ENST00000263694 P0C880 135 aa4.52□□□□□ -1.69
SNRNP40-201ENST00000263694 H0YAA0 97 aa4.5□□□□□ -1.69
SNRNP40-201ENST00000263694 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SNRNP40-201ENST00000263694 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
SNRNP40-201ENST00000263694 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
SNRNP40-201ENST00000263694 A0A1B0GU69 56 aa4.45□□□□□ -1.7
SNRNP40-201ENST00000263694 SEC61GP60059 68 aa4.44□□□□□ -1.7
SNRNP40-201ENST00000263694 Q1T7F1 81 aa4.44□□□□□ -1.7
SNRNP40-201ENST00000263694 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
SNRNP40-201ENST00000263694 PSPHP1O15172 72 aa4.42□□□□□ -1.7
SNRNP40-201ENST00000263694 V9GYY9 64 aa4.39□□□□□ -1.71
SNRNP40-201ENST00000263694 A0A1B0GU33 70 aa4.38□□□□□ -1.71
SNRNP40-201ENST00000263694 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
SNRNP40-201ENST00000263694 M0QZ58 72 aa4.37□□□□□ -1.71
SNRNP40-201ENST00000263694 R4GN34 69 aa4.37□□□□□ -1.71
SNRNP40-201ENST00000263694 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
SNRNP40-201ENST00000263694 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
SNRNP40-201ENST00000263694 Q5VV11 94 aa4.36□□□□□ -1.71
SNRNP40-201ENST00000263694 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
SNRNP40-201ENST00000263694 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
SNRNP40-201ENST00000263694 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
SNRNP40-201ENST00000263694 A0A0D9SG42 100 aa4.29□□□□□ -1.72
SNRNP40-201ENST00000263694 A8MU10 97 aa4.28□□□□□ -1.72
SNRNP40-201ENST00000263694 UQCR11O14957 56 aa4.27□□□□□ -1.73
SNRNP40-201ENST00000263694 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
SNRNP40-201ENST00000263694 USH2AO75445 5202 aa4.25□□□□□ -1.73
SNRNP40-201ENST00000263694 A6NED7 52 aa4.25□□□□□ -1.73
SNRNP40-201ENST00000263694 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
SNRNP40-201ENST00000263694 MT1BP07438 61 aa4.24□□□□□ -1.73
SNRNP40-201ENST00000263694 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
SNRNP40-201ENST00000263694 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-201ENST00000263694 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
SNRNP40-201ENST00000263694 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
SNRNP40-201ENST00000263694 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
SNRNP40-201ENST00000263694 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
SNRNP40-201ENST00000263694 A6NN06 94 aa4.15□□□□□ -1.74
SNRNP40-201ENST00000263694 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.74
SNRNP40-201ENST00000263694 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
SNRNP40-201ENST00000263694 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
SNRNP40-201ENST00000263694 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SNRNP40-201ENST00000263694 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
SNRNP40-201ENST00000263694 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
SNRNP40-201ENST00000263694 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
SNRNP40-201ENST00000263694 MT1XP80297 61 aa4.06□□□□□ -1.76
SNRNP40-201ENST00000263694 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SNRNP40-201ENST00000263694 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
SNRNP40-201ENST00000263694 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
SNRNP40-201ENST00000263694 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SNRNP40-201ENST00000263694 K7ERS5 55 aa4.02□□□□□ -1.77
SNRNP40-201ENST00000263694 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-201ENST00000263694 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
SNRNP40-201ENST00000263694 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
SNRNP40-201ENST00000263694 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
SNRNP40-201ENST00000263694 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
SNRNP40-201ENST00000263694 ROMO1P60602 79 aa3.87□□□□□ -1.79
SNRNP40-201ENST00000263694 TNP1P09430 55 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms