RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
VPS26A-201ENST00000263559 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
VPS26A-201ENST00000263559 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
VPS26A-201ENST00000263559 HMCN2Q8NDA2 5059 aa7.93□□□□□ -1.14
VPS26A-201ENST00000263559 LCA10Q71F78 164 aa7.93□□□□□ -1.14
VPS26A-201ENST00000263559 H1FX-AS1Q4G0G2 97 aa7.92□□□□□ -1.14
VPS26A-201ENST00000263559 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
VPS26A-201ENST00000263559 S4R3F8 94 aa7.91□□□□□ -1.14
VPS26A-201ENST00000263559 A6NED7 52 aa7.89□□□□□ -1.15
VPS26A-201ENST00000263559 SEC61GP60059 68 aa7.85□□□□□ -1.15
VPS26A-201ENST00000263559 A8MU10 97 aa7.83□□□□□ -1.16
VPS26A-201ENST00000263559 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
VPS26A-201ENST00000263559 MUC2Q02817 5179 aa7.76□□□□□ -1.17
VPS26A-201ENST00000263559 CDC42SE1Q9NRR8 79 aa7.76□□□□□ -1.17
VPS26A-201ENST00000263559 UQCR11O14957 56 aa7.75□□□□□ -1.17
VPS26A-201ENST00000263559 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
VPS26A-201ENST00000263559 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
VPS26A-201ENST00000263559 A0A1B0GU33 70 aa7.68□□□□□ -1.18
VPS26A-201ENST00000263559 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
VPS26A-201ENST00000263559 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
VPS26A-201ENST00000263559 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
VPS26A-201ENST00000263559 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
VPS26A-201ENST00000263559 H0YAA0 97 aa7.6□□□□□ -1.19
VPS26A-201ENST00000263559 P0C880 135 aa7.6□□□□□ -1.19
VPS26A-201ENST00000263559 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
VPS26A-201ENST00000263559 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
VPS26A-201ENST00000263559 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
VPS26A-201ENST00000263559 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-201ENST00000263559 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
VPS26A-201ENST00000263559 PMAIP1Q13794 54 aa7.51□□□□□ -1.21
VPS26A-201ENST00000263559 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
VPS26A-201ENST00000263559 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
VPS26A-201ENST00000263559 A6NN06 94 aa7.44□□□□□ -1.22
VPS26A-201ENST00000263559 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
VPS26A-201ENST00000263559 A0A0D9SG42 100 aa7.38□□□□□ -1.23
VPS26A-201ENST00000263559 M0QZ58 72 aa7.36□□□□□ -1.23
VPS26A-201ENST00000263559 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
VPS26A-201ENST00000263559 MT1HP80294 61 aa7.31□□□□□ -1.24
VPS26A-201ENST00000263559 R4GN34 69 aa7.3□□□□□ -1.24
VPS26A-201ENST00000263559 K7ERS5 55 aa7.26□□□□□ -1.25
VPS26A-201ENST00000263559 M0R2T5 61 aa7.26□□□□□ -1.25
VPS26A-201ENST00000263559 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
VPS26A-201ENST00000263559 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
VPS26A-201ENST00000263559 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
VPS26A-201ENST00000263559 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
VPS26A-201ENST00000263559 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
VPS26A-201ENST00000263559 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
VPS26A-201ENST00000263559 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
VPS26A-201ENST00000263559 MT2AP02795 61 aa7.06□□□□□ -1.28
VPS26A-201ENST00000263559 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
VPS26A-201ENST00000263559 MT1FP04733 61 aa7.04□□□□□ -1.28
VPS26A-201ENST00000263559 ROMO1P60602 79 aa7.02□□□□□ -1.29
VPS26A-201ENST00000263559 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
VPS26A-201ENST00000263559 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
VPS26A-201ENST00000263559 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
VPS26A-201ENST00000263559 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
VPS26A-201ENST00000263559 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
VPS26A-201ENST00000263559 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
VPS26A-201ENST00000263559 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
VPS26A-201ENST00000263559 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
VPS26A-201ENST00000263559 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
VPS26A-201ENST00000263559 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
VPS26A-201ENST00000263559 MT1BP07438 61 aa6.69□□□□□ -1.34
VPS26A-201ENST00000263559 LCE2BO14633 110 aa6.61□□□□□ -1.35
VPS26A-201ENST00000263559 TNP1P09430 55 aa6.54□□□□□ -1.36
VPS26A-201ENST00000263559 MT1XP80297 61 aa6.52□□□□□ -1.37
VPS26A-201ENST00000263559 KRTAP10-5P60370 271 aa6.51□□□□□ -1.37
VPS26A-201ENST00000263559 USH2AO75445 5202 aa6.46□□□□□ -1.38
VPS26A-201ENST00000263559 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
VPS26A-201ENST00000263559 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
VPS26A-201ENST00000263559 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
VPS26A-201ENST00000263559 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
VPS26A-201ENST00000263559 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
VPS26A-201ENST00000263559 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
VPS26A-201ENST00000263559 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
VPS26A-201ENST00000263559 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
VPS26A-201ENST00000263559 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
VPS26A-201ENST00000263559 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
VPS26A-201ENST00000263559 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
VPS26A-201ENST00000263559 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
VPS26A-201ENST00000263559 KMT2DO14686 5537 aa6.06□□□□□ -1.44
VPS26A-201ENST00000263559 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
VPS26A-201ENST00000263559 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
VPS26A-201ENST00000263559 KRTAP12-3P60328 96 aa6□□□□□ -1.45
VPS26A-201ENST00000263559 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
VPS26A-201ENST00000263559 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
VPS26A-201ENST00000263559 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
VPS26A-201ENST00000263559 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
VPS26A-201ENST00000263559 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
VPS26A-201ENST00000263559 MT1EP04732 61 aa5.69□□□□□ -1.5
VPS26A-201ENST00000263559 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
VPS26A-201ENST00000263559 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
VPS26A-201ENST00000263559 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
VPS26A-201ENST00000263559 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
VPS26A-201ENST00000263559 MT1LQ93083 61 aa5.6□□□□□ -1.51
VPS26A-201ENST00000263559 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
VPS26A-201ENST00000263559 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
VPS26A-201ENST00000263559 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
VPS26A-201ENST00000263559 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
VPS26A-201ENST00000263559 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms