RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HRES1P13985 223 aa8.1□□□□□ -1.11
CCDC90B-201ENST00000260054 A8MUN3 132 aa8.09□□□□□ -1.11
CCDC90B-201ENST00000260054 Q5VV11 94 aa8.08□□□□□ -1.12
CCDC90B-201ENST00000260054 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
CCDC90B-201ENST00000260054 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
CCDC90B-201ENST00000260054 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
CCDC90B-201ENST00000260054 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
CCDC90B-201ENST00000260054 COA5Q86WW8 74 aa8.02□□□□□ -1.13
CCDC90B-201ENST00000260054 PRR15LQ9BU68 103 aa8□□□□□ -1.13
CCDC90B-201ENST00000260054 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
CCDC90B-201ENST00000260054 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
CCDC90B-201ENST00000260054 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
CCDC90B-201ENST00000260054 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.13
CCDC90B-201ENST00000260054 SEC61GP60059 68 aa7.95□□□□□ -1.14
CCDC90B-201ENST00000260054 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
CCDC90B-201ENST00000260054 LCE2BO14633 110 aa7.94□□□□□ -1.14
CCDC90B-201ENST00000260054 A6NED7 52 aa7.89□□□□□ -1.15
CCDC90B-201ENST00000260054 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
CCDC90B-201ENST00000260054 A8MU10 97 aa7.87□□□□□ -1.15
CCDC90B-201ENST00000260054 LCA10Q71F78 164 aa7.86□□□□□ -1.15
CCDC90B-201ENST00000260054 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
CCDC90B-201ENST00000260054 MT1HP80294 61 aa7.84□□□□□ -1.15
CCDC90B-201ENST00000260054 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
CCDC90B-201ENST00000260054 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
CCDC90B-201ENST00000260054 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
CCDC90B-201ENST00000260054 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
CCDC90B-201ENST00000260054 SPTSSBQ8NFR3 76 aa7.8□□□□□ -1.16
CCDC90B-201ENST00000260054 A6NN06 94 aa7.79□□□□□ -1.16
CCDC90B-201ENST00000260054 ACYP2P14621 99 aa7.75□□□□□ -1.17
CCDC90B-201ENST00000260054 M0R2T5 61 aa7.71□□□□□ -1.18
CCDC90B-201ENST00000260054 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
CCDC90B-201ENST00000260054 S4R3F8 94 aa7.67□□□□□ -1.18
CCDC90B-201ENST00000260054 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
CCDC90B-201ENST00000260054 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
CCDC90B-201ENST00000260054 A0A1B0GU69 56 aa7.57□□□□□ -1.2
CCDC90B-201ENST00000260054 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
CCDC90B-201ENST00000260054 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
CCDC90B-201ENST00000260054 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
CCDC90B-201ENST00000260054 UQCR11O14957 56 aa7.47□□□□□ -1.21
CCDC90B-201ENST00000260054 MT2AP02795 61 aa7.45□□□□□ -1.22
CCDC90B-201ENST00000260054 MIR22HGQ0VDD5 57 aa7.45□□□□□ -1.22
CCDC90B-201ENST00000260054 MT1FP04733 61 aa7.4□□□□□ -1.23
CCDC90B-201ENST00000260054 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
CCDC90B-201ENST00000260054 H0YAA0 97 aa7.34□□□□□ -1.23
CCDC90B-201ENST00000260054 PRAC1Q96KF2 57 aa7.34□□□□□ -1.23
CCDC90B-201ENST00000260054 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
CCDC90B-201ENST00000260054 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
CCDC90B-201ENST00000260054 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
CCDC90B-201ENST00000260054 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
CCDC90B-201ENST00000260054 P0C880 135 aa7.22□□□□□ -1.25
CCDC90B-201ENST00000260054 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
CCDC90B-201ENST00000260054 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
CCDC90B-201ENST00000260054 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
CCDC90B-201ENST00000260054 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
CCDC90B-201ENST00000260054 A0A1B0GU33 70 aa7.1□□□□□ -1.27
CCDC90B-201ENST00000260054 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
CCDC90B-201ENST00000260054 KRTAP9-6A0A140TA67 174 aa7.09□□□□□ -1.27
CCDC90B-201ENST00000260054 R4GN34 69 aa7.06□□□□□ -1.28
CCDC90B-201ENST00000260054 USH2AO75445 5202 aa7.04□□□□□ -1.28
CCDC90B-201ENST00000260054 M0QZ58 72 aa7.03□□□□□ -1.28
CCDC90B-201ENST00000260054 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
CCDC90B-201ENST00000260054 K7ERS5 55 aa6.99□□□□□ -1.29
CCDC90B-201ENST00000260054 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
CCDC90B-201ENST00000260054 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
CCDC90B-201ENST00000260054 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
CCDC90B-201ENST00000260054 MT1BP07438 61 aa6.93□□□□□ -1.3
CCDC90B-201ENST00000260054 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
CCDC90B-201ENST00000260054 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
CCDC90B-201ENST00000260054 ROMO1P60602 79 aa6.83□□□□□ -1.32
CCDC90B-201ENST00000260054 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
CCDC90B-201ENST00000260054 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
CCDC90B-201ENST00000260054 A0A0D9SG42 100 aa6.77□□□□□ -1.32
CCDC90B-201ENST00000260054 H3BS24 57 aa6.76□□□□□ -1.33
CCDC90B-201ENST00000260054 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
CCDC90B-201ENST00000260054 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
CCDC90B-201ENST00000260054 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
CCDC90B-201ENST00000260054 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
CCDC90B-201ENST00000260054 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
CCDC90B-201ENST00000260054 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
CCDC90B-201ENST00000260054 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.35
CCDC90B-201ENST00000260054 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
CCDC90B-201ENST00000260054 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
CCDC90B-201ENST00000260054 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
CCDC90B-201ENST00000260054 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
CCDC90B-201ENST00000260054 MT1XP80297 61 aa6.61□□□□□ -1.35
CCDC90B-201ENST00000260054 CAMK2N1Q7Z7J9 78 aa6.56□□□□□ -1.36
CCDC90B-201ENST00000260054 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
CCDC90B-201ENST00000260054 LCE1DQ5T752 114 aa6.46□□□□□ -1.37
CCDC90B-201ENST00000260054 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.37
CCDC90B-201ENST00000260054 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CCDC90B-201ENST00000260054 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
CCDC90B-201ENST00000260054 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-201ENST00000260054 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
CCDC90B-201ENST00000260054 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
CCDC90B-201ENST00000260054 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
CCDC90B-201ENST00000260054 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
CCDC90B-201ENST00000260054 KMT2DO14686 5537 aa6.23□□□□□ -1.41
CCDC90B-201ENST00000260054 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
CCDC90B-201ENST00000260054 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
CCDC90B-201ENST00000260054 TNP1P09430 55 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms