RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 IGKV2D-30A0A075B6S6 120 aa5□□□□□ -1.61
NIP7-202ENST00000254941 TMEM258P61165 79 aa5□□□□□ -1.61
NIP7-202ENST00000254941 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
NIP7-202ENST00000254941 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
NIP7-202ENST00000254941 SPINK7P58062 85 aa4.97□□□□□ -1.61
NIP7-202ENST00000254941 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
NIP7-202ENST00000254941 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
NIP7-202ENST00000254941 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
NIP7-202ENST00000254941 HRES1P13985 223 aa4.94□□□□□ -1.62
NIP7-202ENST00000254941 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
NIP7-202ENST00000254941 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
NIP7-202ENST00000254941 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
NIP7-202ENST00000254941 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
NIP7-202ENST00000254941 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
NIP7-202ENST00000254941 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
NIP7-202ENST00000254941 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
NIP7-202ENST00000254941 A8MUN3 132 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 ACYP2P14621 99 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
NIP7-202ENST00000254941 COX6B2Q6YFQ2 88 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
NIP7-202ENST00000254941 COA5Q86WW8 74 aa4.81□□□□□ -1.64
NIP7-202ENST00000254941 RBM12B-AS1Q9P1G2 102 aa4.78□□□□□ -1.64
NIP7-202ENST00000254941 MUC2Q02817 5179 aa4.76□□□□□ -1.65
NIP7-202ENST00000254941 CHKB-CPT1BH3BT56 60 aa4.74□□□□□ -1.65
NIP7-202ENST00000254941 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
NIP7-202ENST00000254941 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
NIP7-202ENST00000254941 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
NIP7-202ENST00000254941 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
NIP7-202ENST00000254941 LCA10Q71F78 164 aa4.68□□□□□ -1.66
NIP7-202ENST00000254941 S4R3F8 94 aa4.68□□□□□ -1.66
NIP7-202ENST00000254941 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
NIP7-202ENST00000254941 Q1T7F1 81 aa4.64□□□□□ -1.67
NIP7-202ENST00000254941 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
NIP7-202ENST00000254941 V9GYY9 64 aa4.62□□□□□ -1.67
NIP7-202ENST00000254941 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
NIP7-202ENST00000254941 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
NIP7-202ENST00000254941 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
NIP7-202ENST00000254941 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
NIP7-202ENST00000254941 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
NIP7-202ENST00000254941 A0A1B0GU69 56 aa4.54□□□□□ -1.68
NIP7-202ENST00000254941 PSPHP1O15172 72 aa4.54□□□□□ -1.68
NIP7-202ENST00000254941 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
NIP7-202ENST00000254941 SEC61GP60059 68 aa4.53□□□□□ -1.68
NIP7-202ENST00000254941 MT1HP80294 61 aa4.52□□□□□ -1.69
NIP7-202ENST00000254941 Q5VV11 94 aa4.51□□□□□ -1.69
NIP7-202ENST00000254941 H0YAA0 97 aa4.5□□□□□ -1.69
NIP7-202ENST00000254941 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
NIP7-202ENST00000254941 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
NIP7-202ENST00000254941 M0R2T5 61 aa4.45□□□□□ -1.7
NIP7-202ENST00000254941 P0C880 135 aa4.45□□□□□ -1.7
NIP7-202ENST00000254941 A0A1B0GU33 70 aa4.42□□□□□ -1.7
NIP7-202ENST00000254941 A6NED7 52 aa4.41□□□□□ -1.7
NIP7-202ENST00000254941 UQCR11O14957 56 aa4.41□□□□□ -1.7
NIP7-202ENST00000254941 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
NIP7-202ENST00000254941 H3BS24 57 aa4.35□□□□□ -1.71
NIP7-202ENST00000254941 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
NIP7-202ENST00000254941 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
NIP7-202ENST00000254941 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
NIP7-202ENST00000254941 M0QZ58 72 aa4.34□□□□□ -1.71
NIP7-202ENST00000254941 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
NIP7-202ENST00000254941 MT2AP02795 61 aa4.32□□□□□ -1.72
NIP7-202ENST00000254941 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
NIP7-202ENST00000254941 R4GN34 69 aa4.32□□□□□ -1.72
NIP7-202ENST00000254941 CRIPTQ9P021 101 aa4.31□□□□□ -1.72
NIP7-202ENST00000254941 A8MU10 97 aa4.3□□□□□ -1.72
NIP7-202ENST00000254941 MT1FP04733 61 aa4.29□□□□□ -1.72
NIP7-202ENST00000254941 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
NIP7-202ENST00000254941 A0A0D9SG42 100 aa4.24□□□□□ -1.73
NIP7-202ENST00000254941 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
NIP7-202ENST00000254941 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
NIP7-202ENST00000254941 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
NIP7-202ENST00000254941 A6NN06 94 aa4.18□□□□□ -1.74
NIP7-202ENST00000254941 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
NIP7-202ENST00000254941 K7ERS5 55 aa4.15□□□□□ -1.74
NIP7-202ENST00000254941 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.74
NIP7-202ENST00000254941 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
NIP7-202ENST00000254941 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
NIP7-202ENST00000254941 MT1BP07438 61 aa4.07□□□□□ -1.76
NIP7-202ENST00000254941 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
NIP7-202ENST00000254941 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
NIP7-202ENST00000254941 ROMO1P60602 79 aa3.98□□□□□ -1.77
NIP7-202ENST00000254941 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
NIP7-202ENST00000254941 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
NIP7-202ENST00000254941 MT1XP80297 61 aa3.93□□□□□ -1.78
NIP7-202ENST00000254941 USH2AO75445 5202 aa3.93□□□□□ -1.78
NIP7-202ENST00000254941 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
NIP7-202ENST00000254941 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
NIP7-202ENST00000254941 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
NIP7-202ENST00000254941 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
NIP7-202ENST00000254941 TNP1P09430 55 aa3.84□□□□□ -1.79
NIP7-202ENST00000254941 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
NIP7-202ENST00000254941 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
NIP7-202ENST00000254941 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
NIP7-202ENST00000254941 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
NIP7-202ENST00000254941 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
NIP7-202ENST00000254941 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
NIP7-202ENST00000254941 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms