RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 LCA10Q71F78 164 aa6.06□□□□□ -1.44
CLUHP3-201ENST00000254109 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
CLUHP3-201ENST00000254109 LPAP08519 4548 aa6.05□□□□□ -1.44
CLUHP3-201ENST00000254109 A8MU10 97 aa6.04□□□□□ -1.44
CLUHP3-201ENST00000254109 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
CLUHP3-201ENST00000254109 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
CLUHP3-201ENST00000254109 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
CLUHP3-201ENST00000254109 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
CLUHP3-201ENST00000254109 XP32Q5T750 250 aa5.99□□□□□ -1.45
CLUHP3-201ENST00000254109 LRP2P98164 4655 aa5.98□□□□□ -1.45
CLUHP3-201ENST00000254109 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
CLUHP3-201ENST00000254109 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
CLUHP3-201ENST00000254109 UQCR11O14957 56 aa5.95□□□□□ -1.46
CLUHP3-201ENST00000254109 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
CLUHP3-201ENST00000254109 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
CLUHP3-201ENST00000254109 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
CLUHP3-201ENST00000254109 A6NN06 94 aa5.86□□□□□ -1.47
CLUHP3-201ENST00000254109 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
CLUHP3-201ENST00000254109 A0A1B0GU33 70 aa5.81□□□□□ -1.48
CLUHP3-201ENST00000254109 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
CLUHP3-201ENST00000254109 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
CLUHP3-201ENST00000254109 S4R3F8 94 aa5.79□□□□□ -1.48
CLUHP3-201ENST00000254109 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
CLUHP3-201ENST00000254109 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
CLUHP3-201ENST00000254109 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
CLUHP3-201ENST00000254109 H0YAA0 97 aa5.73□□□□□ -1.49
CLUHP3-201ENST00000254109 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
CLUHP3-201ENST00000254109 MUC2Q02817 5179 aa5.71□□□□□ -1.5
CLUHP3-201ENST00000254109 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
CLUHP3-201ENST00000254109 KRTAP10-6P60371 365 aaPredicted RBP5.64□□□□□ -1.51
CLUHP3-201ENST00000254109 K7ERS5 55 aa5.62□□□□□ -1.51
CLUHP3-201ENST00000254109 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
CLUHP3-201ENST00000254109 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
CLUHP3-201ENST00000254109 ADM2Q7Z4H4 148 aa5.58□□□□□ -1.52
CLUHP3-201ENST00000254109 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
CLUHP3-201ENST00000254109 P0C880 135 aa5.56□□□□□ -1.52
CLUHP3-201ENST00000254109 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
CLUHP3-201ENST00000254109 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
CLUHP3-201ENST00000254109 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
CLUHP3-201ENST00000254109 A0A0D9SG42 100 aa5.52□□□□□ -1.53
CLUHP3-201ENST00000254109 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
CLUHP3-201ENST00000254109 M0QZ58 72 aa5.46□□□□□ -1.53
CLUHP3-201ENST00000254109 MT1HP80294 61 aa5.42□□□□□ -1.54
CLUHP3-201ENST00000254109 ROMO1P60602 79 aa5.41□□□□□ -1.54
CLUHP3-201ENST00000254109 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
CLUHP3-201ENST00000254109 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
CLUHP3-201ENST00000254109 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
CLUHP3-201ENST00000254109 R4GN34 69 aa5.36□□□□□ -1.55
CLUHP3-201ENST00000254109 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CLUHP3-201ENST00000254109 M0R2T5 61 aa5.35□□□□□ -1.55
CLUHP3-201ENST00000254109 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
CLUHP3-201ENST00000254109 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
CLUHP3-201ENST00000254109 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
CLUHP3-201ENST00000254109 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
CLUHP3-201ENST00000254109 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
CLUHP3-201ENST00000254109 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
CLUHP3-201ENST00000254109 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
CLUHP3-201ENST00000254109 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
CLUHP3-201ENST00000254109 MT2AP02795 61 aa5.16□□□□□ -1.58
CLUHP3-201ENST00000254109 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
CLUHP3-201ENST00000254109 MT1FP04733 61 aa5.13□□□□□ -1.59
CLUHP3-201ENST00000254109 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
CLUHP3-201ENST00000254109 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
CLUHP3-201ENST00000254109 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
CLUHP3-201ENST00000254109 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
CLUHP3-201ENST00000254109 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
CLUHP3-201ENST00000254109 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
CLUHP3-201ENST00000254109 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CLUHP3-201ENST00000254109 LCE2BO14633 110 aa4.93□□□□□ -1.62
CLUHP3-201ENST00000254109 PLAC4Q8WY50 150 aa4.93□□□□□ -1.62
CLUHP3-201ENST00000254109 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
CLUHP3-201ENST00000254109 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
CLUHP3-201ENST00000254109 TNP1P09430 55 aa4.87□□□□□ -1.63
CLUHP3-201ENST00000254109 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
CLUHP3-201ENST00000254109 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
CLUHP3-201ENST00000254109 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
CLUHP3-201ENST00000254109 USH2AO75445 5202 aa4.82□□□□□ -1.64
CLUHP3-201ENST00000254109 MT1BP07438 61 aa4.81□□□□□ -1.64
CLUHP3-201ENST00000254109 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
CLUHP3-201ENST00000254109 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
CLUHP3-201ENST00000254109 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
CLUHP3-201ENST00000254109 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
CLUHP3-201ENST00000254109 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
CLUHP3-201ENST00000254109 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
CLUHP3-201ENST00000254109 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
CLUHP3-201ENST00000254109 MT1XP80297 61 aa4.61□□□□□ -1.67
CLUHP3-201ENST00000254109 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
CLUHP3-201ENST00000254109 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
CLUHP3-201ENST00000254109 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
CLUHP3-201ENST00000254109 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
CLUHP3-201ENST00000254109 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
CLUHP3-201ENST00000254109 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CLUHP3-201ENST00000254109 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
CLUHP3-201ENST00000254109 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
CLUHP3-201ENST00000254109 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
CLUHP3-201ENST00000254109 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
CLUHP3-201ENST00000254109 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
CLUHP3-201ENST00000254109 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
CLUHP3-201ENST00000254109 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
CLUHP3-201ENST00000254109 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms