RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SEC61BP60468 96 aaKnown RBP11.87□□□□□ -0.51
SYNGR3-201ENST00000248121 PRO0628Q9UI54 55 aa11.87□□□□□ -0.51
SYNGR3-201ENST00000248121 MUC17Q685J3 4493 aa11.87□□□□□ -0.51
SYNGR3-201ENST00000248121 A0A1B0GU69 56 aa11.87□□□□□ -0.51
SYNGR3-201ENST00000248121 A8MU10 97 aa11.85□□□□□ -0.51
SYNGR3-201ENST00000248121 A6NED7 52 aa11.83□□□□□ -0.52
SYNGR3-201ENST00000248121 SPTSSBQ8NFR3 76 aa11.82□□□□□ -0.52
SYNGR3-201ENST00000248121 LCA10Q71F78 164 aa11.77□□□□□ -0.52
SYNGR3-201ENST00000248121 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
SYNGR3-201ENST00000248121 MUC2Q02817 5179 aa11.73□□□□□ -0.53
SYNGR3-201ENST00000248121 CDC42SE1Q9NRR8 79 aa11.67□□□□□ -0.54
SYNGR3-201ENST00000248121 H1FX-AS1Q4G0G2 97 aa11.65□□□□□ -0.54
SYNGR3-201ENST00000248121 S4R3F8 94 aa11.64□□□□□ -0.55
SYNGR3-201ENST00000248121 UBR4Q5T4S7 5183 aa11.63□□□□□ -0.55
SYNGR3-201ENST00000248121 SEC61GP60059 68 aa11.62□□□□□ -0.55
SYNGR3-201ENST00000248121 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
SYNGR3-201ENST00000248121 UQCR11O14957 56 aa11.55□□□□□ -0.56
SYNGR3-201ENST00000248121 KRTAP19-2Q3LHN2 52 aa11.51□□□□□ -0.57
SYNGR3-201ENST00000248121 SPATA8Q6RVD6 105 aa11.51□□□□□ -0.57
SYNGR3-201ENST00000248121 MIR22HGQ0VDD5 57 aa11.48□□□□□ -0.57
SYNGR3-201ENST00000248121 RNF213Q63HN8 5207 aa11.46□□□□□ -0.58
SYNGR3-201ENST00000248121 KRTAP10-6P60371 365 aaPredicted RBP11.42□□□□□ -0.58
SYNGR3-201ENST00000248121 A0A1B0GU33 70 aa11.41□□□□□ -0.58
SYNGR3-201ENST00000248121 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
SYNGR3-201ENST00000248121 H0YAA0 97 aa11.37□□□□□ -0.59
SYNGR3-201ENST00000248121 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
SYNGR3-201ENST00000248121 PMAIP1Q13794 54 aa11.32□□□□□ -0.6
SYNGR3-201ENST00000248121 P0C880 135 aa11.27□□□□□ -0.61
SYNGR3-201ENST00000248121 A6NN06 94 aa11.26□□□□□ -0.61
SYNGR3-201ENST00000248121 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
SYNGR3-201ENST00000248121 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
SYNGR3-201ENST00000248121 FLGP20930 4061 aaPredicted RBP11.23□□□□□ -0.61
SYNGR3-201ENST00000248121 ADM2Q7Z4H4 148 aa11.22□□□□□ -0.61
SYNGR3-201ENST00000248121 KRTAP13-4Q3LI77 160 aa11.19□□□□□ -0.62
SYNGR3-201ENST00000248121 MT1HP80294 61 aa11□□□□□ -0.65
SYNGR3-201ENST00000248121 A0A0D9SG42 100 aa10.95□□□□□ -0.66
SYNGR3-201ENST00000248121 KTN1-AS1Q86SY8 53 aa10.94□□□□□ -0.66
SYNGR3-201ENST00000248121 M0QZ58 72 aa10.88□□□□□ -0.67
SYNGR3-201ENST00000248121 LORP23490 312 aaPredicted RBP10.86□□□□□ -0.67
SYNGR3-201ENST00000248121 M0R2T5 61 aa10.83□□□□□ -0.68
SYNGR3-201ENST00000248121 K7ERS5 55 aa10.78□□□□□ -0.68
SYNGR3-201ENST00000248121 R4GN34 69 aa10.75□□□□□ -0.69
SYNGR3-201ENST00000248121 KRTAP12-2P59991 146 aa10.74□□□□□ -0.69
SYNGR3-201ENST00000248121 KRTAP12-1P59990 96 aa10.72□□□□□ -0.69
SYNGR3-201ENST00000248121 PRAC1Q96KF2 57 aa10.67□□□□□ -0.7
SYNGR3-201ENST00000248121 LINC01554Q52M75 96 aa10.63□□□□□ -0.71
SYNGR3-201ENST00000248121 SPINT4Q6UDR6 99 aa10.63□□□□□ -0.71
SYNGR3-201ENST00000248121 KRTAP9-8Q9BYQ0 159 aa10.59□□□□□ -0.71
SYNGR3-201ENST00000248121 LCE2AQ5TA79 106 aaPredicted RBP10.59□□□□□ -0.71
SYNGR3-201ENST00000248121 MT2AP02795 61 aa10.56□□□□□ -0.72
SYNGR3-201ENST00000248121 MT1FP04733 61 aa10.53□□□□□ -0.72
SYNGR3-201ENST00000248121 ROMO1P60602 79 aa10.49□□□□□ -0.73
SYNGR3-201ENST00000248121 CRIPTQ9P021 101 aa10.45□□□□□ -0.74
SYNGR3-201ENST00000248121 KRTAP10-10P60014 251 aa10.42□□□□□ -0.74
SYNGR3-201ENST00000248121 KRTAP19-1Q8IUB9 90 aa10.32□□□□□ -0.76
SYNGR3-201ENST00000248121 SPRR2GQ9BYE4 73 aa10.26□□□□□ -0.77
SYNGR3-201ENST00000248121 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
SYNGR3-201ENST00000248121 KRTAP9-3Q9BYQ3 159 aa10.2□□□□□ -0.78
SYNGR3-201ENST00000248121 C10orf95Q9H7T3 257 aa10.16□□□□□ -0.78
SYNGR3-201ENST00000248121 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
SYNGR3-201ENST00000248121 LCE2BO14633 110 aa9.98□□□□□ -0.81
SYNGR3-201ENST00000248121 KRTAP19-8Q3LI54 63 aa9.98□□□□□ -0.81
SYNGR3-201ENST00000248121 MT1BP07438 61 aa9.95□□□□□ -0.82
SYNGR3-201ENST00000248121 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
SYNGR3-201ENST00000248121 USH2AO75445 5202 aa9.78□□□□□ -0.84
SYNGR3-201ENST00000248121 TNP1P09430 55 aa9.66□□□□□ -0.86
SYNGR3-201ENST00000248121 MT1XP80297 61 aa9.61□□□□□ -0.87
SYNGR3-201ENST00000248121 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
SYNGR3-201ENST00000248121 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.88
SYNGR3-201ENST00000248121 PP632Q6XCG6 107 aa9.52□□□□□ -0.88
SYNGR3-201ENST00000248121 FSIP2Q5CZC0 6907 aa9.47□□□□□ -0.89
SYNGR3-201ENST00000248121 SSPOA2VEC9 5147 aa9.45□□□□□ -0.9
SYNGR3-201ENST00000248121 KRTAP23-1A1A580 65 aa9.43□□□□□ -0.9
SYNGR3-201ENST00000248121 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
SYNGR3-201ENST00000248121 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
SYNGR3-201ENST00000248121 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
SYNGR3-201ENST00000248121 KRTAP10-7P60409 375 aaPredicted RBP9.27□□□□□ -0.93
SYNGR3-201ENST00000248121 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.93
SYNGR3-201ENST00000248121 KRTAP15-1Q3LI76 137 aa9.21□□□□□ -0.93
SYNGR3-201ENST00000248121 KRTAP10-12P60413 245 aa9.15□□□□□ -0.94
SYNGR3-201ENST00000248121 KRTAP8-1Q8IUC2 63 aa9.08□□□□□ -0.96
SYNGR3-201ENST00000248121 KMT2DO14686 5537 aa9.06□□□□□ -0.96
SYNGR3-201ENST00000248121 FCGBPQ9Y6R7 5405 aaPredicted RBP9.04□□□□□ -0.96
SYNGR3-201ENST00000248121 KRTAP4-8A0A0G2JLE6 195 aa8.96□□□□□ -0.98
SYNGR3-201ENST00000248121 KRTAP4-8Q9BYQ9 185 aa8.96□□□□□ -0.98
SYNGR3-201ENST00000248121 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
SYNGR3-201ENST00000248121 KRTAP12-3P60328 96 aa8.87□□□□□ -0.99
SYNGR3-201ENST00000248121 KRTAP19-5Q3LI72 72 aa8.74□□□□□ -1.01
SYNGR3-201ENST00000248121 SPRR5A0A1B0GTR4 108 aa8.7□□□□□ -1.02
SYNGR3-201ENST00000248121 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
SYNGR3-201ENST00000248121 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
SYNGR3-201ENST00000248121 KRTAP19-7Q3SYF9 63 aa8.58□□□□□ -1.04
SYNGR3-201ENST00000248121 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
SYNGR3-201ENST00000248121 LUZP6Q538Z0 58 aa8.45□□□□□ -1.06
SYNGR3-201ENST00000248121 MT1EP04732 61 aa8.41□□□□□ -1.06
SYNGR3-201ENST00000248121 H3BS24 57 aa8.39□□□□□ -1.07
SYNGR3-201ENST00000248121 SYNE2Q8WXH0 6885 aaKnown RBP8.37□□□□□ -1.07
SYNGR3-201ENST00000248121 MUC12Q9UKN1 5478 aa8.32□□□□□ -1.08
SYNGR3-201ENST00000248121 LCE3CQ5T5A8 94 aa8.31□□□□□ -1.08
SYNGR3-201ENST00000248121 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms