RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 BRK1Q8WUW1 75 aa11.15□□□□□ -0.62
GCA-201ENST00000233612 RBM12B-AS1Q9P1G2 102 aa11.15□□□□□ -0.62
GCA-201ENST00000233612 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
GCA-201ENST00000233612 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
GCA-201ENST00000233612 A6NED7 52 aa11.1□□□□□ -0.63
GCA-201ENST00000233612 HERC1Q15751 4861 aa11.1□□□□□ -0.63
GCA-201ENST00000233612 LCA10Q71F78 164 aa11.09□□□□□ -0.63
GCA-201ENST00000233612 S4R3F8 94 aa11.08□□□□□ -0.64
GCA-201ENST00000233612 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
GCA-201ENST00000233612 SEC61GP60059 68 aa11.08□□□□□ -0.64
GCA-201ENST00000233612 KRTAP4-1Q9BYQ7 146 aa11.03□□□□□ -0.64
GCA-201ENST00000233612 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
GCA-201ENST00000233612 UQCR11O14957 56 aa10.95□□□□□ -0.66
GCA-201ENST00000233612 A8MU10 97 aa10.92□□□□□ -0.66
GCA-201ENST00000233612 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
GCA-201ENST00000233612 KRTAP19-2Q3LHN2 52 aa10.86□□□□□ -0.67
GCA-201ENST00000233612 CSAG1Q6PB30 78 aa10.85□□□□□ -0.67
GCA-201ENST00000233612 MIR22HGQ0VDD5 57 aa10.83□□□□□ -0.68
GCA-201ENST00000233612 A0A1B0GU33 70 aa10.82□□□□□ -0.68
GCA-201ENST00000233612 KRTAP10-6P60371 365 aaPredicted RBP10.8□□□□□ -0.68
GCA-201ENST00000233612 SVIPQ8NHG7 77 aa10.8□□□□□ -0.68
GCA-201ENST00000233612 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
GCA-201ENST00000233612 H0YAA0 97 aa10.7□□□□□ -0.7
GCA-201ENST00000233612 MUC2Q02817 5179 aa10.65□□□□□ -0.7
GCA-201ENST00000233612 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
GCA-201ENST00000233612 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
GCA-201ENST00000233612 P0C880 135 aa10.62□□□□□ -0.71
GCA-201ENST00000233612 PMAIP1Q13794 54 aa10.58□□□□□ -0.72
GCA-201ENST00000233612 A6NN06 94 aa10.53□□□□□ -0.72
GCA-201ENST00000233612 KRTAP13-4Q3LI77 160 aa10.5□□□□□ -0.73
GCA-201ENST00000233612 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
GCA-201ENST00000233612 RNF213Q63HN8 5207 aa10.46□□□□□ -0.73
GCA-201ENST00000233612 M0QZ58 72 aa10.44□□□□□ -0.74
GCA-201ENST00000233612 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
GCA-201ENST00000233612 K7ERS5 55 aa10.28□□□□□ -0.76
GCA-201ENST00000233612 A0A0D9SG42 100 aa10.25□□□□□ -0.77
GCA-201ENST00000233612 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
GCA-201ENST00000233612 KTN1-AS1Q86SY8 53 aa10.24□□□□□ -0.77
GCA-201ENST00000233612 R4GN34 69 aa10.23□□□□□ -0.77
GCA-201ENST00000233612 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.78
GCA-201ENST00000233612 MT1HP80294 61 aa10.21□□□□□ -0.78
GCA-201ENST00000233612 CRIPTQ9P021 101 aa10.14□□□□□ -0.79
GCA-201ENST00000233612 KRTAP12-1P59990 96 aa10.13□□□□□ -0.79
GCA-201ENST00000233612 KRTAP12-2P59991 146 aa10.09□□□□□ -0.79
GCA-201ENST00000233612 M0R2T5 61 aa10.05□□□□□ -0.8
GCA-201ENST00000233612 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
GCA-201ENST00000233612 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
GCA-201ENST00000233612 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
GCA-201ENST00000233612 ROMO1P60602 79 aa9.93□□□□□ -0.82
GCA-201ENST00000233612 KRTAP9-8Q9BYQ0 159 aa9.9□□□□□ -0.82
GCA-201ENST00000233612 MT2AP02795 61 aa9.87□□□□□ -0.83
GCA-201ENST00000233612 SPRR2GQ9BYE4 73 aa9.86□□□□□ -0.83
GCA-201ENST00000233612 PRAC1Q96KF2 57 aa9.84□□□□□ -0.83
GCA-201ENST00000233612 MT1FP04733 61 aa9.8□□□□□ -0.84
GCA-201ENST00000233612 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.84
GCA-201ENST00000233612 KRTAP10-10P60014 251 aa9.76□□□□□ -0.85
GCA-201ENST00000233612 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
GCA-201ENST00000233612 KRTAP25-1Q3LHN0 102 aa9.62□□□□□ -0.87
GCA-201ENST00000233612 CAMK2N1Q7Z7J9 78 aa9.58□□□□□ -0.88
GCA-201ENST00000233612 C10orf95Q9H7T3 257 aa9.58□□□□□ -0.88
GCA-201ENST00000233612 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
GCA-201ENST00000233612 KRTAP9-3Q9BYQ3 159 aa9.54□□□□□ -0.88
GCA-201ENST00000233612 PLAC4Q8WY50 150 aa9.52□□□□□ -0.89
GCA-201ENST00000233612 MT1BP07438 61 aa9.37□□□□□ -0.91
GCA-201ENST00000233612 TNP1P09430 55 aa9.23□□□□□ -0.93
GCA-201ENST00000233612 LCE2BO14633 110 aa9.2□□□□□ -0.94
GCA-201ENST00000233612 PP632Q6XCG6 107 aa9.15□□□□□ -0.94
GCA-201ENST00000233612 KRTAP23-1A1A580 65 aa9.13□□□□□ -0.95
GCA-201ENST00000233612 KRTAP10-5P60370 271 aa9.12□□□□□ -0.95
GCA-201ENST00000233612 MT1XP80297 61 aa9.12□□□□□ -0.95
GCA-201ENST00000233612 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
GCA-201ENST00000233612 USH2AO75445 5202 aa8.93□□□□□ -0.98
GCA-201ENST00000233612 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
GCA-201ENST00000233612 KRTAP10-7P60409 375 aaPredicted RBP8.75□□□□□ -1.01
GCA-201ENST00000233612 KRTAP10-12P60413 245 aa8.7□□□□□ -1.02
GCA-201ENST00000233612 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
GCA-201ENST00000233612 SSPOA2VEC9 5147 aa8.63□□□□□ -1.03
GCA-201ENST00000233612 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
GCA-201ENST00000233612 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
GCA-201ENST00000233612 KRTAP12-3P60328 96 aa8.43□□□□□ -1.06
GCA-201ENST00000233612 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
GCA-201ENST00000233612 KRTAP4-8Q9BYQ9 185 aa8.33□□□□□ -1.08
GCA-201ENST00000233612 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
GCA-201ENST00000233612 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
GCA-201ENST00000233612 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
GCA-201ENST00000233612 KRTAP19-5Q3LI72 72 aa8.27□□□□□ -1.08
GCA-201ENST00000233612 KMT2DO14686 5537 aa8.26□□□□□ -1.09
GCA-201ENST00000233612 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
GCA-201ENST00000233612 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.1
GCA-201ENST00000233612 FCGBPQ9Y6R7 5405 aaPredicted RBP8.15□□□□□ -1.1
GCA-201ENST00000233612 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
GCA-201ENST00000233612 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
GCA-201ENST00000233612 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
GCA-201ENST00000233612 MT1EP04732 61 aa7.98□□□□□ -1.13
GCA-201ENST00000233612 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
GCA-201ENST00000233612 LCE3CQ5T5A8 94 aa7.91□□□□□ -1.14
GCA-201ENST00000233612 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
GCA-201ENST00000233612 MT1LQ93083 61 aa7.86□□□□□ -1.15
GCA-201ENST00000233612 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
GCA-201ENST00000233612 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms