RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 S4R3F8 94 aa11.9□□□□□ -0.5
RRP9-201ENST00000232888 PRR15LQ9BU68 103 aa11.86□□□□□ -0.51
RRP9-201ENST00000232888 PSPHP1O15172 72 aa11.84□□□□□ -0.51
RRP9-201ENST00000232888 LCA10Q71F78 164 aa11.84□□□□□ -0.51
RRP9-201ENST00000232888 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
RRP9-201ENST00000232888 A0A1B0GU69 56 aa11.78□□□□□ -0.52
RRP9-201ENST00000232888 Q5VV11 94 aa11.78□□□□□ -0.52
RRP9-201ENST00000232888 SEC61GP60059 68 aa11.75□□□□□ -0.53
RRP9-201ENST00000232888 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
RRP9-201ENST00000232888 CSAG1Q6PB30 78 aa11.67□□□□□ -0.54
RRP9-201ENST00000232888 A6NED7 52 aa11.53□□□□□ -0.56
RRP9-201ENST00000232888 H0YAA0 97 aa11.46□□□□□ -0.57
RRP9-201ENST00000232888 UQCR11O14957 56 aa11.46□□□□□ -0.57
RRP9-201ENST00000232888 BRK1Q8WUW1 75 aa11.44□□□□□ -0.58
RRP9-201ENST00000232888 MUC2Q02817 5179 aa11.42□□□□□ -0.58
RRP9-201ENST00000232888 A0A1B0GU33 70 aa11.41□□□□□ -0.58
RRP9-201ENST00000232888 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
RRP9-201ENST00000232888 KRTAP10-6P60371 365 aaPredicted RBP11.41□□□□□ -0.58
RRP9-201ENST00000232888 LCE2CQ5TA81 110 aa11.39□□□□□ -0.59
RRP9-201ENST00000232888 CDC42SE1Q9NRR8 79 aa11.37□□□□□ -0.59
RRP9-201ENST00000232888 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
RRP9-201ENST00000232888 ADM2Q7Z4H4 148 aa11.37□□□□□ -0.59
RRP9-201ENST00000232888 RNF213Q63HN8 5207 aa11.36□□□□□ -0.59
RRP9-201ENST00000232888 SPATA8Q6RVD6 105 aa11.33□□□□□ -0.6
RRP9-201ENST00000232888 MIR22HGQ0VDD5 57 aa11.32□□□□□ -0.6
RRP9-201ENST00000232888 FLGP20930 4061 aaPredicted RBP11.32□□□□□ -0.6
RRP9-201ENST00000232888 PRO0628Q9UI54 55 aa11.28□□□□□ -0.6
RRP9-201ENST00000232888 P0C880 135 aa11.28□□□□□ -0.6
RRP9-201ENST00000232888 A8MU10 97 aa11.17□□□□□ -0.62
RRP9-201ENST00000232888 MT1HP80294 61 aa11.16□□□□□ -0.62
RRP9-201ENST00000232888 M0QZ58 72 aa11.11□□□□□ -0.63
RRP9-201ENST00000232888 M0R2T5 61 aa11.08□□□□□ -0.64
RRP9-201ENST00000232888 KRTAP13-4Q3LI77 160 aa11.05□□□□□ -0.64
RRP9-201ENST00000232888 FAT4Q6V0I7 4981 aa10.99□□□□□ -0.65
RRP9-201ENST00000232888 R4GN34 69 aa10.98□□□□□ -0.65
RRP9-201ENST00000232888 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
RRP9-201ENST00000232888 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
RRP9-201ENST00000232888 A0A0D9SG42 100 aa10.86□□□□□ -0.67
RRP9-201ENST00000232888 K7ERS5 55 aa10.86□□□□□ -0.67
RRP9-201ENST00000232888 PMAIP1Q13794 54 aa10.85□□□□□ -0.67
RRP9-201ENST00000232888 A6NN06 94 aa10.77□□□□□ -0.69
RRP9-201ENST00000232888 KRTAP9-8Q9BYQ0 159 aa10.77□□□□□ -0.69
RRP9-201ENST00000232888 MT2AP02795 61 aa10.74□□□□□ -0.69
RRP9-201ENST00000232888 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
RRP9-201ENST00000232888 KRTAP12-1P59990 96 aa10.69□□□□□ -0.7
RRP9-201ENST00000232888 KRTAP10-10P60014 251 aa10.68□□□□□ -0.7
RRP9-201ENST00000232888 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
RRP9-201ENST00000232888 MT1FP04733 61 aa10.67□□□□□ -0.7
RRP9-201ENST00000232888 KRTAP12-2P59991 146 aa10.64□□□□□ -0.71
RRP9-201ENST00000232888 SPINT4Q6UDR6 99 aa10.63□□□□□ -0.71
RRP9-201ENST00000232888 SPRR2GQ9BYE4 73 aa10.63□□□□□ -0.71
RRP9-201ENST00000232888 SVIPQ8NHG7 77 aa10.58□□□□□ -0.72
RRP9-201ENST00000232888 KRTAP19-1Q8IUB9 90 aa10.53□□□□□ -0.72
RRP9-201ENST00000232888 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
RRP9-201ENST00000232888 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
RRP9-201ENST00000232888 ROMO1P60602 79 aa10.37□□□□□ -0.75
RRP9-201ENST00000232888 KRTAP19-8Q3LI54 63 aa10.35□□□□□ -0.75
RRP9-201ENST00000232888 PLAC4Q8WY50 150 aa10.31□□□□□ -0.76
RRP9-201ENST00000232888 CAMK2N1Q7Z7J9 78 aa10.29□□□□□ -0.76
RRP9-201ENST00000232888 MT1BP07438 61 aa10.14□□□□□ -0.79
RRP9-201ENST00000232888 C10orf95Q9H7T3 257 aa10.1□□□□□ -0.79
RRP9-201ENST00000232888 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
RRP9-201ENST00000232888 LCE2BO14633 110 aa10.04□□□□□ -0.8
RRP9-201ENST00000232888 KRTAP25-1Q3LHN0 102 aa9.94□□□□□ -0.82
RRP9-201ENST00000232888 TNP1P09430 55 aa9.84□□□□□ -0.83
RRP9-201ENST00000232888 MT1XP80297 61 aa9.83□□□□□ -0.84
RRP9-201ENST00000232888 KRTAP10-5P60370 271 aa9.82□□□□□ -0.84
RRP9-201ENST00000232888 PRO2289Q9P1D8 64 aa9.81□□□□□ -0.84
RRP9-201ENST00000232888 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
RRP9-201ENST00000232888 KRTAP23-1A1A580 65 aa9.66□□□□□ -0.86
RRP9-201ENST00000232888 PP632Q6XCG6 107 aa9.66□□□□□ -0.86
RRP9-201ENST00000232888 USH2AO75445 5202 aa9.65□□□□□ -0.86
RRP9-201ENST00000232888 KRTAP19-6Q3LI70 58 aa9.48□□□□□ -0.89
RRP9-201ENST00000232888 KRTAP10-7P60409 375 aaPredicted RBP9.41□□□□□ -0.9
RRP9-201ENST00000232888 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
RRP9-201ENST00000232888 SSPOA2VEC9 5147 aa9.34□□□□□ -0.91
RRP9-201ENST00000232888 LCE3AQ5TA76 89 aa9.33□□□□□ -0.92
RRP9-201ENST00000232888 KRTAP8-1Q8IUC2 63 aa9.22□□□□□ -0.93
RRP9-201ENST00000232888 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
RRP9-201ENST00000232888 FSIP2Q5CZC0 6907 aa9.12□□□□□ -0.95
RRP9-201ENST00000232888 KRTAP12-3P60328 96 aa9□□□□□ -0.97
RRP9-201ENST00000232888 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
RRP9-201ENST00000232888 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
RRP9-201ENST00000232888 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
RRP9-201ENST00000232888 FCGBPQ9Y6R7 5405 aaPredicted RBP8.92□□□□□ -0.98
RRP9-201ENST00000232888 KRTAP19-5Q3LI72 72 aa8.89□□□□□ -0.99
RRP9-201ENST00000232888 KRTAP15-1Q3LI76 137 aa8.86□□□□□ -0.99
RRP9-201ENST00000232888 KRTAP19-7Q3SYF9 63 aa8.76□□□□□ -1.01
RRP9-201ENST00000232888 KMT2DO14686 5537 aa8.75□□□□□ -1.01
RRP9-201ENST00000232888 MT1EP04732 61 aa8.62□□□□□ -1.03
RRP9-201ENST00000232888 KRTAP19-4Q3LI73 84 aa8.6□□□□□ -1.03
RRP9-201ENST00000232888 SPRR5A0A1B0GTR4 108 aa8.53□□□□□ -1.04
RRP9-201ENST00000232888 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
RRP9-201ENST00000232888 MT1LQ93083 61 aa8.46□□□□□ -1.06
RRP9-201ENST00000232888 LCE3CQ5T5A8 94 aa8.42□□□□□ -1.06
RRP9-201ENST00000232888 MACF1Q9UPN3 7388 aaKnown RBP8.41□□□□□ -1.06
RRP9-201ENST00000232888 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
RRP9-201ENST00000232888 KRTAP5-9P26371 169 aa8.31□□□□□ -1.08
RRP9-201ENST00000232888 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
RRP9-201ENST00000232888 KRTAP19-3Q7Z4W3 81 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms