RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
LSM5-201ENST00000223084 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
LSM5-201ENST00000223084 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
LSM5-201ENST00000223084 OCR1Q9BZK8 76 aa6.08□□□□□ -1.44
LSM5-201ENST00000223084 TRAV22A0A0B4J277 110 aa6.07□□□□□ -1.44
LSM5-201ENST00000223084 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
LSM5-201ENST00000223084 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
LSM5-201ENST00000223084 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
LSM5-201ENST00000223084 ATOX1O00244 68 aa6.04□□□□□ -1.44
LSM5-201ENST00000223084 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
LSM5-201ENST00000223084 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
LSM5-201ENST00000223084 H0Y9P7 68 aa6.02□□□□□ -1.45
LSM5-201ENST00000223084 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
LSM5-201ENST00000223084 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
LSM5-201ENST00000223084 LOC101927531A0A1B0GV80 90 aa6□□□□□ -1.45
LSM5-201ENST00000223084 C5orf47Q569G3 176 aa6□□□□□ -1.45
LSM5-201ENST00000223084 LCE4AQ5TA78 99 aa6□□□□□ -1.45
LSM5-201ENST00000223084 MP68P56378 58 aa5.99□□□□□ -1.45
LSM5-201ENST00000223084 USH2AO75445 5202 aa5.99□□□□□ -1.45
LSM5-201ENST00000223084 H3BPC8 53 aa5.98□□□□□ -1.45
LSM5-201ENST00000223084 S4R3F8 94 aa5.97□□□□□ -1.45
LSM5-201ENST00000223084 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
LSM5-201ENST00000223084 LCA10Q71F78 164 aa5.95□□□□□ -1.46
LSM5-201ENST00000223084 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
LSM5-201ENST00000223084 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
LSM5-201ENST00000223084 SERP2Q8N6R1 65 aa5.94□□□□□ -1.46
LSM5-201ENST00000223084 LINC00208Q96KT6 92 aa5.94□□□□□ -1.46
LSM5-201ENST00000223084 KLKP1Q107X0 134 aa5.9□□□□□ -1.46
LSM5-201ENST00000223084 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
LSM5-201ENST00000223084 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
LSM5-201ENST00000223084 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
LSM5-201ENST00000223084 COX7CP15954 63 aa5.86□□□□□ -1.47
LSM5-201ENST00000223084 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
LSM5-201ENST00000223084 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
LSM5-201ENST00000223084 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
LSM5-201ENST00000223084 A8MUN3 132 aa5.78□□□□□ -1.48
LSM5-201ENST00000223084 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
LSM5-201ENST00000223084 NDUFC1O43677 76 aa5.77□□□□□ -1.49
LSM5-201ENST00000223084 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
LSM5-201ENST00000223084 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
LSM5-201ENST00000223084 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
LSM5-201ENST00000223084 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
LSM5-201ENST00000223084 H7BZZ5 65 aa5.69□□□□□ -1.5
LSM5-201ENST00000223084 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
LSM5-201ENST00000223084 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
LSM5-201ENST00000223084 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
LSM5-201ENST00000223084 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
LSM5-201ENST00000223084 NEBP20929 6669 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 H0YAA0 97 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 MT1BP07438 61 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 PCP4P48539 62 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
LSM5-201ENST00000223084 ACYP2P14621 99 aa5.63□□□□□ -1.51
LSM5-201ENST00000223084 Q5VV11 94 aa5.63□□□□□ -1.51
LSM5-201ENST00000223084 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
LSM5-201ENST00000223084 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
LSM5-201ENST00000223084 P0C880 135 aa5.56□□□□□ -1.52
LSM5-201ENST00000223084 TMEM258P61165 79 aa5.56□□□□□ -1.52
LSM5-201ENST00000223084 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
LSM5-201ENST00000223084 A6NN06 94 aa5.52□□□□□ -1.53
LSM5-201ENST00000223084 COA5Q86WW8 74 aa5.52□□□□□ -1.53
LSM5-201ENST00000223084 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
LSM5-201ENST00000223084 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
LSM5-201ENST00000223084 R4GN34 69 aa5.47□□□□□ -1.53
LSM5-201ENST00000223084 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
LSM5-201ENST00000223084 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
LSM5-201ENST00000223084 M0QZ58 72 aa5.45□□□□□ -1.54
LSM5-201ENST00000223084 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
LSM5-201ENST00000223084 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
LSM5-201ENST00000223084 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
LSM5-201ENST00000223084 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
LSM5-201ENST00000223084 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
LSM5-201ENST00000223084 MT1XP80297 61 aa5.33□□□□□ -1.56
LSM5-201ENST00000223084 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
LSM5-201ENST00000223084 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
LSM5-201ENST00000223084 KMT2DO14686 5537 aa5.29□□□□□ -1.56
LSM5-201ENST00000223084 SEC61GP60059 68 aa5.28□□□□□ -1.56
LSM5-201ENST00000223084 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
LSM5-201ENST00000223084 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
LSM5-201ENST00000223084 RPS28P62857 69 aaKnown RBP5.24□□□□□ -1.57
LSM5-201ENST00000223084 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
LSM5-201ENST00000223084 A0A1B0GU69 56 aa5.23□□□□□ -1.57
LSM5-201ENST00000223084 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
LSM5-201ENST00000223084 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
LSM5-201ENST00000223084 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
LSM5-201ENST00000223084 V9GYY9 64 aa5.18□□□□□ -1.58
LSM5-201ENST00000223084 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
LSM5-201ENST00000223084 Q1T7F1 81 aa5.15□□□□□ -1.59
LSM5-201ENST00000223084 A0A1B0GU33 70 aa5.14□□□□□ -1.59
LSM5-201ENST00000223084 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
LSM5-201ENST00000223084 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
LSM5-201ENST00000223084 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
LSM5-201ENST00000223084 A0A0D9SG42 100 aa5.11□□□□□ -1.59
LSM5-201ENST00000223084 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
LSM5-201ENST00000223084 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
LSM5-201ENST00000223084 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
LSM5-201ENST00000223084 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
LSM5-201ENST00000223084 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
LSM5-201ENST00000223084 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 529.7 ms