RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
PAF1-201ENST00000221265 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
PAF1-201ENST00000221265 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
PAF1-201ENST00000221265 A0A1B0GU69 56 aa7.98□□□□□ -1.13
PAF1-201ENST00000221265 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
PAF1-201ENST00000221265 A6NN06 94 aa7.9□□□□□ -1.15
PAF1-201ENST00000221265 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.15
PAF1-201ENST00000221265 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
PAF1-201ENST00000221265 UQCR11O14957 56 aa7.82□□□□□ -1.16
PAF1-201ENST00000221265 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
PAF1-201ENST00000221265 KTN1-AS1Q86SY8 53 aa7.79□□□□□ -1.16
PAF1-201ENST00000221265 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
PAF1-201ENST00000221265 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
PAF1-201ENST00000221265 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
PAF1-201ENST00000221265 SEC61GP60059 68 aa7.76□□□□□ -1.17
PAF1-201ENST00000221265 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
PAF1-201ENST00000221265 MUC2Q02817 5179 aa7.75□□□□□ -1.17
PAF1-201ENST00000221265 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
PAF1-201ENST00000221265 H0YAA0 97 aa7.61□□□□□ -1.19
PAF1-201ENST00000221265 A0A1B0GU33 70 aa7.6□□□□□ -1.19
PAF1-201ENST00000221265 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
PAF1-201ENST00000221265 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
PAF1-201ENST00000221265 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
PAF1-201ENST00000221265 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
PAF1-201ENST00000221265 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
PAF1-201ENST00000221265 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
PAF1-201ENST00000221265 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
PAF1-201ENST00000221265 S4R3F8 94 aa7.48□□□□□ -1.21
PAF1-201ENST00000221265 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
PAF1-201ENST00000221265 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
PAF1-201ENST00000221265 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
PAF1-201ENST00000221265 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
PAF1-201ENST00000221265 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
PAF1-201ENST00000221265 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
PAF1-201ENST00000221265 P0C880 135 aa7.32□□□□□ -1.24
PAF1-201ENST00000221265 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
PAF1-201ENST00000221265 K7ERS5 55 aa7.28□□□□□ -1.24
PAF1-201ENST00000221265 A0A0D9SG42 100 aa7.25□□□□□ -1.25
PAF1-201ENST00000221265 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
PAF1-201ENST00000221265 MT1HP80294 61 aa7.17□□□□□ -1.26
PAF1-201ENST00000221265 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.27
PAF1-201ENST00000221265 ROMO1P60602 79 aa7.13□□□□□ -1.27
PAF1-201ENST00000221265 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
PAF1-201ENST00000221265 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
PAF1-201ENST00000221265 M0QZ58 72 aa7.08□□□□□ -1.28
PAF1-201ENST00000221265 M0R2T5 61 aa7.08□□□□□ -1.28
PAF1-201ENST00000221265 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
PAF1-201ENST00000221265 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
PAF1-201ENST00000221265 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
PAF1-201ENST00000221265 R4GN34 69 aa6.92□□□□□ -1.3
PAF1-201ENST00000221265 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
PAF1-201ENST00000221265 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
PAF1-201ENST00000221265 MT2AP02795 61 aa6.89□□□□□ -1.31
PAF1-201ENST00000221265 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
PAF1-201ENST00000221265 MT1FP04733 61 aa6.86□□□□□ -1.31
PAF1-201ENST00000221265 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
PAF1-201ENST00000221265 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
PAF1-201ENST00000221265 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
PAF1-201ENST00000221265 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
PAF1-201ENST00000221265 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
PAF1-201ENST00000221265 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
PAF1-201ENST00000221265 LCE2BO14633 110 aa6.5□□□□□ -1.37
PAF1-201ENST00000221265 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
PAF1-201ENST00000221265 MT1BP07438 61 aa6.48□□□□□ -1.37
PAF1-201ENST00000221265 USH2AO75445 5202 aa6.45□□□□□ -1.38
PAF1-201ENST00000221265 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
PAF1-201ENST00000221265 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
PAF1-201ENST00000221265 H3BS24 57 aa6.3□□□□□ -1.4
PAF1-201ENST00000221265 TNP1P09430 55 aa6.3□□□□□ -1.4
PAF1-201ENST00000221265 MT1XP80297 61 aa6.27□□□□□ -1.41
PAF1-201ENST00000221265 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
PAF1-201ENST00000221265 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
PAF1-201ENST00000221265 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
PAF1-201ENST00000221265 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
PAF1-201ENST00000221265 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
PAF1-201ENST00000221265 LCE2DQ5TA82 110 aaPredicted RBP6.21□□□□□ -1.42
PAF1-201ENST00000221265 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
PAF1-201ENST00000221265 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
PAF1-201ENST00000221265 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
PAF1-201ENST00000221265 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
PAF1-201ENST00000221265 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
PAF1-201ENST00000221265 KMT2DO14686 5537 aa5.98□□□□□ -1.45
PAF1-201ENST00000221265 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
PAF1-201ENST00000221265 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
PAF1-201ENST00000221265 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
PAF1-201ENST00000221265 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
PAF1-201ENST00000221265 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
PAF1-201ENST00000221265 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
PAF1-201ENST00000221265 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
PAF1-201ENST00000221265 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
PAF1-201ENST00000221265 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
PAF1-201ENST00000221265 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
PAF1-201ENST00000221265 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
PAF1-201ENST00000221265 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
PAF1-201ENST00000221265 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
PAF1-201ENST00000221265 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
PAF1-201ENST00000221265 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
PAF1-201ENST00000221265 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
PAF1-201ENST00000221265 MT1EP04732 61 aa5.48□□□□□ -1.53
PAF1-201ENST00000221265 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms