RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Ighv1-77A0A0G2JGS9 117 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Vsig4F6TUL9 280 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Cd24P24807 76 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Prrx2Q06348 247 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Tmem136Q3TYE7 245 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Vwc2lQ505H4 222 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Srsf2Q62093 221 aaKnown RBP10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Olfr498Q8VEW2 330 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Spcs1Q9D958 161 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Sptbn2Q68FG2 2388 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Zfhx3Q61329 3726 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 DspE9Q557 2883 aaKnown RBP10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Gm26602M0QWA4 95 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Htr1dQ61224 374 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Snrnp40Q6PE01 358 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Prima1Q810F0 153 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Ttc32Q9DAC7 148 aa10.53□□□□□ -0.72
Clcn4-203ENSMUST00000210061 Fbn2Q61555 2907 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm6525A0A0A6YW33 106 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Tmem8bB1AWJ5 472 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Il22ra1Q80XZ4 581 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Spink2Q8BMY7 86 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Klk15Q8CGR4 254 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Shisa9Q9CZN4 424 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Obox8V9GWY9 217 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Trav7-5A0A0G2JFX6 112 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 1520401A03RikA0A0J9YVH6 598 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Zfp493E9Q1L8 384 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ndufa4l2Q4FZG9 87 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 F930015N05RikQ8C3A3 210 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Mrpl16Q99N93 251 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Erg28Q9ERY9 140 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 OtorQ9JIE3 128 aa10.52□□□□□ -0.73
Clcn4-203ENSMUST00000210061 SetxA2AKX3 2646 aa10.51□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gng4P50153 75 aa10.51□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Crip3Q6Q6R3 243 aa10.51□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ncor1Q60974 2453 aa10.51□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Sertad4A7DTG3 377 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm9242J3QNY1 357 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 SbpP15501 199 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ccl6P27784 116 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm5464Q3UY29 175 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Olfr322Q5NCC8 327 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Olfr317Q5NCD6 327 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Hoxc12Q8K5B8 280 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Tcrg-V6A0A075B5Y8 134 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gpx1P11352 201 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Fgf6P21658 208 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Bsph2Q0Q236 131 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Khdc1aQ3UWR2 166 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm5105Q8C6Y9 112 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Mcrip2Q9CQB2 160 aaKnown RBP10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ufc1Q9CR09 167 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 LbhQ9CX60 105 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Trank1Q8BV79 2999 aa10.5□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Trav16d-dv11A0A075B617 117 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm3285A0A1W2P7U0 201 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Nsun4C4P6S0 806 aaKnown RBP10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm5294J3QP53 216 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Prok1Q14A28 105 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm5941Q497P9 117 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Rbfox3Q8BIF2 374 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Obp2aQ8K1H9 176 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm28038F7BCN9 126 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Aqp6Q8C4A0 293 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Dusp14Q9JLY7 198 aa10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Prrc2cQ3TLH4 2846 aaKnown RBP10.49□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ighv1-23A0A0A6YVW3 117 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 CrygbP04344 175 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Olfr311Q5NC59 308 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Cox11Q6P8I6 275 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 H2al2bA9Z055 111 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Bak1O08734 209 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Tcl1b4P56844 120 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 AW146154Q3TPQ7 468 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Hes7Q8BKT2 225 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Q9D727 114 aa10.48□□□□□ -0.73
Clcn4-203ENSMUST00000210061 P01801 115 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Tnfrsf9P20334 256 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Foxc2Q61850 494 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gm4763Q8CFJ5 196 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Igkv4-90A0A075B5L3 117 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Trav19A0A0B4J1K4 119 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Wfdc11A2A5H7 82 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Defa34D3Z0J0 93 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Ins1P01325 108 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 P06330 118 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 RbpjP31266 526 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Olfr1209Q3SXJ3 310 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Hspe1Q64433 102 aaKnown RBP10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Spink6Q8BT20 105 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Bub3Q9WVA3 326 aa10.47□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Tln1P26039 2541 aaKnown RBP10.46□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Igkv4-57A0A0A6YYE7 117 aa10.46□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Obox1Q9D350 204 aa10.46□□□□□ -0.73
Clcn4-203ENSMUST00000210061 Gata3P23772 443 aa10.46□□□□□ -0.74
Clcn4-203ENSMUST00000210061 Try10Q792Z1 246 aaKnown RBP10.46□□□□□ -0.74
Clcn4-203ENSMUST00000210061 Minos1Q7TNS2 76 aa10.46□□□□□ -0.74
Clcn4-203ENSMUST00000210061 Odf3l1Q810P2 275 aa10.45□□□□□ -0.74
Clcn4-203ENSMUST00000210061 TctaQ8VEA7 122 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms