RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 D930048N14RikA2AA67 225 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Fosl1P48755 273 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Prrx2Q06348 247 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 ElaneQ3UP87 265 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Try10Q792Z1 246 aaKnown RBP10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 RpeQ8VEE0 228 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Tmem210Q9D2F0 147 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 CklfQ9DAS1 152 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Dnajb12Q9QYI4 376 aaKnown RBP10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Npc2Q9Z0J0 149 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Tln2Q71LX4 2375 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Muc5acE9QAQ8 3455 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Ighv1-23A0A0A6YVW3 117 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Zfp493E9Q1L8 384 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Gpx1P11352 201 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Fgf6P21658 208 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Vwc2lQ505H4 222 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Srsf1Q6PDM2 248 aaKnown RBP10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Prima1Q810F0 153 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 F930015N05RikQ8C3A3 210 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 TctaQ8VEA7 122 aa10.53□□□□□ -0.72
Usf1-208ENSMUST00000161241 Trav16d-dv11A0A075B617 117 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Gm6525A0A0A6YW33 106 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 H2al2bA9Z055 111 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Gm5294J3QP53 216 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Bsph2Q0Q236 131 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Khdc1aQ3UWR2 166 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Spata46Q4FZF2 204 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Hspe1Q64433 102 aaKnown RBP10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Vmn1r62Q8R2C0 300 aa10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 Mcrip2Q9CQB2 160 aaKnown RBP10.52□□□□□ -0.72
Usf1-208ENSMUST00000161241 1520401A03RikA0A0J9YVH6 598 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Hbb-bsA8DUK4 147 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm28038F7BCN9 126 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Esp3J3QN49 87 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Hbb-b1P02088 147 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gata3P23772 443 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ssbp4Q3U4B1 363 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ccsmst1Q6RUT7 136 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Aqp6Q8C4A0 293 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Itpr1P11881 2749 aa10.52□□□□□ -0.73
Usf1-208ENSMUST00000161241 Esp4A8R0T8 117 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm20481G3UXK4 153 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 AW146154Q3TPQ7 468 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm94Q3V2D2 93 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 Tal2Q62282 108 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 Slc16a4Q8R0M8 500 aa10.51□□□□□ -0.73
Usf1-208ENSMUST00000161241 BokO35425 213 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Svs5P30933 122 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm5941Q497P9 117 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 NpbQ8K4P1 119 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Chac1Q8R3J5 223 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 CntfrO88507 372 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Tmem95P0DJF3 176 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Tcl1b4P56844 120 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Foxc2Q61850 494 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Odf3Q920N1 254 aa10.5□□□□□ -0.73
Usf1-208ENSMUST00000161241 Defa34D3Z0J0 93 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Cd24P24807 76 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 RbpjP31266 526 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 NdpP48744 131 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm26938S4R185 226 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Sertad4A7DTG3 377 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm5878E9PUB3 99 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gm2174F6ZVF2 133 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 P01801 115 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 P06330 118 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Defa-rs7P50715 91 aa10.49□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ros1Q78DX7 2340 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Trav19A0A0B4J1K4 119 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 CrygbP04344 175 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 P06334 169 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Cdkn1aP39689 159 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Smr3aQ61900 147 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Rpl24Q8BP67 157 aaKnown RBP10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Dusp14Q9JLY7 198 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Zfhx4Q9JJN2 3550 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ighv1-31A0A0A6YWK5 117 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Trav7-5A0A0G2JFX6 112 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Cox8cA6H666 72 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Cited2O35740 269 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Pcp4P63054 62 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Olfr1209Q3SXJ3 310 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Klk15Q8CGR4 254 aa10.48□□□□□ -0.73
Usf1-208ENSMUST00000161241 Igkv4-90A0A075B5L3 117 aa10.47□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ighv1-4A0A075B5T4 117 aa10.47□□□□□ -0.73
Usf1-208ENSMUST00000161241 Ndufa1O35683 70 aa10.47□□□□□ -0.73
Usf1-208ENSMUST00000161241 Spock3Q8BKV0 436 aa10.47□□□□□ -0.73
Usf1-208ENSMUST00000161241 Gpx7Q99LJ6 186 aa10.47□□□□□ -0.73
Usf1-208ENSMUST00000161241 AcacaQ5SWU9 2345 aa10.46□□□□□ -0.73
Usf1-208ENSMUST00000161241 Odf3l1Q810P2 275 aa10.46□□□□□ -0.73
Usf1-208ENSMUST00000161241 RhohQ9D3G9 191 aa10.46□□□□□ -0.73
Usf1-208ENSMUST00000161241 SpenQ62504 3644 aaKnown RBP10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Ighv1-53A0A075B5W3 117 aa10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Gm12057A0A087WR21 115 aa10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Nsun4C4P6S0 806 aaKnown RBP10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Gosr1O88630 250 aa10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Cd52Q64389 74 aa10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 Rbfox3Q8BIF2 374 aa10.46□□□□□ -0.74
Usf1-208ENSMUST00000161241 5730596B20RikQ8BQ08 205 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms