RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Arl3Q9WUL7 182 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tet1Q3URK3 2007 aaKnown RBP9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Trav9d-1A0A075B699 112 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 2310009B15RikA0A0A6YWI4 143 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tmem238lA0A1B0GS74 79 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Saa3P04918 122 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Rpl11Q9CXW4 178 aaKnown RBP9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Lyg1Q9D7Q0 197 aa9.82□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Nat8b-psE0CYC6 232 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 March3Q8BRX9 218 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 QrfpQ8CE23 124 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tmem219Q9D123 240 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 VcanQ62059 3357 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm29644A0A087WPG2 191 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm11444F6QMA6 170 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Sh2d1bO35324 132 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm14137Q8CE97 175 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ammecr1Q9JHT5 344 aaKnown RBP9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ighv7-3A0A075B5R2 120 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm6525A0A0A6YW33 106 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 P01802 115 aa9.81□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 FrylF8VQ05 3007 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Dchs1E9PVD3 3291 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Igkv4-80A0A075B5L7 116 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Trav7-1A0A0G2JEV5 112 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 PlnP61014 52 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 AmelxP63277 210 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Samd10Q7TST3 202 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Crip1P63254 77 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tmem167aQ9CR64 72 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Klk5Q9D140 293 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Rab37Q9JKM7 223 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Hbb-bsA8DUK4 147 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Hbb-b1P02088 147 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 ElaneQ3UP87 265 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 NpbQ8K4P1 119 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cdip1Q9DB75 208 aa9.8□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Nav3Q80TN7 2359 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ighv5-12-4A0A0A6YWG4 117 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 NdpP48744 131 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Cfc1P97766 202 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Obox1Q9D350 204 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ighv2-6A0A075B6A7 116 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tnfaip6O08859 275 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 P18532 116 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 G430049J08RikQ3TL09 166 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Q9CX63 252 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ccl24Q9JKC0 119 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Tpsg1Q9QUL7 311 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Lrp4Q8VI56 1905 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Trav7-5A0A0G2JFX6 112 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm45717A0A1B0GT68 152 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Snrnp40Q6PE01 358 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gpr82Q8BZR0 328 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ifi27l2aQ8R412 90 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Ociad1Q9CRD0 247 aaKnown RBP9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 OtorQ9JIE3 128 aa9.79□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Itpr1P11881 2749 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Igkv14-130A0A0G2JF45 117 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Defa-rs2P17534 91 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 MdfiP70331 251 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 ApomQ9Z1R3 190 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 FlnbQ80X90 2602 aaKnown RBP9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Igkv5-37A0A140T8N4 115 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Znf385cA2A5E6 429 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Csn3P06796 181 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Trav3-4A0A075B654 114 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm10271F6WY25 52 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Srp14P16254 110 aaKnown RBP9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Rpl32P62911 135 aaKnown RBP9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm6040Q4QY32 63 aa9.78□□□□□ -0.84
Pcdh1-202ENSMUST00000159405 Gm28044L7N1X0 119 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ccl3P10855 92 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Pax8Q00288 457 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Hif1anQ8BLR9 349 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Eml6Q5SQM0 1958 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 PolqQ8CGS6 2544 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm19345G3UYD9 124 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 IappP12968 93 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Lrcol1Q3URS3 161 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Rnf182Q8C432 247 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Rasl10aQ8K5A4 203 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gtsf1lQ9CWD0 151 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Slc25a39Q9D8K8 359 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Tnrc18Q80WC3 2878 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Celsr1O35161 3034 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm15093A2BI72 449 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 B1ARW8 110 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Nxph4G3X9N5 304 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Gm15085Q62012 449 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Dlx1Q64317 255 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Zfp119aQ9JIC0 545 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Epg5Q80TA9 2572 aa9.77□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Lbhd2G3UW55 114 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Vsig8Q6P3A4 417 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Fam222aQ6PGH4 453 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Fbxl15Q91W61 300 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Ubtd1Q91WB7 227 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Tmem170bP86050 132 aa9.76□□□□□ -0.85
Pcdh1-202ENSMUST00000159405 Q9D131 166 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 92.8 ms