RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ITPR1Q14643 2758 aa5.24□□□□□ -1.57
CACNA1A-242ENST00000637485 FLNCQ14315 2725 aa5.23□□□□□ -1.57
CACNA1A-242ENST00000637485 UTP20O75691 2785 aaKnown RBP5.21□□□□□ -1.58
CACNA1A-242ENST00000637485 DNAH14Q0VDD8 3507 aa5.21□□□□□ -1.58
CACNA1A-242ENST00000637485 VCANP13611 3396 aa5.21□□□□□ -1.58
CACNA1A-242ENST00000637485 ATMQ13315 3056 aa5.2□□□□□ -1.58
CACNA1A-242ENST00000637485 KALRNO60229 2985 aa5.2□□□□□ -1.58
CACNA1A-242ENST00000637485 STAB2Q8WWQ8 2551 aa5.2□□□□□ -1.58
CACNA1A-242ENST00000637485 TNRC18O15417 2968 aaPredicted RBP5.19□□□□□ -1.58
CACNA1A-242ENST00000637485 LRBAP50851 2863 aa5.19□□□□□ -1.58
CACNA1A-242ENST00000637485 DMXL2Q8TDJ6 3036 aa5.18□□□□□ -1.58
CACNA1A-242ENST00000637485 ADGRG4Q8IZF6 3080 aa5.17□□□□□ -1.58
CACNA1A-242ENST00000637485 TACC2O95359 2948 aa5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 COL6A3P12111 3177 aa5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 HIVEP1P15822 2718 aa5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 COL12A1Q99715 3063 aa5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 APCP25054 2843 aa5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
CACNA1A-242ENST00000637485 REV3LO60673 3130 aa5.13□□□□□ -1.59
CACNA1A-242ENST00000637485 NBEAQ8NFP9 2946 aa5.13□□□□□ -1.59
CACNA1A-242ENST00000637485 FRYLO94915 3013 aa5.13□□□□□ -1.59
CACNA1A-242ENST00000637485 ASH1LQ9NR48 2969 aaKnown RBP5.12□□□□□ -1.59
CACNA1A-242ENST00000637485 EYSQ5T1H1 3165 aa5.12□□□□□ -1.59
CACNA1A-242ENST00000637485 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
CACNA1A-242ENST00000637485 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
CACNA1A-242ENST00000637485 HRNRQ86YZ3 2850 aaPredicted RBP5.09□□□□□ -1.6
CACNA1A-242ENST00000637485 CFAP47Q6ZTR5 3102 aa5.07□□□□□ -1.6
CACNA1A-242ENST00000637485 NIPBLQ6KC79 2804 aaeCLIP5.06□□□□□ -1.6
CACNA1A-242ENST00000637485 USP34Q70CQ2 3546 aa5.02□□□□□ -1.61
CACNA1A-242ENST00000637485 ZZEF1O43149 2961 aa5.02□□□□□ -1.61
CACNA1A-242ENST00000637485 DMXL1Q9Y485 3027 aa4.98□□□□□ -1.61
CACNA1A-242ENST00000637485 INE1O15225 51 aa4.98□□□□□ -1.61
CACNA1A-242ENST00000637485 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
CACNA1A-242ENST00000637485 XP32Q5T750 250 aa4.97□□□□□ -1.61
CACNA1A-242ENST00000637485 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
CACNA1A-242ENST00000637485 SPEGQ15772 3267 aa4.97□□□□□ -1.61
CACNA1A-242ENST00000637485 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
CACNA1A-242ENST00000637485 CELSR2Q9HCU4 2923 aa4.92□□□□□ -1.62
CACNA1A-242ENST00000637485 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
CACNA1A-242ENST00000637485 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
CACNA1A-242ENST00000637485 TENM4Q6N022 2769 aa4.91□□□□□ -1.62
CACNA1A-242ENST00000637485 KRTAP13-3Q3SY46 172 aa4.91□□□□□ -1.62
CACNA1A-242ENST00000637485 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
CACNA1A-242ENST00000637485 ZFHX3Q15911 3703 aa4.88□□□□□ -1.63
CACNA1A-242ENST00000637485 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
CACNA1A-242ENST00000637485 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
CACNA1A-242ENST00000637485 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
CACNA1A-242ENST00000637485 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
CACNA1A-242ENST00000637485 FBN2P35556 2912 aa4.83□□□□□ -1.64
CACNA1A-242ENST00000637485 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
CACNA1A-242ENST00000637485 MYO15AQ9UKN7 3530 aa4.79□□□□□ -1.64
CACNA1A-242ENST00000637485 NF1P21359 2839 aa4.78□□□□□ -1.64
CACNA1A-242ENST00000637485 MXRA5Q9NR99 2828 aa4.77□□□□□ -1.65
CACNA1A-242ENST00000637485 PDZD2O15018 2839 aa4.76□□□□□ -1.65
CACNA1A-242ENST00000637485 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
CACNA1A-242ENST00000637485 CELSR1Q9NYQ6 3014 aa4.72□□□□□ -1.65
CACNA1A-242ENST00000637485 TENM3Q9P273 2699 aa4.72□□□□□ -1.65
CACNA1A-242ENST00000637485 RELNP78509 3460 aa4.65□□□□□ -1.66
CACNA1A-242ENST00000637485 TENM2Q9NT68 2774 aa4.65□□□□□ -1.66
CACNA1A-242ENST00000637485 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.66
CACNA1A-242ENST00000637485 TENM1Q9UKZ4 2725 aa4.64□□□□□ -1.67
CACNA1A-242ENST00000637485 WDFY3Q8IZQ1 3526 aa4.64□□□□□ -1.67
CACNA1A-242ENST00000637485 TGP01266 2768 aa4.6□□□□□ -1.67
CACNA1A-242ENST00000637485 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
CACNA1A-242ENST00000637485 DCHS1Q96JQ0 3298 aa4.59□□□□□ -1.68
CACNA1A-242ENST00000637485 ASPMQ8IZT6 3477 aa4.58□□□□□ -1.68
CACNA1A-242ENST00000637485 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
CACNA1A-242ENST00000637485 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
CACNA1A-242ENST00000637485 PKD1L1Q8TDX9 2849 aa4.56□□□□□ -1.68
CACNA1A-242ENST00000637485 ZFHX4Q86UP3 3567 aa4.54□□□□□ -1.68
CACNA1A-242ENST00000637485 NBPF19A0A087WUL8 3843 aa4.53□□□□□ -1.68
CACNA1A-242ENST00000637485 LAMA5O15230 3695 aa4.52□□□□□ -1.69
CACNA1A-242ENST00000637485 VWFP04275 2813 aa4.51□□□□□ -1.69
CACNA1A-242ENST00000637485 DMDP11532 3685 aa4.48□□□□□ -1.69
CACNA1A-242ENST00000637485 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
CACNA1A-242ENST00000637485 CSMD1Q96PZ7 3565 aa4.45□□□□□ -1.7
CACNA1A-242ENST00000637485 SMG1Q96Q15 3661 aaKnown RBP4.45□□□□□ -1.7
CACNA1A-242ENST00000637485 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
CACNA1A-242ENST00000637485 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
CACNA1A-242ENST00000637485 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
CACNA1A-242ENST00000637485 FBN1P35555 2871 aaKnown RBP4.42□□□□□ -1.7
CACNA1A-242ENST00000637485 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
CACNA1A-242ENST00000637485 CUBNO60494 3623 aa4.39□□□□□ -1.71
CACNA1A-242ENST00000637485 BSNQ9UPA5 3926 aa4.39□□□□□ -1.71
CACNA1A-242ENST00000637485 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
CACNA1A-242ENST00000637485 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
CACNA1A-242ENST00000637485 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
CACNA1A-242ENST00000637485 MUC3AQ02505 3323 aa4.34□□□□□ -1.72
CACNA1A-242ENST00000637485 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
CACNA1A-242ENST00000637485 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
CACNA1A-242ENST00000637485 SVEP1Q4LDE5 3571 aa4.3□□□□□ -1.72
CACNA1A-242ENST00000637485 TRRAPQ9Y4A5 3859 aa4.3□□□□□ -1.72
CACNA1A-242ENST00000637485 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
CACNA1A-242ENST00000637485 MEGF8Q7Z7M0 2845 aa4.28□□□□□ -1.72
CACNA1A-242ENST00000637485 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CACNA1A-242ENST00000637485 CSMD2Q7Z408 3487 aa4.22□□□□□ -1.73
CACNA1A-242ENST00000637485 DNAH9Q9NYC9 4486 aa4.17□□□□□ -1.74
CACNA1A-242ENST00000637485 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
CACNA1A-242ENST00000637485 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
CACNA1A-242ENST00000637485 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms