RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
CACNA1A-242ENST00000637485 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-242ENST00000637485 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
CACNA1A-242ENST00000637485 MYT1Q01538 1121 aa16.03■□□□□ 0.16
CACNA1A-242ENST00000637485 SUPT5HO00267 1087 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-242ENST00000637485 ERICH6Q7L0X2 663 aa15.39■□□□□ 0.05
CACNA1A-242ENST00000637485 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-242ENST00000637485 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
CACNA1A-242ENST00000637485 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-242ENST00000637485 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-242ENST00000637485 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-242ENST00000637485 YTHDC1Q96MU7 727 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-242ENST00000637485 NEFLP07196 543 aa14.73□□□□□ -0.05
CACNA1A-242ENST00000637485 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
CACNA1A-242ENST00000637485 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
CACNA1A-242ENST00000637485 APLP2Q06481 763 aa14.59□□□□□ -0.07
CACNA1A-242ENST00000637485 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-242ENST00000637485 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
CACNA1A-242ENST00000637485 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
CACNA1A-242ENST00000637485 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-242ENST00000637485 HRCP23327 699 aa14.25□□□□□ -0.13
CACNA1A-242ENST00000637485 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-242ENST00000637485 GLIPR1L2Q4G1C9 344 aa14.07□□□□□ -0.16
CACNA1A-242ENST00000637485 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-242ENST00000637485 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-242ENST00000637485 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
CACNA1A-242ENST00000637485 ATP1B4Q9UN42 357 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-242ENST00000637485 CHIC1Q5VXU3 224 aa13.94□□□□□ -0.18
CACNA1A-242ENST00000637485 EIF5BO60841 1220 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-242ENST00000637485 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
CACNA1A-242ENST00000637485 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
CACNA1A-242ENST00000637485 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-242ENST00000637485 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-242ENST00000637485 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
CACNA1A-242ENST00000637485 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
CACNA1A-242ENST00000637485 PPARGC1BQ86YN6 1023 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-242ENST00000637485 ABCC9O60706 1549 aa13.74□□□□□ -0.21
CACNA1A-242ENST00000637485 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-242ENST00000637485 ANP32AP39687 249 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-242ENST00000637485 BCANQ96GW7 911 aa13.62□□□□□ -0.23
CACNA1A-242ENST00000637485 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-242ENST00000637485 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
CACNA1A-242ENST00000637485 ANP32BQ92688 251 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-242ENST00000637485 ITGAEP38570 1179 aa13.53□□□□□ -0.24
CACNA1A-242ENST00000637485 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-242ENST00000637485 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNA1A-242ENST00000637485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-242ENST00000637485 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
CACNA1A-242ENST00000637485 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-242ENST00000637485 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
CACNA1A-242ENST00000637485 ANP32CO43423 234 aa13.36□□□□□ -0.27
CACNA1A-242ENST00000637485 CNGB1Q14028 1251 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-242ENST00000637485 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-242ENST00000637485 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-242ENST00000637485 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
CACNA1A-242ENST00000637485 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-242ENST00000637485 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CACNA1A-242ENST00000637485 NBR1Q14596 966 aa13.28□□□□□ -0.28
CACNA1A-242ENST00000637485 BCL11AQ9H165 835 aa13.26□□□□□ -0.29
CACNA1A-242ENST00000637485 FKBP8Q14318 412 aa13.23□□□□□ -0.29
CACNA1A-242ENST00000637485 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
CACNA1A-242ENST00000637485 TRIM52Q96A61 297 aa13.21□□□□□ -0.3
CACNA1A-242ENST00000637485 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-242ENST00000637485 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-242ENST00000637485 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
CACNA1A-242ENST00000637485 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-242ENST00000637485 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-242ENST00000637485 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-242ENST00000637485 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-242ENST00000637485 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.31
CACNA1A-242ENST00000637485 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-242ENST00000637485 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
CACNA1A-242ENST00000637485 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-242ENST00000637485 NACADO15069 1562 aa13.09□□□□□ -0.31
CACNA1A-242ENST00000637485 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-242ENST00000637485 NEFMP07197 916 aa13.05□□□□□ -0.32
CACNA1A-242ENST00000637485 DDRGK1Q96HY6 314 aa13.04□□□□□ -0.32
CACNA1A-242ENST00000637485 ARXQ96QS3 562 aa13.04□□□□□ -0.32
CACNA1A-242ENST00000637485 FBLN2P98095 1184 aa13.04□□□□□ -0.32
CACNA1A-242ENST00000637485 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-242ENST00000637485 P3H3Q8IVL6 736 aa13.02□□□□□ -0.33
CACNA1A-242ENST00000637485 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
CACNA1A-242ENST00000637485 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
CACNA1A-242ENST00000637485 EEA1Q15075 1411 aa12.99□□□□□ -0.33
CACNA1A-242ENST00000637485 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-242ENST00000637485 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-242ENST00000637485 BECN1Q14457 450 aa12.94□□□□□ -0.34
CACNA1A-242ENST00000637485 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNA1A-242ENST00000637485 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
CACNA1A-242ENST00000637485 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-242ENST00000637485 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
CACNA1A-242ENST00000637485 CLIP1P30622 1438 aa12.89□□□□□ -0.35
CACNA1A-242ENST00000637485 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-242ENST00000637485 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
CACNA1A-242ENST00000637485 PTMAP06454 111 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-242ENST00000637485 ARID3CA6NKF2 412 aa12.86□□□□□ -0.35
CACNA1A-242ENST00000637485 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-242ENST00000637485 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-242ENST00000637485 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-242ENST00000637485 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms