RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 KRTAP10-3P60369 221 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP10-6P60371 365 aaPredicted RBP0.98□□□□□ -2.25
TCF4-264ENST00000628391 UBE2DNLQ8IWF7 75 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP3-1Q9BYR8 98 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP1-5Q9BYS1 174 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 RYR2Q92736 4967 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 ITPR1Q14643 2758 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 SPTA1P02549 2419 aa0.98□□□□□ -2.25
TCF4-264ENST00000628391 AKAP13Q12802 2813 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 AKAP9Q99996 3911 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 VPS13CQ709C8 3753 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 INE1O15225 51 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 RPS29P62273 56 aaKnown RBP0.97□□□□□ -2.25
TCF4-264ENST00000628391 PP632Q6XCG6 107 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 KRTAP1-3Q8IUG1 177 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 NF1P21359 2839 aa0.97□□□□□ -2.25
TCF4-264ENST00000628391 MAP1AP78559 2803 aaPredicted RBP0.97□□□□□ -2.25
TCF4-264ENST00000628391 CUBNO60494 3623 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 SPTAN1Q13813 2472 aaKnown RBP0.96□□□□□ -2.26
TCF4-264ENST00000628391 SPG11Q96JI7 2443 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 IGSF10Q6WRI0 2623 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 CELSR1Q9NYQ6 3014 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 SETD2Q9BYW2 2564 aaPredicted RBP0.96□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP1-1Q07627 177 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 FBN1P35555 2871 aaKnown RBP0.96□□□□□ -2.26
TCF4-264ENST00000628391 PDZD2O15018 2839 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 UTP20O75691 2785 aaKnown RBP0.96□□□□□ -2.26
TCF4-264ENST00000628391 NBEAL2Q6ZNJ1 2754 aa0.96□□□□□ -2.26
TCF4-264ENST00000628391 CRYBG3Q68DQ2 2970 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP13-2Q52LG2 175 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 R4GN34 69 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 KIAA1109Q2LD37 5005 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 NBEAL1Q6ZS30 2694 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 CEP295Q9C0D2 2601 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 CREBBPQ92793 2442 aa0.95□□□□□ -2.26
TCF4-264ENST00000628391 BSNQ9UPA5 3926 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 SPRR5A0A1B0GTR4 108 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP23-1A1A580 65 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 M0QZ58 72 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP3-3Q9BYR6 98 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 FLG2Q5D862 2391 aaPredicted RBP0.94□□□□□ -2.26
TCF4-264ENST00000628391 TLN1Q9Y490 2541 aaKnown RBP0.94□□□□□ -2.26
TCF4-264ENST00000628391 OTOGLQ3ZCN5 2332 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 CSPG4Q6UVK1 2322 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 DCHS2Q6V1P9 2916 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 ATMQ13315 3056 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 HERC2O95714 4834 aa0.94□□□□□ -2.26
TCF4-264ENST00000628391 ADGRG4Q8IZF6 3080 aa0.93□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP10-9P60411 292 aa0.93□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP10-11P60412 298 aa0.93□□□□□ -2.26
TCF4-264ENST00000628391 TLN2Q9Y4G6 2542 aa0.93□□□□□ -2.26
TCF4-264ENST00000628391 ZNF469Q96JG9 3925 aaPredicted RBP0.93□□□□□ -2.26
TCF4-264ENST00000628391 HIVEP2P31629 2446 aa0.93□□□□□ -2.26
TCF4-264ENST00000628391 F8P00451 2351 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 FLNAP21333 2647 aaKnown RBP0.92□□□□□ -2.26
TCF4-264ENST00000628391 HIVEP3Q5T1R4 2406 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP1-4P0C5Y4 121 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 OTOGQ6ZRI0 2925 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 ABCA13Q86UQ4 5058 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 LRBAP50851 2863 aa0.92□□□□□ -2.26
TCF4-264ENST00000628391 JMJD1CQ15652 2540 aa0.91□□□□□ -2.26
TCF4-264ENST00000628391 PRRC2CQ9Y520 2896 aaKnown RBP0.91□□□□□ -2.26
TCF4-264ENST00000628391 TACC2O95359 2948 aa0.91□□□□□ -2.26
TCF4-264ENST00000628391 HERC1Q15751 4861 aa0.91□□□□□ -2.26
TCF4-264ENST00000628391 KRTAP10-8P60410 259 aa0.91□□□□□ -2.26
TCF4-264ENST00000628391 SVEP1Q4LDE5 3571 aa0.91□□□□□ -2.26
TCF4-264ENST00000628391 PKD1L1Q8TDX9 2849 aa0.9□□□□□ -2.26
TCF4-264ENST00000628391 C9orf92A6NGG3 77 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 J3QKU1 62 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 Q5VSD8 79 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 DNAH1Q9P2D7 4330 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 LRRK2Q5S007 2527 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 ATRQ13535 2644 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 FLNCQ14315 2725 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 CCDC168Q8NDH2 2452 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 STAB1Q9NY15 2570 aa0.9□□□□□ -2.27
TCF4-264ENST00000628391 MTORP42345 2549 aa0.89□□□□□ -2.27
TCF4-264ENST00000628391 ITPR2Q14571 2701 aa0.89□□□□□ -2.27
TCF4-264ENST00000628391 SMR3AQ99954 134 aa0.89□□□□□ -2.27
TCF4-264ENST00000628391 APCP25054 2843 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 NIPBLQ6KC79 2804 aaeCLIP0.88□□□□□ -2.27
TCF4-264ENST00000628391 HIVEP1P15822 2718 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 TGP01266 2768 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 ANK3Q12955 4377 aaKnown RBP0.88□□□□□ -2.27
TCF4-264ENST00000628391 VPS13DQ5THJ4 4388 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 MUC2Q02817 5179 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
TCF4-264ENST00000628391 ANK2Q01484 3957 aa0.88□□□□□ -2.27
TCF4-264ENST00000628391 PRKDCP78527 4128 aaKnown RBP0.87□□□□□ -2.27
TCF4-264ENST00000628391 SACSQ9NZJ4 4579 aa0.87□□□□□ -2.27
TCF4-264ENST00000628391 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
TCF4-264ENST00000628391 CENPEQ02224 2701 aa0.87□□□□□ -2.27
TCF4-264ENST00000628391 SONP18583 2426 aaKnown RBP0.86□□□□□ -2.27
TCF4-264ENST00000628391 KRTAP21-3Q3LHN1 58 aa0.86□□□□□ -2.27
TCF4-264ENST00000628391 VWFP04275 2813 aa0.85□□□□□ -2.27
TCF4-264ENST00000628391 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
TCF4-264ENST00000628391 A0A1B0GVY2 172 aa0.85□□□□□ -2.27
TCF4-264ENST00000628391 TNP1P09430 55 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms