RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.8
COLCA1-205ENST00000620864 UTP20O75691 2785 aaKnown RBP3.83□□□□□ -1.8
COLCA1-205ENST00000620864 LAMA2P24043 3122 aaKnown RBP3.83□□□□□ -1.8
COLCA1-205ENST00000620864 CELSR3Q9NYQ7 3312 aa3.81□□□□□ -1.8
COLCA1-205ENST00000620864 NBEAL2Q6ZNJ1 2754 aa3.81□□□□□ -1.8
COLCA1-205ENST00000620864 FREM2Q5SZK8 3169 aa3.8□□□□□ -1.8
COLCA1-205ENST00000620864 TRIOO75962 3097 aa3.8□□□□□ -1.8
COLCA1-205ENST00000620864 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
COLCA1-205ENST00000620864 TENM4Q6N022 2769 aa3.78□□□□□ -1.8
COLCA1-205ENST00000620864 ITPR1Q14643 2758 aa3.76□□□□□ -1.81
COLCA1-205ENST00000620864 INE1O15225 51 aa3.75□□□□□ -1.81
COLCA1-205ENST00000620864 EYSQ5T1H1 3165 aa3.74□□□□□ -1.81
COLCA1-205ENST00000620864 SPTBN5Q9NRC6 3674 aaKnown RBP3.73□□□□□ -1.81
COLCA1-205ENST00000620864 APCP25054 2843 aa3.73□□□□□ -1.81
COLCA1-205ENST00000620864 VCANP13611 3396 aa3.73□□□□□ -1.81
COLCA1-205ENST00000620864 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
COLCA1-205ENST00000620864 VPS13AQ96RL7 3174 aa3.71□□□□□ -1.81
COLCA1-205ENST00000620864 XP32Q5T750 250 aa3.7□□□□□ -1.82
COLCA1-205ENST00000620864 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
COLCA1-205ENST00000620864 LRBAP50851 2863 aa3.69□□□□□ -1.82
COLCA1-205ENST00000620864 SPEGQ15772 3267 aa3.69□□□□□ -1.82
COLCA1-205ENST00000620864 DMXL2Q8TDJ6 3036 aa3.69□□□□□ -1.82
COLCA1-205ENST00000620864 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
COLCA1-205ENST00000620864 DNAH14Q0VDD8 3507 aa3.68□□□□□ -1.82
COLCA1-205ENST00000620864 USP34Q70CQ2 3546 aa3.68□□□□□ -1.82
COLCA1-205ENST00000620864 FRYLO94915 3013 aa3.68□□□□□ -1.82
COLCA1-205ENST00000620864 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
COLCA1-205ENST00000620864 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
COLCA1-205ENST00000620864 COL12A1Q99715 3063 aa3.67□□□□□ -1.82
COLCA1-205ENST00000620864 TENM3Q9P273 2699 aa3.65□□□□□ -1.83
COLCA1-205ENST00000620864 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
COLCA1-205ENST00000620864 LAMA1P25391 3075 aa3.63□□□□□ -1.83
COLCA1-205ENST00000620864 ATMQ13315 3056 aa3.63□□□□□ -1.83
COLCA1-205ENST00000620864 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
COLCA1-205ENST00000620864 TACC2O95359 2948 aa3.63□□□□□ -1.83
COLCA1-205ENST00000620864 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
COLCA1-205ENST00000620864 NBPF19A0A087WUL8 3843 aa3.61□□□□□ -1.83
COLCA1-205ENST00000620864 KALRNO60229 2985 aa3.61□□□□□ -1.83
COLCA1-205ENST00000620864 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
COLCA1-205ENST00000620864 BOD1L1Q8NFC6 3051 aa3.59□□□□□ -1.84
COLCA1-205ENST00000620864 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
COLCA1-205ENST00000620864 ASH1LQ9NR48 2969 aaKnown RBP3.58□□□□□ -1.84
COLCA1-205ENST00000620864 NBEAQ8NFP9 2946 aa3.57□□□□□ -1.84
COLCA1-205ENST00000620864 NF1P21359 2839 aa3.57□□□□□ -1.84
COLCA1-205ENST00000620864 TENM2Q9NT68 2774 aa3.54□□□□□ -1.84
COLCA1-205ENST00000620864 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
COLCA1-205ENST00000620864 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
COLCA1-205ENST00000620864 CELSR2Q9HCU4 2923 aa3.51□□□□□ -1.85
COLCA1-205ENST00000620864 PKD1L1Q8TDX9 2849 aa3.51□□□□□ -1.85
COLCA1-205ENST00000620864 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
COLCA1-205ENST00000620864 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
COLCA1-205ENST00000620864 PDZD2O15018 2839 aa3.49□□□□□ -1.85
COLCA1-205ENST00000620864 MYO15AQ9UKN7 3530 aa3.49□□□□□ -1.85
COLCA1-205ENST00000620864 ADGRG4Q8IZF6 3080 aa3.47□□□□□ -1.85
COLCA1-205ENST00000620864 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
COLCA1-205ENST00000620864 ASPMQ8IZT6 3477 aa3.47□□□□□ -1.85
COLCA1-205ENST00000620864 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
COLCA1-205ENST00000620864 ZZEF1O43149 2961 aa3.45□□□□□ -1.86
COLCA1-205ENST00000620864 VWFP04275 2813 aa3.44□□□□□ -1.86
COLCA1-205ENST00000620864 DCHS2Q6V1P9 2916 aa3.44□□□□□ -1.86
COLCA1-205ENST00000620864 TGP01266 2768 aa3.43□□□□□ -1.86
COLCA1-205ENST00000620864 NIPBLQ6KC79 2804 aaeCLIP3.42□□□□□ -1.86
COLCA1-205ENST00000620864 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
COLCA1-205ENST00000620864 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
COLCA1-205ENST00000620864 LOC400499M0QZD8 3231 aa3.41□□□□□ -1.86
COLCA1-205ENST00000620864 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
COLCA1-205ENST00000620864 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
COLCA1-205ENST00000620864 RELNP78509 3460 aa3.38□□□□□ -1.87
COLCA1-205ENST00000620864 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
COLCA1-205ENST00000620864 ANK3Q12955 4377 aaKnown RBP3.37□□□□□ -1.87
COLCA1-205ENST00000620864 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
COLCA1-205ENST00000620864 WDFY3Q8IZQ1 3526 aa3.36□□□□□ -1.87
COLCA1-205ENST00000620864 CELSR1Q9NYQ6 3014 aa3.34□□□□□ -1.87
COLCA1-205ENST00000620864 FBN3Q75N90 2809 aa3.33□□□□□ -1.88
COLCA1-205ENST00000620864 DCHS1Q96JQ0 3298 aa3.33□□□□□ -1.88
COLCA1-205ENST00000620864 FBN2P35556 2912 aa3.33□□□□□ -1.88
COLCA1-205ENST00000620864 AKAP9Q99996 3911 aa3.31□□□□□ -1.88
COLCA1-205ENST00000620864 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
COLCA1-205ENST00000620864 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
COLCA1-205ENST00000620864 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
COLCA1-205ENST00000620864 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
COLCA1-205ENST00000620864 SPRR2EP22531 72 aa3.3□□□□□ -1.88
COLCA1-205ENST00000620864 SPRR2BP35325 72 aa3.3□□□□□ -1.88
COLCA1-205ENST00000620864 SPRR2AP35326 72 aa3.3□□□□□ -1.88
COLCA1-205ENST00000620864 HRNRQ86YZ3 2850 aaPredicted RBP3.3□□□□□ -1.88
COLCA1-205ENST00000620864 LAMA5O15230 3695 aa3.28□□□□□ -1.88
COLCA1-205ENST00000620864 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
COLCA1-205ENST00000620864 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
COLCA1-205ENST00000620864 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
COLCA1-205ENST00000620864 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
COLCA1-205ENST00000620864 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
COLCA1-205ENST00000620864 MXRA5Q9NR99 2828 aa3.24□□□□□ -1.89
COLCA1-205ENST00000620864 DMDP11532 3685 aa3.23□□□□□ -1.89
COLCA1-205ENST00000620864 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
COLCA1-205ENST00000620864 SPENQ96T58 3664 aaKnown RBP3.22□□□□□ -1.89
COLCA1-205ENST00000620864 OTOGQ6ZRI0 2925 aa3.22□□□□□ -1.89
COLCA1-205ENST00000620864 SPRR2DP22532 72 aa3.22□□□□□ -1.89
COLCA1-205ENST00000620864 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
COLCA1-205ENST00000620864 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
COLCA1-205ENST00000620864 RYR1P21817 5038 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms