RNA–Protein interactions for RNA: ENST00000611820.4

KDM6A-213, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,924 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-213ENST00000611820 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
KDM6A-213ENST00000611820 APCP25054 2843 aa8.65□□□□□ -1.02
KDM6A-213ENST00000611820 VPS13AQ96RL7 3174 aa8.65□□□□□ -1.02
KDM6A-213ENST00000611820 UBR5O95071 2799 aaPredicted RBP8.65□□□□□ -1.03
KDM6A-213ENST00000611820 ITPR2Q14571 2701 aa8.63□□□□□ -1.03
KDM6A-213ENST00000611820 LAMA1P25391 3075 aa8.62□□□□□ -1.03
KDM6A-213ENST00000611820 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
KDM6A-213ENST00000611820 KALRNO60229 2985 aa8.57□□□□□ -1.04
KDM6A-213ENST00000611820 SPTBN5Q9NRC6 3674 aaKnown RBP8.55□□□□□ -1.04
KDM6A-213ENST00000611820 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
KDM6A-213ENST00000611820 COL6A3P12111 3177 aa8.53□□□□□ -1.04
KDM6A-213ENST00000611820 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
KDM6A-213ENST00000611820 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
KDM6A-213ENST00000611820 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
KDM6A-213ENST00000611820 KMT2BQ9UMN6 2715 aaPredicted RBP8.47□□□□□ -1.05
KDM6A-213ENST00000611820 HIVEP1P15822 2718 aa8.47□□□□□ -1.05
KDM6A-213ENST00000611820 DSPP15924 2871 aaKnown RBP8.47□□□□□ -1.05
KDM6A-213ENST00000611820 UTP20O75691 2785 aaKnown RBP8.45□□□□□ -1.06
KDM6A-213ENST00000611820 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
KDM6A-213ENST00000611820 SPEGQ15772 3267 aa8.42□□□□□ -1.06
KDM6A-213ENST00000611820 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
KDM6A-213ENST00000611820 DMXL2Q8TDJ6 3036 aa8.35□□□□□ -1.07
KDM6A-213ENST00000611820 EYSQ5T1H1 3165 aa8.34□□□□□ -1.07
KDM6A-213ENST00000611820 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.08
KDM6A-213ENST00000611820 FRYLO94915 3013 aa8.34□□□□□ -1.08
KDM6A-213ENST00000611820 CRYBG3Q68DQ2 2970 aa8.33□□□□□ -1.08
KDM6A-213ENST00000611820 TACC2O95359 2948 aa8.32□□□□□ -1.08
KDM6A-213ENST00000611820 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
KDM6A-213ENST00000611820 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
KDM6A-213ENST00000611820 LRBAP50851 2863 aa8.31□□□□□ -1.08
KDM6A-213ENST00000611820 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
KDM6A-213ENST00000611820 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
KDM6A-213ENST00000611820 ATMQ13315 3056 aa8.21□□□□□ -1.1
KDM6A-213ENST00000611820 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
KDM6A-213ENST00000611820 ADGRG4Q8IZF6 3080 aa8.19□□□□□ -1.1
KDM6A-213ENST00000611820 KRTAP3-1Q9BYR8 98 aa8.19□□□□□ -1.1
KDM6A-213ENST00000611820 REV3LO60673 3130 aa8.19□□□□□ -1.1
KDM6A-213ENST00000611820 TGP01266 2768 aa8.13□□□□□ -1.11
KDM6A-213ENST00000611820 NIPBLQ6KC79 2804 aaeCLIP8.12□□□□□ -1.11
KDM6A-213ENST00000611820 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
KDM6A-213ENST00000611820 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
KDM6A-213ENST00000611820 TENM4Q6N022 2769 aa8.09□□□□□ -1.11
KDM6A-213ENST00000611820 CELSR2Q9HCU4 2923 aa8.08□□□□□ -1.12
KDM6A-213ENST00000611820 FLNCQ14315 2725 aa8.02□□□□□ -1.13
KDM6A-213ENST00000611820 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
KDM6A-213ENST00000611820 ZZEF1O43149 2961 aa8□□□□□ -1.13
KDM6A-213ENST00000611820 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
KDM6A-213ENST00000611820 LOC400499M0QZD8 3231 aa7.98□□□□□ -1.13
KDM6A-213ENST00000611820 WDFY3Q8IZQ1 3526 aa7.98□□□□□ -1.13
KDM6A-213ENST00000611820 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
KDM6A-213ENST00000611820 INE1O15225 51 aa7.96□□□□□ -1.14
KDM6A-213ENST00000611820 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
KDM6A-213ENST00000611820 TENM2Q9NT68 2774 aa7.9□□□□□ -1.15
KDM6A-213ENST00000611820 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
KDM6A-213ENST00000611820 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
KDM6A-213ENST00000611820 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
KDM6A-213ENST00000611820 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
KDM6A-213ENST00000611820 HRNRQ86YZ3 2850 aaPredicted RBP7.81□□□□□ -1.16
KDM6A-213ENST00000611820 KRTAP10-12P60413 245 aa7.76□□□□□ -1.17
KDM6A-213ENST00000611820 NF1P21359 2839 aa7.76□□□□□ -1.17
KDM6A-213ENST00000611820 RELNP78509 3460 aa7.75□□□□□ -1.17
KDM6A-213ENST00000611820 DCHS1Q96JQ0 3298 aa7.72□□□□□ -1.17
KDM6A-213ENST00000611820 CELSR1Q9NYQ6 3014 aa7.7□□□□□ -1.18
KDM6A-213ENST00000611820 DMDP11532 3685 aa7.69□□□□□ -1.18
KDM6A-213ENST00000611820 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
KDM6A-213ENST00000611820 LAMA5O15230 3695 aa7.68□□□□□ -1.18
KDM6A-213ENST00000611820 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
KDM6A-213ENST00000611820 FBN2P35556 2912 aa7.65□□□□□ -1.18
KDM6A-213ENST00000611820 CSMD1Q96PZ7 3565 aa7.63□□□□□ -1.19
KDM6A-213ENST00000611820 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
KDM6A-213ENST00000611820 PDZD2O15018 2839 aa7.57□□□□□ -1.2
KDM6A-213ENST00000611820 KRTAP12-3P60328 96 aa7.55□□□□□ -1.2
KDM6A-213ENST00000611820 SMG1Q96Q15 3661 aaKnown RBP7.55□□□□□ -1.2
KDM6A-213ENST00000611820 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
KDM6A-213ENST00000611820 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
KDM6A-213ENST00000611820 NBPF19A0A087WUL8 3843 aa7.44□□□□□ -1.22
KDM6A-213ENST00000611820 VWFP04275 2813 aa7.42□□□□□ -1.22
KDM6A-213ENST00000611820 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
KDM6A-213ENST00000611820 MXRA5Q9NR99 2828 aa7.4□□□□□ -1.23
KDM6A-213ENST00000611820 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
KDM6A-213ENST00000611820 MUC3AQ02505 3323 aa7.35□□□□□ -1.23
KDM6A-213ENST00000611820 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
KDM6A-213ENST00000611820 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
KDM6A-213ENST00000611820 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
KDM6A-213ENST00000611820 SPENQ96T58 3664 aaKnown RBP7.22□□□□□ -1.25
KDM6A-213ENST00000611820 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
KDM6A-213ENST00000611820 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.26
KDM6A-213ENST00000611820 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.26
KDM6A-213ENST00000611820 BSNQ9UPA5 3926 aa7.13□□□□□ -1.27
KDM6A-213ENST00000611820 CUBNO60494 3623 aa7.11□□□□□ -1.27
KDM6A-213ENST00000611820 FBN3Q75N90 2809 aa7.11□□□□□ -1.27
KDM6A-213ENST00000611820 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
KDM6A-213ENST00000611820 CSMD2Q7Z408 3487 aa7.1□□□□□ -1.27
KDM6A-213ENST00000611820 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
KDM6A-213ENST00000611820 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
KDM6A-213ENST00000611820 SRRM2Q9UQ35 2752 aaKnown RBP6.98□□□□□ -1.29
KDM6A-213ENST00000611820 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
KDM6A-213ENST00000611820 OTOGQ6ZRI0 2925 aa6.92□□□□□ -1.3
KDM6A-213ENST00000611820 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
KDM6A-213ENST00000611820 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms