RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 ADGRG4Q8IZF6 3080 aa8.95□□□□□ -0.98
TSC2-222ENST00000568454 H0YAA0 97 aa8.94□□□□□ -0.98
TSC2-222ENST00000568454 KMT2BQ9UMN6 2715 aaPredicted RBP8.91□□□□□ -0.98
TSC2-222ENST00000568454 P0C880 135 aa8.9□□□□□ -0.98
TSC2-222ENST00000568454 COL12A1Q99715 3063 aa8.9□□□□□ -0.99
TSC2-222ENST00000568454 LRBAP50851 2863 aa8.89□□□□□ -0.99
TSC2-222ENST00000568454 DNAH14Q0VDD8 3507 aa8.89□□□□□ -0.99
TSC2-222ENST00000568454 FRYLO94915 3013 aa8.86□□□□□ -0.99
TSC2-222ENST00000568454 TACC2O95359 2948 aa8.86□□□□□ -0.99
TSC2-222ENST00000568454 UTP20O75691 2785 aaKnown RBP8.86□□□□□ -0.99
TSC2-222ENST00000568454 FREM2Q5SZK8 3169 aa8.85□□□□□ -0.99
TSC2-222ENST00000568454 BOD1L1Q8NFC6 3051 aa8.85□□□□□ -0.99
TSC2-222ENST00000568454 DMXL2Q8TDJ6 3036 aa8.82□□□□□ -1
TSC2-222ENST00000568454 APCP25054 2843 aa8.77□□□□□ -1.01
TSC2-222ENST00000568454 COL6A3P12111 3177 aa8.77□□□□□ -1.01
TSC2-222ENST00000568454 HIVEP1P15822 2718 aa8.77□□□□□ -1.01
TSC2-222ENST00000568454 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
TSC2-222ENST00000568454 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
TSC2-222ENST00000568454 XP32Q5T750 250 aa8.71□□□□□ -1.01
TSC2-222ENST00000568454 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
TSC2-222ENST00000568454 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
TSC2-222ENST00000568454 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
TSC2-222ENST00000568454 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
TSC2-222ENST00000568454 REV3LO60673 3130 aa8.65□□□□□ -1.02
TSC2-222ENST00000568454 KRTAP21-3Q3LHN1 58 aa8.63□□□□□ -1.03
TSC2-222ENST00000568454 SPTBN5Q9NRC6 3674 aaKnown RBP8.61□□□□□ -1.03
TSC2-222ENST00000568454 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
TSC2-222ENST00000568454 HRNRQ86YZ3 2850 aaPredicted RBP8.6□□□□□ -1.03
TSC2-222ENST00000568454 TNRC18O15417 2968 aaPredicted RBP8.6□□□□□ -1.03
TSC2-222ENST00000568454 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
TSC2-222ENST00000568454 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
TSC2-222ENST00000568454 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
TSC2-222ENST00000568454 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
TSC2-222ENST00000568454 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
TSC2-222ENST00000568454 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
TSC2-222ENST00000568454 DMXL1Q9Y485 3027 aa8.49□□□□□ -1.05
TSC2-222ENST00000568454 USP34Q70CQ2 3546 aa8.48□□□□□ -1.05
TSC2-222ENST00000568454 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
TSC2-222ENST00000568454 SPEGQ15772 3267 aa8.4□□□□□ -1.06
TSC2-222ENST00000568454 LOC400499M0QZD8 3231 aa8.37□□□□□ -1.07
TSC2-222ENST00000568454 FBN2P35556 2912 aa8.37□□□□□ -1.07
TSC2-222ENST00000568454 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
TSC2-222ENST00000568454 NF1P21359 2839 aa8.34□□□□□ -1.07
TSC2-222ENST00000568454 PRO2289Q9P1D8 64 aa8.33□□□□□ -1.08
TSC2-222ENST00000568454 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
TSC2-222ENST00000568454 MYO15AQ9UKN7 3530 aa8.29□□□□□ -1.08
TSC2-222ENST00000568454 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
TSC2-222ENST00000568454 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
TSC2-222ENST00000568454 TGP01266 2768 aa8.23□□□□□ -1.09
TSC2-222ENST00000568454 MXRA5Q9NR99 2828 aa8.22□□□□□ -1.09
TSC2-222ENST00000568454 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
TSC2-222ENST00000568454 TENM3Q9P273 2699 aa8.13□□□□□ -1.11
TSC2-222ENST00000568454 CELSR1Q9NYQ6 3014 aa8.12□□□□□ -1.11
TSC2-222ENST00000568454 DMDP11532 3685 aa8.07□□□□□ -1.12
TSC2-222ENST00000568454 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
TSC2-222ENST00000568454 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
TSC2-222ENST00000568454 TENM1Q9UKZ4 2725 aa8.04□□□□□ -1.12
TSC2-222ENST00000568454 WDFY3Q8IZQ1 3526 aa8.03□□□□□ -1.12
TSC2-222ENST00000568454 RELNP78509 3460 aa7.97□□□□□ -1.13
TSC2-222ENST00000568454 TENM2Q9NT68 2774 aa7.96□□□□□ -1.13
TSC2-222ENST00000568454 PDZD2O15018 2839 aa7.96□□□□□ -1.14
TSC2-222ENST00000568454 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
TSC2-222ENST00000568454 DCHS1Q96JQ0 3298 aa7.84□□□□□ -1.15
TSC2-222ENST00000568454 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
TSC2-222ENST00000568454 INE1O15225 51 aa7.79□□□□□ -1.16
TSC2-222ENST00000568454 ASPMQ8IZT6 3477 aa7.75□□□□□ -1.17
TSC2-222ENST00000568454 ZFHX4Q86UP3 3567 aa7.74□□□□□ -1.17
TSC2-222ENST00000568454 PKD1L1Q8TDX9 2849 aa7.73□□□□□ -1.17
TSC2-222ENST00000568454 LAMA5O15230 3695 aa7.72□□□□□ -1.17
TSC2-222ENST00000568454 OTOGQ6ZRI0 2925 aa7.71□□□□□ -1.18
TSC2-222ENST00000568454 VWFP04275 2813 aa7.68□□□□□ -1.18
TSC2-222ENST00000568454 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
TSC2-222ENST00000568454 CSMD1Q96PZ7 3565 aa7.6□□□□□ -1.19
TSC2-222ENST00000568454 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
TSC2-222ENST00000568454 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
TSC2-222ENST00000568454 NBPF19A0A087WUL8 3843 aa7.57□□□□□ -1.2
TSC2-222ENST00000568454 SMG1Q96Q15 3661 aaKnown RBP7.55□□□□□ -1.2
TSC2-222ENST00000568454 SPENQ96T58 3664 aaKnown RBP7.54□□□□□ -1.2
TSC2-222ENST00000568454 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
TSC2-222ENST00000568454 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
TSC2-222ENST00000568454 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
TSC2-222ENST00000568454 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
TSC2-222ENST00000568454 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
TSC2-222ENST00000568454 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
TSC2-222ENST00000568454 SVEP1Q4LDE5 3571 aa7.34□□□□□ -1.23
TSC2-222ENST00000568454 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
TSC2-222ENST00000568454 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
TSC2-222ENST00000568454 TRRAPQ9Y4A5 3859 aa7.27□□□□□ -1.25
TSC2-222ENST00000568454 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
TSC2-222ENST00000568454 CSMD2Q7Z408 3487 aa7.23□□□□□ -1.25
TSC2-222ENST00000568454 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
TSC2-222ENST00000568454 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
TSC2-222ENST00000568454 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
TSC2-222ENST00000568454 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
TSC2-222ENST00000568454 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
TSC2-222ENST00000568454 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
TSC2-222ENST00000568454 CUBNO60494 3623 aa7.07□□□□□ -1.28
TSC2-222ENST00000568454 VPS13CQ709C8 3753 aa7□□□□□ -1.29
TSC2-222ENST00000568454 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.29
TSC2-222ENST00000568454 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms