RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
TUBGCP4-208ENST00000564079 KMT2BQ9UMN6 2715 aaPredicted RBP6.64□□□□□ -1.35
TUBGCP4-208ENST00000564079 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
TUBGCP4-208ENST00000564079 DMXL1Q9Y485 3027 aa6.62□□□□□ -1.35
TUBGCP4-208ENST00000564079 TACC2O95359 2948 aa6.62□□□□□ -1.35
TUBGCP4-208ENST00000564079 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
TUBGCP4-208ENST00000564079 TNP1P09430 55 aa6.62□□□□□ -1.35
TUBGCP4-208ENST00000564079 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
TUBGCP4-208ENST00000564079 ITPR1Q14643 2758 aa6.59□□□□□ -1.35
TUBGCP4-208ENST00000564079 ATMQ13315 3056 aa6.58□□□□□ -1.36
TUBGCP4-208ENST00000564079 XP32Q5T750 250 aa6.58□□□□□ -1.36
TUBGCP4-208ENST00000564079 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
TUBGCP4-208ENST00000564079 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
TUBGCP4-208ENST00000564079 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
TUBGCP4-208ENST00000564079 UTP20O75691 2785 aaKnown RBP6.53□□□□□ -1.36
TUBGCP4-208ENST00000564079 CFAP47Q6ZTR5 3102 aa6.52□□□□□ -1.37
TUBGCP4-208ENST00000564079 FLNCQ14315 2725 aa6.52□□□□□ -1.37
TUBGCP4-208ENST00000564079 ADGRG4Q8IZF6 3080 aa6.51□□□□□ -1.37
TUBGCP4-208ENST00000564079 Q5XG85 94 aa6.51□□□□□ -1.37
TUBGCP4-208ENST00000564079 LRBAP50851 2863 aa6.5□□□□□ -1.37
TUBGCP4-208ENST00000564079 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
TUBGCP4-208ENST00000564079 LOC400499M0QZD8 3231 aa6.48□□□□□ -1.37
TUBGCP4-208ENST00000564079 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
TUBGCP4-208ENST00000564079 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
TUBGCP4-208ENST00000564079 KALRNO60229 2985 aa6.44□□□□□ -1.38
TUBGCP4-208ENST00000564079 DMDP11532 3685 aa6.43□□□□□ -1.38
TUBGCP4-208ENST00000564079 APCP25054 2843 aa6.42□□□□□ -1.38
TUBGCP4-208ENST00000564079 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
TUBGCP4-208ENST00000564079 NBEAQ8NFP9 2946 aa6.38□□□□□ -1.39
TUBGCP4-208ENST00000564079 ASH1LQ9NR48 2969 aaKnown RBP6.37□□□□□ -1.39
TUBGCP4-208ENST00000564079 WDFY3Q8IZQ1 3526 aa6.37□□□□□ -1.39
TUBGCP4-208ENST00000564079 ZZEF1O43149 2961 aa6.36□□□□□ -1.39
TUBGCP4-208ENST00000564079 MUC3AQ02505 3323 aa6.35□□□□□ -1.39
TUBGCP4-208ENST00000564079 LAMA5O15230 3695 aa6.33□□□□□ -1.4
TUBGCP4-208ENST00000564079 ASPMQ8IZT6 3477 aa6.32□□□□□ -1.4
TUBGCP4-208ENST00000564079 H3BS24 57 aa6.31□□□□□ -1.4
TUBGCP4-208ENST00000564079 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
TUBGCP4-208ENST00000564079 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
TUBGCP4-208ENST00000564079 RELNP78509 3460 aa6.29□□□□□ -1.4
TUBGCP4-208ENST00000564079 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
TUBGCP4-208ENST00000564079 CELSR2Q9HCU4 2923 aa6.27□□□□□ -1.41
TUBGCP4-208ENST00000564079 TENM1Q9UKZ4 2725 aa6.26□□□□□ -1.41
TUBGCP4-208ENST00000564079 ZFHX4Q86UP3 3567 aa6.22□□□□□ -1.41
TUBGCP4-208ENST00000564079 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
TUBGCP4-208ENST00000564079 DCHS2Q6V1P9 2916 aa6.2□□□□□ -1.42
TUBGCP4-208ENST00000564079 DCHS1Q96JQ0 3298 aa6.2□□□□□ -1.42
TUBGCP4-208ENST00000564079 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
TUBGCP4-208ENST00000564079 ZANQ9Y493 2812 aa6.14□□□□□ -1.43
TUBGCP4-208ENST00000564079 P0C880 135 aa6.12□□□□□ -1.43
TUBGCP4-208ENST00000564079 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
TUBGCP4-208ENST00000564079 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
TUBGCP4-208ENST00000564079 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
TUBGCP4-208ENST00000564079 NF1P21359 2839 aa6.1□□□□□ -1.43
TUBGCP4-208ENST00000564079 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
TUBGCP4-208ENST00000564079 NIPBLQ6KC79 2804 aaeCLIP6.09□□□□□ -1.44
TUBGCP4-208ENST00000564079 PKD1L1Q8TDX9 2849 aa6.07□□□□□ -1.44
TUBGCP4-208ENST00000564079 FBN2P35556 2912 aa6.02□□□□□ -1.45
TUBGCP4-208ENST00000564079 A6NN06 94 aa6.02□□□□□ -1.45
TUBGCP4-208ENST00000564079 SMG1Q96Q15 3661 aaKnown RBP6.01□□□□□ -1.45
TUBGCP4-208ENST00000564079 CELSR1Q9NYQ6 3014 aa6□□□□□ -1.45
TUBGCP4-208ENST00000564079 VWFP04275 2813 aa5.98□□□□□ -1.45
TUBGCP4-208ENST00000564079 H0YAA0 97 aa5.97□□□□□ -1.45
TUBGCP4-208ENST00000564079 CSMD1Q96PZ7 3565 aa5.93□□□□□ -1.46
TUBGCP4-208ENST00000564079 SPENQ96T58 3664 aaKnown RBP5.92□□□□□ -1.46
TUBGCP4-208ENST00000564079 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
TUBGCP4-208ENST00000564079 PDZD2O15018 2839 aa5.87□□□□□ -1.47
TUBGCP4-208ENST00000564079 SVEP1Q4LDE5 3571 aa5.86□□□□□ -1.47
TUBGCP4-208ENST00000564079 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
TUBGCP4-208ENST00000564079 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
TUBGCP4-208ENST00000564079 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
TUBGCP4-208ENST00000564079 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
TUBGCP4-208ENST00000564079 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
TUBGCP4-208ENST00000564079 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
TUBGCP4-208ENST00000564079 CSMD2Q7Z408 3487 aa5.78□□□□□ -1.48
TUBGCP4-208ENST00000564079 TGP01266 2768 aa5.77□□□□□ -1.49
TUBGCP4-208ENST00000564079 OTOGQ6ZRI0 2925 aa5.75□□□□□ -1.49
TUBGCP4-208ENST00000564079 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
TUBGCP4-208ENST00000564079 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
TUBGCP4-208ENST00000564079 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
TUBGCP4-208ENST00000564079 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
TUBGCP4-208ENST00000564079 FBN1P35555 2871 aaKnown RBP5.61□□□□□ -1.51
TUBGCP4-208ENST00000564079 KRTAP12-1P59990 96 aa5.59□□□□□ -1.52
TUBGCP4-208ENST00000564079 FBN3Q75N90 2809 aa5.59□□□□□ -1.52
TUBGCP4-208ENST00000564079 CUBNO60494 3623 aa5.58□□□□□ -1.52
TUBGCP4-208ENST00000564079 VPS13CQ709C8 3753 aa5.57□□□□□ -1.52
TUBGCP4-208ENST00000564079 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
TUBGCP4-208ENST00000564079 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
TUBGCP4-208ENST00000564079 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
TUBGCP4-208ENST00000564079 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
TUBGCP4-208ENST00000564079 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
TUBGCP4-208ENST00000564079 ZNF469Q96JG9 3925 aaPredicted RBP5.44□□□□□ -1.54
TUBGCP4-208ENST00000564079 COL7A1Q02388 2944 aa5.36□□□□□ -1.55
TUBGCP4-208ENST00000564079 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
TUBGCP4-208ENST00000564079 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
TUBGCP4-208ENST00000564079 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
TUBGCP4-208ENST00000564079 MEGF8Q7Z7M0 2845 aa5.31□□□□□ -1.56
TUBGCP4-208ENST00000564079 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
TUBGCP4-208ENST00000564079 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
TUBGCP4-208ENST00000564079 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
TUBGCP4-208ENST00000564079 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms