RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 XP32Q5T750 250 aa6.05□□□□□ -1.44
RPAP1-204ENST00000562303 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
RPAP1-204ENST00000562303 UBR5O95071 2799 aaPredicted RBP6.03□□□□□ -1.44
RPAP1-204ENST00000562303 PP632Q6XCG6 107 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 ITPR2Q14571 2701 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 MYO15AQ9UKN7 3530 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 KRTAP10-10P60014 251 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 BOD1L1Q8NFC6 3051 aa5.99□□□□□ -1.45
RPAP1-204ENST00000562303 COL6A3P12111 3177 aa5.99□□□□□ -1.45
RPAP1-204ENST00000562303 DMXL2Q8TDJ6 3036 aa5.98□□□□□ -1.45
RPAP1-204ENST00000562303 FRYLO94915 3013 aa5.97□□□□□ -1.45
RPAP1-204ENST00000562303 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 ATMQ13315 3056 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 TACC2O95359 2948 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
RPAP1-204ENST00000562303 ADGRG4Q8IZF6 3080 aa5.94□□□□□ -1.46
RPAP1-204ENST00000562303 LRBAP50851 2863 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 CFAP47Q6ZTR5 3102 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 ASH1LQ9NR48 2969 aaKnown RBP5.91□□□□□ -1.46
RPAP1-204ENST00000562303 COL12A1Q99715 3063 aa5.88□□□□□ -1.47
RPAP1-204ENST00000562303 KMT2BQ9UMN6 2715 aaPredicted RBP5.88□□□□□ -1.47
RPAP1-204ENST00000562303 EYSQ5T1H1 3165 aa5.87□□□□□ -1.47
RPAP1-204ENST00000562303 REV3LO60673 3130 aa5.87□□□□□ -1.47
RPAP1-204ENST00000562303 ITPR1Q14643 2758 aa5.86□□□□□ -1.47
RPAP1-204ENST00000562303 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
RPAP1-204ENST00000562303 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
RPAP1-204ENST00000562303 FLNCQ14315 2725 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 H0YAA0 97 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 P0C880 135 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
RPAP1-204ENST00000562303 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
RPAP1-204ENST00000562303 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
RPAP1-204ENST00000562303 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
RPAP1-204ENST00000562303 HIVEP1P15822 2718 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 WDFY3Q8IZQ1 3526 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 APCP25054 2843 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 CRYBG3Q68DQ2 2970 aa5.73□□□□□ -1.49
RPAP1-204ENST00000562303 CELSR2Q9HCU4 2923 aa5.7□□□□□ -1.5
RPAP1-204ENST00000562303 LOC400499M0QZD8 3231 aa5.66□□□□□ -1.5
RPAP1-204ENST00000562303 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
RPAP1-204ENST00000562303 DCHS1Q96JQ0 3298 aa5.65□□□□□ -1.51
RPAP1-204ENST00000562303 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
RPAP1-204ENST00000562303 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
RPAP1-204ENST00000562303 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
RPAP1-204ENST00000562303 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
RPAP1-204ENST00000562303 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.51
RPAP1-204ENST00000562303 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
RPAP1-204ENST00000562303 FBN2P35556 2912 aa5.55□□□□□ -1.52
RPAP1-204ENST00000562303 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
RPAP1-204ENST00000562303 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
RPAP1-204ENST00000562303 TENM3Q9P273 2699 aa5.5□□□□□ -1.53
RPAP1-204ENST00000562303 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
RPAP1-204ENST00000562303 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
RPAP1-204ENST00000562303 NF1P21359 2839 aa5.48□□□□□ -1.53
RPAP1-204ENST00000562303 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
RPAP1-204ENST00000562303 CSMD1Q96PZ7 3565 aa5.46□□□□□ -1.53
RPAP1-204ENST00000562303 RELNP78509 3460 aa5.46□□□□□ -1.54
RPAP1-204ENST00000562303 LAMA5O15230 3695 aa5.42□□□□□ -1.54
RPAP1-204ENST00000562303 DMDP11532 3685 aa5.41□□□□□ -1.54
RPAP1-204ENST00000562303 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
RPAP1-204ENST00000562303 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
RPAP1-204ENST00000562303 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
RPAP1-204ENST00000562303 TGP01266 2768 aa5.36□□□□□ -1.55
RPAP1-204ENST00000562303 CELSR1Q9NYQ6 3014 aa5.34□□□□□ -1.55
RPAP1-204ENST00000562303 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
RPAP1-204ENST00000562303 CUBNO60494 3623 aa5.31□□□□□ -1.56
RPAP1-204ENST00000562303 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
RPAP1-204ENST00000562303 MUC3AQ02505 3323 aa5.28□□□□□ -1.56
RPAP1-204ENST00000562303 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
RPAP1-204ENST00000562303 SPENQ96T58 3664 aaKnown RBP5.22□□□□□ -1.57
RPAP1-204ENST00000562303 PKD1L1Q8TDX9 2849 aa5.21□□□□□ -1.57
RPAP1-204ENST00000562303 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
RPAP1-204ENST00000562303 PDZD2O15018 2839 aa5.21□□□□□ -1.58
RPAP1-204ENST00000562303 VWFP04275 2813 aa5.16□□□□□ -1.58
RPAP1-204ENST00000562303 NBPF19A0A087WUL8 3843 aa5.14□□□□□ -1.59
RPAP1-204ENST00000562303 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
RPAP1-204ENST00000562303 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
RPAP1-204ENST00000562303 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
RPAP1-204ENST00000562303 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
RPAP1-204ENST00000562303 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
RPAP1-204ENST00000562303 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
RPAP1-204ENST00000562303 INE1O15225 51 aa4.98□□□□□ -1.61
RPAP1-204ENST00000562303 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
RPAP1-204ENST00000562303 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
RPAP1-204ENST00000562303 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
RPAP1-204ENST00000562303 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.63
RPAP1-204ENST00000562303 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
RPAP1-204ENST00000562303 TRRAPQ9Y4A5 3859 aa4.84□□□□□ -1.63
RPAP1-204ENST00000562303 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
RPAP1-204ENST00000562303 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
RPAP1-204ENST00000562303 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
RPAP1-204ENST00000562303 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
RPAP1-204ENST00000562303 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
RPAP1-204ENST00000562303 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
RPAP1-204ENST00000562303 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
RPAP1-204ENST00000562303 VPS13CQ709C8 3753 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms