RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 ANKRD11Q6UB99 2663 aaPredicted RBP0.7□□□□□ -2.3
PTPN21-209ENST00000557249 LAMA1P25391 3075 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 DOPEY1Q5JWR5 2465 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 RIF1Q5UIP0 2472 aaKnown RBP0.69□□□□□ -2.3
PTPN21-209ENST00000557249 H3BUX3 64 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
PTPN21-209ENST00000557249 SPTA1P02549 2419 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 ABCA2Q9BZC7 2435 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 TPRP12270 2363 aaKnown RBP0.69□□□□□ -2.3
PTPN21-209ENST00000557249 TNRC18O15417 2968 aaPredicted RBP0.69□□□□□ -2.3
PTPN21-209ENST00000557249 AKAP6Q13023 2319 aa0.69□□□□□ -2.3
PTPN21-209ENST00000557249 USP34Q70CQ2 3546 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 SPEGQ15772 3267 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 A0A096LNI7 61 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 A0A096LPF7 62 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 WDR87Q6ZQQ6 2873 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 CREBBPQ92793 2442 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 CACNA1AO00555 2505 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 WNK1Q9H4A3 2382 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 PRUNE2Q8WUY3 3088 aa0.68□□□□□ -2.3
PTPN21-209ENST00000557249 FREM2Q5SZK8 3169 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 WDFY4Q6ZS81 3184 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 VPS13AQ96RL7 3174 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 FRYLO94915 3013 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 POLQO75417 2590 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 CFAP54Q96N23 3096 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 NBEAQ8NFP9 2946 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 EYSQ5T1H1 3165 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 H3BNG1 76 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 Q5VSD8 79 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 SPINK6Q6UWN8 80 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 COL6A3P12111 3177 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 FRYQ5TBA9 3013 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 MGAQ8IWI9 3026 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 CEP295Q9C0D2 2601 aa0.67□□□□□ -2.3
PTPN21-209ENST00000557249 HRNRQ86YZ3 2850 aaPredicted RBP0.67□□□□□ -2.3
PTPN21-209ENST00000557249 SPTAN1Q13813 2472 aaKnown RBP0.66□□□□□ -2.3
PTPN21-209ENST00000557249 LOC400499M0QZD8 3231 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 AKAP13Q12802 2813 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 ADGRG4Q8IZF6 3080 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 DSPP15924 2871 aaKnown RBP0.66□□□□□ -2.3
PTPN21-209ENST00000557249 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 PKD1L2Q7Z442 2459 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 USP9YO00507 2555 aaPredicted RBP0.66□□□□□ -2.3
PTPN21-209ENST00000557249 USP9XQ93008 2570 aaPredicted RBP0.66□□□□□ -2.3
PTPN21-209ENST00000557249 SPTBN4Q9H254 2564 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 PIEZO1Q92508 2521 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 MUC3AQ02505 3323 aa0.66□□□□□ -2.3
PTPN21-209ENST00000557249 NBASA2RRP1 2371 aa0.65□□□□□ -2.3
PTPN21-209ENST00000557249 PTPN13Q12923 2485 aa0.65□□□□□ -2.3
PTPN21-209ENST00000557249 CELSR1Q9NYQ6 3014 aa0.65□□□□□ -2.3
PTPN21-209ENST00000557249 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
PTPN21-209ENST00000557249 CELSR3Q9NYQ7 3312 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 ACACBO00763 2458 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 MYO15AQ9UKN7 3530 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 BSNQ9UPA5 3926 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 COL6A5A8TX70 2615 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 CFAP46Q8IYW2 2715 aa0.65□□□□□ -2.31
PTPN21-209ENST00000557249 BOD1L1Q8NFC6 3051 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 MYO9AB2RTY4 2548 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 FBN2P35556 2912 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 DMXL2Q8TDJ6 3036 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 CFAP47Q6ZTR5 3102 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 LINC01556Q5JQF7 62 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 C2CD3Q4AC94 2353 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 UBR5O95071 2799 aaPredicted RBP0.64□□□□□ -2.31
PTPN21-209ENST00000557249 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
PTPN21-209ENST00000557249 DMXL1Q9Y485 3027 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 DCHS2Q6V1P9 2916 aa0.64□□□□□ -2.31
PTPN21-209ENST00000557249 ATMQ13315 3056 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 KALRNO60229 2985 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 IGSF10Q6WRI0 2623 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 ZFHX4Q86UP3 3567 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 ITPR1Q14643 2758 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 CHD8Q9HCK8 2581 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 DMDP11532 3685 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 DCHS1Q96JQ0 3298 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 USP24Q9UPU5 2620 aa0.63□□□□□ -2.31
PTPN21-209ENST00000557249 OTOGQ6ZRI0 2925 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 FLNCQ14315 2725 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 TLN2Q9Y4G6 2542 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 ITPR3Q14573 2671 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 TACC2O95359 2948 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 EPG5Q9HCE0 2579 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 PDZD2O15018 2839 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 CCDC168Q8NDH2 2452 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 ZFYVE26Q68DK2 2539 aa0.62□□□□□ -2.31
PTPN21-209ENST00000557249 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
PTPN21-209ENST00000557249 SMG1Q96Q15 3661 aaKnown RBP0.61□□□□□ -2.31
PTPN21-209ENST00000557249 MYO18BQ8IUG5 2567 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 APCP25054 2843 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms