RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
PTPN21-209ENST00000557249 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
PTPN21-209ENST00000557249 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
PTPN21-209ENST00000557249 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
PTPN21-209ENST00000557249 FOXD1Q16676 465 aa12.42□□□□□ -0.42
PTPN21-209ENST00000557249 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
PTPN21-209ENST00000557249 MSH5O43196 834 aa11.74□□□□□ -0.53
PTPN21-209ENST00000557249 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
PTPN21-209ENST00000557249 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
PTPN21-209ENST00000557249 ADRA2BP18089 450 aa11.49□□□□□ -0.57
PTPN21-209ENST00000557249 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
PTPN21-209ENST00000557249 SCAF1Q9H7N4 1312 aaKnown RBP10.62□□□□□ -0.71
PTPN21-209ENST00000557249 MAPK8IP2Q13387 824 aaPredicted RBP10.57□□□□□ -0.72
PTPN21-209ENST00000557249 DMRT2Q9Y5R5 561 aa10.55□□□□□ -0.72
PTPN21-209ENST00000557249 PPP4R3CPQ6ZMV5 832 aa10.25□□□□□ -0.77
PTPN21-209ENST00000557249 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
PTPN21-209ENST00000557249 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
PTPN21-209ENST00000557249 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
PTPN21-209ENST00000557249 HOXD11P31277 338 aaPredicted RBP10.1□□□□□ -0.79
PTPN21-209ENST00000557249 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
PTPN21-209ENST00000557249 RNF39Q9H2S5 420 aa9.95□□□□□ -0.82
PTPN21-209ENST00000557249 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
PTPN21-209ENST00000557249 C1QBPQ07021 282 aaKnown RBP9.85□□□□□ -0.83
PTPN21-209ENST00000557249 DNAJC5BQ9UF47 199 aa9.79□□□□□ -0.84
PTPN21-209ENST00000557249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPN21-209ENST00000557249 NPM3O75607 178 aaKnown RBP9.65□□□□□ -0.86
PTPN21-209ENST00000557249 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
PTPN21-209ENST00000557249 CAPN15O75808 1086 aa9.39□□□□□ -0.91
PTPN21-209ENST00000557249 KCNA4P22459 653 aa9.36□□□□□ -0.91
PTPN21-209ENST00000557249 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
PTPN21-209ENST00000557249 DSG3P32926 999 aa9.28□□□□□ -0.92
PTPN21-209ENST00000557249 APLP2Q06481 763 aa9.28□□□□□ -0.92
PTPN21-209ENST00000557249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.22□□□□□ -0.93
PTPN21-209ENST00000557249 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
PTPN21-209ENST00000557249 HNRNPUL2Q1KMD3 747 aaKnown RBP9.22□□□□□ -0.93
PTPN21-209ENST00000557249 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.94
PTPN21-209ENST00000557249 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
PTPN21-209ENST00000557249 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
PTPN21-209ENST00000557249 ABCB7O75027 752 aa9.12□□□□□ -0.95
PTPN21-209ENST00000557249 POTEHQ6S545 545 aa9.09□□□□□ -0.95
PTPN21-209ENST00000557249 MYCNP04198 464 aaPredicted RBP8.98□□□□□ -0.97
PTPN21-209ENST00000557249 RBM42Q9BTD8 480 aaKnown RBP8.95□□□□□ -0.98
PTPN21-209ENST00000557249 POLA2Q14181 598 aa8.9□□□□□ -0.98
PTPN21-209ENST00000557249 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
PTPN21-209ENST00000557249 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
PTPN21-209ENST00000557249 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
PTPN21-209ENST00000557249 CHRDL2Q6WN34 429 aa8.75□□□□□ -1.01
PTPN21-209ENST00000557249 ATF5Q9Y2D1 282 aaPredicted RBP8.69□□□□□ -1.02
PTPN21-209ENST00000557249 AKT1S1Q96B36 256 aa8.68□□□□□ -1.02
PTPN21-209ENST00000557249 OSCARQ8IYS5 282 aa8.6□□□□□ -1.03
PTPN21-209ENST00000557249 REM2Q8IYK8 340 aaPredicted RBP8.58□□□□□ -1.04
PTPN21-209ENST00000557249 ATXN8OSP0DMR3 200 aa8.56□□□□□ -1.04
PTPN21-209ENST00000557249 ZBTB22O15209 634 aa8.54□□□□□ -1.04
PTPN21-209ENST00000557249 FBLN2P98095 1184 aa8.51□□□□□ -1.05
PTPN21-209ENST00000557249 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
PTPN21-209ENST00000557249 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
PTPN21-209ENST00000557249 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
PTPN21-209ENST00000557249 SPDYE2BA6NHP3 402 aa8.45□□□□□ -1.06
PTPN21-209ENST00000557249 HAX1O00165 279 aa8.45□□□□□ -1.06
PTPN21-209ENST00000557249 SPDYE6P0CI01 402 aa8.45□□□□□ -1.06
PTPN21-209ENST00000557249 SPDYE2Q495Y8 402 aa8.45□□□□□ -1.06
PTPN21-209ENST00000557249 FXR2P51116 673 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPN21-209ENST00000557249 CLEC11AQ9Y240 323 aa8.36□□□□□ -1.07
PTPN21-209ENST00000557249 SPDYE1Q8NFV5 336 aaPredicted RBP8.35□□□□□ -1.07
PTPN21-209ENST00000557249 ZNF692Q9BU19 519 aaPredicted RBP8.35□□□□□ -1.07
PTPN21-209ENST00000557249 PRKAR2AP13861 404 aaKnown RBP8.29□□□□□ -1.08
PTPN21-209ENST00000557249 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
PTPN21-209ENST00000557249 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
PTPN21-209ENST00000557249 PRR29P0C7W0 189 aa8.21□□□□□ -1.1
PTPN21-209ENST00000557249 EVX2Q03828 476 aa8.2□□□□□ -1.1
PTPN21-209ENST00000557249 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPN21-209ENST00000557249 C19orf67A6NJJ6 358 aa8.15□□□□□ -1.1
PTPN21-209ENST00000557249 CHADLQ6NUI6 762 aa8.15□□□□□ -1.1
PTPN21-209ENST00000557249 CSRNP3Q8WYN3 585 aa8.09□□□□□ -1.11
PTPN21-209ENST00000557249 GABBR2O75899 941 aa8.08□□□□□ -1.12
PTPN21-209ENST00000557249 CD44P16070 742 aaKnown RBP8.03□□□□□ -1.12
PTPN21-209ENST00000557249 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
PTPN21-209ENST00000557249 EHMT2Q96KQ7 1210 aa8□□□□□ -1.13
PTPN21-209ENST00000557249 STAG3Q9UJ98 1225 aa8□□□□□ -1.13
PTPN21-209ENST00000557249 CLCN6P51797 869 aa7.97□□□□□ -1.13
PTPN21-209ENST00000557249 LHX8Q68G74 356 aa7.96□□□□□ -1.14
PTPN21-209ENST00000557249 SPDYE4A6NLX3 237 aa7.93□□□□□ -1.14
PTPN21-209ENST00000557249 DCBLD2Q96PD2 775 aa7.92□□□□□ -1.14
PTPN21-209ENST00000557249 ZRANB1Q9UGI0 708 aa7.91□□□□□ -1.14
PTPN21-209ENST00000557249 PAK3O75914 559 aaPredicted RBP7.89□□□□□ -1.15
PTPN21-209ENST00000557249 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
PTPN21-209ENST00000557249 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
PTPN21-209ENST00000557249 NPM1P06748 294 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPN21-209ENST00000557249 POTEIP0CG38 1075 aa7.84□□□□□ -1.15
PTPN21-209ENST00000557249 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
PTPN21-209ENST00000557249 PHF12Q96QT6 1004 aa7.75□□□□□ -1.17
PTPN21-209ENST00000557249 PLEKHG5O94827 1062 aa7.7□□□□□ -1.18
PTPN21-209ENST00000557249 MNX1P50219 401 aaPredicted RBP7.68□□□□□ -1.18
PTPN21-209ENST00000557249 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
PTPN21-209ENST00000557249 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
PTPN21-209ENST00000557249 MIER1Q8N108 512 aa7.62□□□□□ -1.19
PTPN21-209ENST00000557249 PROM2Q8N271 834 aa7.62□□□□□ -1.19
PTPN21-209ENST00000557249 SLC39A7Q92504 469 aa7.61□□□□□ -1.19
PTPN21-209ENST00000557249 C7P10643 843 aa7.6□□□□□ -1.19
PTPN21-209ENST00000557249 ASTLQ6HA08 431 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms