RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
LINC00641-201ENST00000555379 USP34Q70CQ2 3546 aa4.31□□□□□ -1.72
LINC00641-201ENST00000555379 DNAH14Q0VDD8 3507 aa4.29□□□□□ -1.72
LINC00641-201ENST00000555379 PRUNE2Q8WUY3 3088 aa4.29□□□□□ -1.72
LINC00641-201ENST00000555379 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
LINC00641-201ENST00000555379 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
LINC00641-201ENST00000555379 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
LINC00641-201ENST00000555379 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
LINC00641-201ENST00000555379 MYO15AQ9UKN7 3530 aa4.26□□□□□ -1.73
LINC00641-201ENST00000555379 CFAP54Q96N23 3096 aa4.26□□□□□ -1.73
LINC00641-201ENST00000555379 VCANP13611 3396 aa4.25□□□□□ -1.73
LINC00641-201ENST00000555379 NIPBLQ6KC79 2804 aaeCLIP4.25□□□□□ -1.73
LINC00641-201ENST00000555379 NBEAQ8NFP9 2946 aa4.24□□□□□ -1.73
LINC00641-201ENST00000555379 ITPR1Q14643 2758 aa4.24□□□□□ -1.73
LINC00641-201ENST00000555379 APCP25054 2843 aa4.23□□□□□ -1.73
LINC00641-201ENST00000555379 MGAQ8IWI9 3026 aa4.22□□□□□ -1.73
LINC00641-201ENST00000555379 TENM4Q6N022 2769 aa4.22□□□□□ -1.73
LINC00641-201ENST00000555379 TNRC18O15417 2968 aaPredicted RBP4.22□□□□□ -1.73
LINC00641-201ENST00000555379 TRIOO75962 3097 aa4.2□□□□□ -1.74
LINC00641-201ENST00000555379 DMDP11532 3685 aa4.2□□□□□ -1.74
LINC00641-201ENST00000555379 DSPP15924 2871 aaKnown RBP4.2□□□□□ -1.74
LINC00641-201ENST00000555379 SPEGQ15772 3267 aa4.19□□□□□ -1.74
LINC00641-201ENST00000555379 COL6A3P12111 3177 aa4.19□□□□□ -1.74
LINC00641-201ENST00000555379 MUC3AQ02505 3323 aa4.17□□□□□ -1.74
LINC00641-201ENST00000555379 FLNCQ14315 2725 aa4.17□□□□□ -1.74
LINC00641-201ENST00000555379 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
LINC00641-201ENST00000555379 LAMA1P25391 3075 aa4.14□□□□□ -1.75
LINC00641-201ENST00000555379 VPS13AQ96RL7 3174 aa4.13□□□□□ -1.75
LINC00641-201ENST00000555379 FRYQ5TBA9 3013 aa4.12□□□□□ -1.75
LINC00641-201ENST00000555379 WDFY4Q6ZS81 3184 aa4.12□□□□□ -1.75
LINC00641-201ENST00000555379 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
LINC00641-201ENST00000555379 WDFY3Q8IZQ1 3526 aa4.11□□□□□ -1.75
LINC00641-201ENST00000555379 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
LINC00641-201ENST00000555379 FRYLO94915 3013 aa4.09□□□□□ -1.76
LINC00641-201ENST00000555379 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
LINC00641-201ENST00000555379 CELSR3Q9NYQ7 3312 aa4.04□□□□□ -1.76
LINC00641-201ENST00000555379 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
LINC00641-201ENST00000555379 FREM2Q5SZK8 3169 aa4□□□□□ -1.77
LINC00641-201ENST00000555379 LRBAP50851 2863 aa4□□□□□ -1.77
LINC00641-201ENST00000555379 KALRNO60229 2985 aa4□□□□□ -1.77
LINC00641-201ENST00000555379 ASPMQ8IZT6 3477 aa3.99□□□□□ -1.77
LINC00641-201ENST00000555379 ZZEF1O43149 2961 aa3.98□□□□□ -1.77
LINC00641-201ENST00000555379 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
LINC00641-201ENST00000555379 TACC2O95359 2948 aa3.97□□□□□ -1.77
LINC00641-201ENST00000555379 ADGRG4Q8IZF6 3080 aa3.96□□□□□ -1.78
LINC00641-201ENST00000555379 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
LINC00641-201ENST00000555379 LAMA5O15230 3695 aa3.93□□□□□ -1.78
LINC00641-201ENST00000555379 SPENQ96T58 3664 aaKnown RBP3.93□□□□□ -1.78
LINC00641-201ENST00000555379 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
LINC00641-201ENST00000555379 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
LINC00641-201ENST00000555379 ASH1LQ9NR48 2969 aaKnown RBP3.9□□□□□ -1.78
LINC00641-201ENST00000555379 TENM2Q9NT68 2774 aa3.9□□□□□ -1.79
LINC00641-201ENST00000555379 PDZD2O15018 2839 aa3.89□□□□□ -1.79
LINC00641-201ENST00000555379 DMXL1Q9Y485 3027 aa3.89□□□□□ -1.79
LINC00641-201ENST00000555379 CFAP47Q6ZTR5 3102 aa3.88□□□□□ -1.79
LINC00641-201ENST00000555379 BOD1L1Q8NFC6 3051 aa3.88□□□□□ -1.79
LINC00641-201ENST00000555379 MXRA5Q9NR99 2828 aa3.87□□□□□ -1.79
LINC00641-201ENST00000555379 TENM1Q9UKZ4 2725 aa3.87□□□□□ -1.79
LINC00641-201ENST00000555379 DMXL2Q8TDJ6 3036 aa3.87□□□□□ -1.79
LINC00641-201ENST00000555379 KRTAP3-1Q9BYR8 98 aa3.87□□□□□ -1.79
LINC00641-201ENST00000555379 LOC400499M0QZD8 3231 aa3.87□□□□□ -1.79
LINC00641-201ENST00000555379 TENM3Q9P273 2699 aa3.86□□□□□ -1.79
LINC00641-201ENST00000555379 HRNRQ86YZ3 2850 aaPredicted RBP3.86□□□□□ -1.79
LINC00641-201ENST00000555379 HUWE1Q7Z6Z7 4374 aaKnown RBP3.85□□□□□ -1.79
LINC00641-201ENST00000555379 DCHS1Q96JQ0 3298 aa3.84□□□□□ -1.79
LINC00641-201ENST00000555379 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
LINC00641-201ENST00000555379 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
LINC00641-201ENST00000555379 ATMQ13315 3056 aa3.82□□□□□ -1.8
LINC00641-201ENST00000555379 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
LINC00641-201ENST00000555379 NF1P21359 2839 aa3.8□□□□□ -1.8
LINC00641-201ENST00000555379 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
LINC00641-201ENST00000555379 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
LINC00641-201ENST00000555379 DCHS2Q6V1P9 2916 aa3.77□□□□□ -1.81
LINC00641-201ENST00000555379 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
LINC00641-201ENST00000555379 SMG1Q96Q15 3661 aaKnown RBP3.76□□□□□ -1.81
LINC00641-201ENST00000555379 CELSR2Q9HCU4 2923 aa3.74□□□□□ -1.81
LINC00641-201ENST00000555379 ZANQ9Y493 2812 aa3.73□□□□□ -1.81
LINC00641-201ENST00000555379 RELNP78509 3460 aa3.73□□□□□ -1.81
LINC00641-201ENST00000555379 TGP01266 2768 aa3.71□□□□□ -1.82
LINC00641-201ENST00000555379 CRYBG3Q68DQ2 2970 aa3.69□□□□□ -1.82
LINC00641-201ENST00000555379 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
LINC00641-201ENST00000555379 FBN2P35556 2912 aa3.68□□□□□ -1.82
LINC00641-201ENST00000555379 OTOGQ6ZRI0 2925 aa3.66□□□□□ -1.82
LINC00641-201ENST00000555379 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
LINC00641-201ENST00000555379 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
LINC00641-201ENST00000555379 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
LINC00641-201ENST00000555379 CELSR1Q9NYQ6 3014 aa3.62□□□□□ -1.83
LINC00641-201ENST00000555379 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
LINC00641-201ENST00000555379 SVEP1Q4LDE5 3571 aa3.62□□□□□ -1.83
LINC00641-201ENST00000555379 LCE2BO14633 110 aa3.61□□□□□ -1.83
LINC00641-201ENST00000555379 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
LINC00641-201ENST00000555379 ANK3Q12955 4377 aaKnown RBP3.61□□□□□ -1.83
LINC00641-201ENST00000555379 ZFHX3Q15911 3703 aa3.59□□□□□ -1.83
LINC00641-201ENST00000555379 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
LINC00641-201ENST00000555379 DNAH1Q9P2D7 4330 aa3.55□□□□□ -1.84
LINC00641-201ENST00000555379 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
LINC00641-201ENST00000555379 CSMD2Q7Z408 3487 aa3.55□□□□□ -1.84
LINC00641-201ENST00000555379 DNAH10Q8IVF4 4471 aa3.53□□□□□ -1.84
LINC00641-201ENST00000555379 VWFP04275 2813 aa3.53□□□□□ -1.84
LINC00641-201ENST00000555379 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms