RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	ATR	Q13535	2644 aa		0.89	□□□□□ -2.27
LGR5-204	ENST00000547310	PRM1	P04553	51 aa		0.89	□□□□□ -2.27
LGR5-204	ENST00000547310	DEFB110	Q30KQ9	67 aa		0.89	□□□□□ -2.27
LGR5-204	ENST00000547310	UBR5	O95071	2799 aa	Predicted RBP	0.89	□□□□□ -2.27
LGR5-204	ENST00000547310	FBN2	P35556	2912 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	OTOG	Q6ZRI0	2925 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	SPTBN4	Q9H254	2564 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	HTN1	P15515	57 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	KRTAP19-3	Q7Z4W3	81 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	DEFB124	Q8NES8	71 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	CREBBP	Q92793	2442 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	APC2	O95996	2303 aa		0.88	□□□□□ -2.27
LGR5-204	ENST00000547310	CCDC168	Q8NDH2	2452 aa		0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	BSN	Q9UPA5	3926 aa		0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	TNRC18	O15417	2968 aa	Predicted RBP	0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	TNXB	P22105	4242 aa		0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	CHD6	Q8TD26	2715 aa		0.87	□□□□□ -2.27
LGR5-204	ENST00000547310	DNAH11	Q96DT5	4516 aa		0.86	□□□□□ -2.27
LGR5-204	ENST00000547310		A0A096LNI7	61 aa		0.86	□□□□□ -2.27
LGR5-204	ENST00000547310	KRTAP8-1	Q8IUC2	63 aa		0.86	□□□□□ -2.27
LGR5-204	ENST00000547310	BDP1	A6H8Y1	2624 aa		0.86	□□□□□ -2.27
LGR5-204	ENST00000547310	DEFB136	Q30KP8	78 aa		0.85	□□□□□ -2.27
LGR5-204	ENST00000547310	PRKDC	P78527	4128 aa	Known RBP	0.85	□□□□□ -2.27
LGR5-204	ENST00000547310	MYCBP2	O75592	4640 aa		0.85	□□□□□ -2.27
LGR5-204	ENST00000547310	ANK2	Q01484	3957 aa		0.84	□□□□□ -2.27
LGR5-204	ENST00000547310	PIEZO1	Q92508	2521 aa		0.84	□□□□□ -2.27
LGR5-204	ENST00000547310	SACS	Q9NZJ4	4579 aa		0.84	□□□□□ -2.27
LGR5-204	ENST00000547310	STATH	P02808	62 aa		0.84	□□□□□ -2.27
LGR5-204	ENST00000547310	LYST	Q99698	3801 aa		0.84	□□□□□ -2.28
LGR5-204	ENST00000547310	VPS13B	Q7Z7G8	4022 aa		0.84	□□□□□ -2.28
LGR5-204	ENST00000547310	TENM3	Q9P273	2699 aa		0.83	□□□□□ -2.28
LGR5-204	ENST00000547310	KMT2A	Q03164	3969 aa		0.83	□□□□□ -2.28
LGR5-204	ENST00000547310	CHD8	Q9HCK8	2581 aa		0.83	□□□□□ -2.28
LGR5-204	ENST00000547310	NBAS	A2RRP1	2371 aa		0.83	□□□□□ -2.28
LGR5-204	ENST00000547310	FAT2	Q9NYQ8	4349 aa		0.82	□□□□□ -2.28
LGR5-204	ENST00000547310	HIVEP3	Q5T1R4	2406 aa		0.81	□□□□□ -2.28
LGR5-204	ENST00000547310	FRAS1	Q86XX4	4008 aa		0.81	□□□□□ -2.28
LGR5-204	ENST00000547310	COX14	Q96I36	57 aa		0.81	□□□□□ -2.28
LGR5-204	ENST00000547310	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.81	□□□□□ -2.28
LGR5-204	ENST00000547310	NBPF19	A0A087WUL8	3843 aa		0.79	□□□□□ -2.28
LGR5-204	ENST00000547310	MAP1B	P46821	2468 aa	Known RBP	0.79	□□□□□ -2.28
LGR5-204	ENST00000547310	MGA	Q8IWI9	3026 aa		0.79	□□□□□ -2.28
LGR5-204	ENST00000547310	STAB1	Q9NY15	2570 aa		0.78	□□□□□ -2.28
LGR5-204	ENST00000547310	USP24	Q9UPU5	2620 aa		0.78	□□□□□ -2.28
LGR5-204	ENST00000547310	PDZD2	O15018	2839 aa		0.78	□□□□□ -2.28
LGR5-204	ENST00000547310	SPRR2D	P22532	72 aa		0.78	□□□□□ -2.28
LGR5-204	ENST00000547310	CRYBG3	Q68DQ2	2970 aa		0.78	□□□□□ -2.29
LGR5-204	ENST00000547310	ACAN	P16112	2415 aa		0.77	□□□□□ -2.29
LGR5-204	ENST00000547310	SPRR2B	P35325	72 aa		0.77	□□□□□ -2.29
LGR5-204	ENST00000547310		Q9Y3F1	56 aa		0.77	□□□□□ -2.29
LGR5-204	ENST00000547310	DNAH3	Q8TD57	4116 aa		0.77	□□□□□ -2.29
LGR5-204	ENST00000547310	ZFHX4	Q86UP3	3567 aa		0.76	□□□□□ -2.29
LGR5-204	ENST00000547310	RPS29	P62273	56 aa	Known RBP	0.76	□□□□□ -2.29
LGR5-204	ENST00000547310	FLNC	Q14315	2725 aa		0.76	□□□□□ -2.29
LGR5-204	ENST00000547310	MTOR	P42345	2549 aa		0.76	□□□□□ -2.29
LGR5-204	ENST00000547310	FAM186A	A6NE01	2351 aa		0.76	□□□□□ -2.29
LGR5-204	ENST00000547310	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.75	□□□□□ -2.29
LGR5-204	ENST00000547310	MT1A	P04731	61 aa		0.75	□□□□□ -2.29
LGR5-204	ENST00000547310	DEFB108B	Q8NET1	73 aa		0.75	□□□□□ -2.29
LGR5-204	ENST00000547310	SPEN	Q96T58	3664 aa	Known RBP	0.75	□□□□□ -2.29
LGR5-204	ENST00000547310	GCN1	Q92616	2671 aa	Known RBP	0.75	□□□□□ -2.29
LGR5-204	ENST00000547310	ANK3	Q12955	4377 aa	Known RBP	0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	EPG5	Q9HCE0	2579 aa		0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	PTPN13	Q12923	2485 aa		0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	APC	P25054	2843 aa		0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	DEFB133	Q30KQ1	61 aa		0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	RIF1	Q5UIP0	2472 aa	Known RBP	0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	PKHD1L1	Q86WI1	4243 aa		0.74	□□□□□ -2.29
LGR5-204	ENST00000547310	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	NF1	P21359	2839 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	KRTAP21-1	Q3LI58	79 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	LINC01556	Q5JQF7	62 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	ITPR3	Q14573	2671 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	NSD1	Q96L73	2696 aa	Predicted RBP	0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	FRY	Q5TBA9	3013 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	USP9Y	O00507	2555 aa	Predicted RBP	0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	AKAP9	Q99996	3911 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	CACNA1A	O00555	2505 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	DNAH8	Q96JB1	4490 aa		0.73	□□□□□ -2.29
LGR5-204	ENST00000547310	DNAH2	Q9P225	4427 aa		0.72	□□□□□ -2.29
LGR5-204	ENST00000547310	SMR3B	P02814	79 aa	Predicted RBP	0.72	□□□□□ -2.29
LGR5-204	ENST00000547310	CUBN	O60494	3623 aa		0.72	□□□□□ -2.29
LGR5-204	ENST00000547310	SPRR2A	P35326	72 aa		0.71	□□□□□ -2.3
LGR5-204	ENST00000547310	CEP250	Q9BV73	2442 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	DNAH7	Q8WXX0	4024 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	COL12A1	Q99715	3063 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	ACACB	O00763	2458 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	KRTAP19-5	Q3LI72	72 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	PKD1L1	Q8TDX9	2849 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	LRRK2	Q5S007	2527 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	NCOR2	Q9Y618	2525 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	HSPG2	P98160	4391 aa		0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	RANBP2	P49792	3224 aa	Known RBP	0.7	□□□□□ -2.3
LGR5-204	ENST00000547310	DCHS2	Q6V1P9	2916 aa		0.69	□□□□□ -2.3
LGR5-204	ENST00000547310	CELSR3	Q9NYQ7	3312 aa		0.69	□□□□□ -2.3
LGR5-204	ENST00000547310		A0A096LPF7	62 aa		0.69	□□□□□ -2.3
LGR5-204	ENST00000547310	PKD1	P98161	4303 aa		0.69	□□□□□ -2.3
LGR5-204	ENST00000547310	UNC79	Q9P2D8	2635 aa		0.69	□□□□□ -2.3

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