RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 AEBP2Q6ZN18 517 aaPredicted RBP32.05■■■□□ 2.72
LGR5-204ENST00000547310 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
LGR5-204ENST00000547310 SENP3Q9H4L4 574 aaPredicted RBP27.54■■■□□ 2
LGR5-204ENST00000547310 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
LGR5-204ENST00000547310 FOXD1Q16676 465 aa25.72■■□□□ 1.71
LGR5-204ENST00000547310 POTEDQ86YR6 584 aa25.25■■□□□ 1.63
LGR5-204ENST00000547310 MSH5O43196 834 aa24.46■■□□□ 1.51
LGR5-204ENST00000547310 PIAS4Q8N2W9 510 aaPredicted RBP23.79■■□□□ 1.4
LGR5-204ENST00000547310 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
LGR5-204ENST00000547310 PLPPR3Q6T4P5 718 aa23.33■■□□□ 1.33
LGR5-204ENST00000547310 ADRA2BP18089 450 aa23.23■■□□□ 1.31
LGR5-204ENST00000547310 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
LGR5-204ENST00000547310 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
LGR5-204ENST00000547310 CACNB1Q02641 598 aaPredicted RBP21.43■■□□□ 1.02
LGR5-204ENST00000547310 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
LGR5-204ENST00000547310 RNF39Q9H2S5 420 aa20.78■□□□□ 0.92
LGR5-204ENST00000547310 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
LGR5-204ENST00000547310 HOXD11P31277 338 aaPredicted RBP20.61■□□□□ 0.89
LGR5-204ENST00000547310 C1QBPQ07021 282 aaKnown RBP20.47■□□□□ 0.87
LGR5-204ENST00000547310 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
LGR5-204ENST00000547310 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
LGR5-204ENST00000547310 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
LGR5-204ENST00000547310 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
LGR5-204ENST00000547310 POTEHQ6S545 545 aa19.63■□□□□ 0.73
LGR5-204ENST00000547310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.725e-7■□□□□ 9.3
LGR5-204ENST00000547310 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
LGR5-204ENST00000547310 DSG3P32926 999 aa19.16■□□□□ 0.66
LGR5-204ENST00000547310 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
LGR5-204ENST00000547310 CAPN15O75808 1086 aa18.99■□□□□ 0.63
LGR5-204ENST00000547310 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
LGR5-204ENST00000547310 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
LGR5-204ENST00000547310 APLP2Q06481 763 aa18.51■□□□□ 0.55
LGR5-204ENST00000547310 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
LGR5-204ENST00000547310 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
LGR5-204ENST00000547310 ABCB7O75027 752 aa18.43■□□□□ 0.54
LGR5-204ENST00000547310 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
LGR5-204ENST00000547310 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
LGR5-204ENST00000547310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
LGR5-204ENST00000547310 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
LGR5-204ENST00000547310 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
LGR5-204ENST00000547310 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
LGR5-204ENST00000547310 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
LGR5-204ENST00000547310 POLA2Q14181 598 aa17.84■□□□□ 0.45
LGR5-204ENST00000547310 KCNA4P22459 653 aa17.82■□□□□ 0.44
LGR5-204ENST00000547310 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
LGR5-204ENST00000547310 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
LGR5-204ENST00000547310 PIP4P2Q8N4L2 257 aa17.6■□□□□ 0.41
LGR5-204ENST00000547310 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
LGR5-204ENST00000547310 HAX1O00165 279 aa17.49■□□□□ 0.39
LGR5-204ENST00000547310 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
LGR5-204ENST00000547310 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
LGR5-204ENST00000547310 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
LGR5-204ENST00000547310 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
LGR5-204ENST00000547310 EVX2Q03828 476 aa17.2■□□□□ 0.34
LGR5-204ENST00000547310 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
LGR5-204ENST00000547310 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
LGR5-204ENST00000547310 LHX8Q68G74 356 aa16.88■□□□□ 0.29
LGR5-204ENST00000547310 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
LGR5-204ENST00000547310 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
LGR5-204ENST00000547310 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
LGR5-204ENST00000547310 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
LGR5-204ENST00000547310 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
LGR5-204ENST00000547310 GABBR2O75899 941 aa16.81■□□□□ 0.28
LGR5-204ENST00000547310 SPDYE1Q8NFV5 336 aaPredicted RBP16.75■□□□□ 0.27
LGR5-204ENST00000547310 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
LGR5-204ENST00000547310 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
LGR5-204ENST00000547310 FBLN2P98095 1184 aa16.63■□□□□ 0.25
LGR5-204ENST00000547310 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
LGR5-204ENST00000547310 SSUH2Q9Y2M2 353 aa16.53■□□□□ 0.24
LGR5-204ENST00000547310 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
LGR5-204ENST00000547310 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
LGR5-204ENST00000547310 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
LGR5-204ENST00000547310 CLCN6P51797 869 aa16.41■□□□□ 0.22
LGR5-204ENST00000547310 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
LGR5-204ENST00000547310 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
LGR5-204ENST00000547310 ZBTB22O15209 634 aa16.36■□□□□ 0.21
LGR5-204ENST00000547310 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
LGR5-204ENST00000547310 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
LGR5-204ENST00000547310 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
LGR5-204ENST00000547310 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
LGR5-204ENST00000547310 DCBLD2Q96PD2 775 aa16.16■□□□□ 0.18
LGR5-204ENST00000547310 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
LGR5-204ENST00000547310 OTUD5Q96G74 571 aa16■□□□□ 0.15
LGR5-204ENST00000547310 POTEMA6NI47 508 aa15.9■□□□□ 0.14
LGR5-204ENST00000547310 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
LGR5-204ENST00000547310 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
LGR5-204ENST00000547310 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
LGR5-204ENST00000547310 GALR2O43603 387 aaPredicted RBP15.83■□□□□ 0.12
LGR5-204ENST00000547310 POTEGQ6S5H5 508 aa15.83■□□□□ 0.12
LGR5-204ENST00000547310 CREBZFQ9NS37 354 aa15.74■□□□□ 0.11
LGR5-204ENST00000547310 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
LGR5-204ENST00000547310 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
LGR5-204ENST00000547310 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
LGR5-204ENST00000547310 PHF12Q96QT6 1004 aa15.56■□□□□ 0.08
LGR5-204ENST00000547310 ASTLQ6HA08 431 aaPredicted RBP15.53■□□□□ 0.08
LGR5-204ENST00000547310 MAMSTRQ6ZN01 415 aa15.53■□□□□ 0.08
LGR5-204ENST00000547310 C7P10643 843 aa15.52■□□□□ 0.08
LGR5-204ENST00000547310 POTEJP0CG39 1038 aa15.5■□□□□ 0.07
LGR5-204ENST00000547310 SLC39A7Q92504 469 aa15.5■□□□□ 0.07
LGR5-204ENST00000547310 METRNQ9UJH8 293 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms