RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 A8MWP4 228 aa9.08□□□□□ -0.96
XRCC1-202ENST00000543982 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
XRCC1-202ENST00000543982 Q5XG85 94 aa9.07□□□□□ -0.96
XRCC1-202ENST00000543982 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
XRCC1-202ENST00000543982 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
XRCC1-202ENST00000543982 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
XRCC1-202ENST00000543982 NDUFB1O75438 58 aa9.03□□□□□ -0.96
XRCC1-202ENST00000543982 LIMD2Q9BT23 127 aa9.03□□□□□ -0.96
XRCC1-202ENST00000543982 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
XRCC1-202ENST00000543982 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
XRCC1-202ENST00000543982 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
XRCC1-202ENST00000543982 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
XRCC1-202ENST00000543982 SERP2Q8N6R1 65 aa8.97□□□□□ -0.97
XRCC1-202ENST00000543982 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
XRCC1-202ENST00000543982 J3QL48 77 aa8.95□□□□□ -0.98
XRCC1-202ENST00000543982 COX7CP15954 63 aa8.94□□□□□ -0.98
XRCC1-202ENST00000543982 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
XRCC1-202ENST00000543982 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
XRCC1-202ENST00000543982 IGHV6-1A0A0B4J1U7 121 aa8.93□□□□□ -0.98
XRCC1-202ENST00000543982 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
XRCC1-202ENST00000543982 MMP24-AS1A0A0U1RRL7 71 aa8.93□□□□□ -0.98
XRCC1-202ENST00000543982 UQCRQO14949 82 aa8.92□□□□□ -0.98
XRCC1-202ENST00000543982 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
XRCC1-202ENST00000543982 C8orf17Q9NRJ1 99 aa8.92□□□□□ -0.98
XRCC1-202ENST00000543982 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
XRCC1-202ENST00000543982 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
XRCC1-202ENST00000543982 hDV103S1A0JD37 113 aa8.9□□□□□ -0.99
XRCC1-202ENST00000543982 HERC1Q15751 4861 aa8.87□□□□□ -0.99
XRCC1-202ENST00000543982 C8orf87E5RJ46 101 aa8.85□□□□□ -0.99
XRCC1-202ENST00000543982 LINC00313P59037 77 aa8.82□□□□□ -1
XRCC1-202ENST00000543982 TMEM254Q8TBM7 123 aa8.82□□□□□ -1
XRCC1-202ENST00000543982 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
XRCC1-202ENST00000543982 PRR4Q16378 134 aa8.79□□□□□ -1
XRCC1-202ENST00000543982 C20orf197Q8N268 126 aa8.79□□□□□ -1
XRCC1-202ENST00000543982 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
XRCC1-202ENST00000543982 C9orf92A6NGG3 77 aa8.78□□□□□ -1
XRCC1-202ENST00000543982 C5orf47Q569G3 176 aa8.77□□□□□ -1.01
XRCC1-202ENST00000543982 LPAP08519 4548 aa8.76□□□□□ -1.01
XRCC1-202ENST00000543982 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
XRCC1-202ENST00000543982 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
XRCC1-202ENST00000543982 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
XRCC1-202ENST00000543982 NDUFS5O43920 106 aa8.74□□□□□ -1.01
XRCC1-202ENST00000543982 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
XRCC1-202ENST00000543982 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
XRCC1-202ENST00000543982 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
XRCC1-202ENST00000543982 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
XRCC1-202ENST00000543982 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
XRCC1-202ENST00000543982 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
XRCC1-202ENST00000543982 MP68P56378 58 aa8.69□□□□□ -1.02
XRCC1-202ENST00000543982 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
XRCC1-202ENST00000543982 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
XRCC1-202ENST00000543982 H0Y9P7 68 aa8.68□□□□□ -1.02
XRCC1-202ENST00000543982 H3BPC8 53 aa8.65□□□□□ -1.02
XRCC1-202ENST00000543982 LRP2P98164 4655 aa8.64□□□□□ -1.03
XRCC1-202ENST00000543982 ZCCHC13Q8WW36 166 aaKnown RBP8.64□□□□□ -1.03
XRCC1-202ENST00000543982 NDUFC1O43677 76 aa8.63□□□□□ -1.03
XRCC1-202ENST00000543982 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
XRCC1-202ENST00000543982 H7BZZ5 65 aa8.62□□□□□ -1.03
XRCC1-202ENST00000543982 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
XRCC1-202ENST00000543982 XP32Q5T750 250 aa8.62□□□□□ -1.03
XRCC1-202ENST00000543982 Q5W150 140 aa8.6□□□□□ -1.03
XRCC1-202ENST00000543982 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
XRCC1-202ENST00000543982 TMEM258P61165 79 aa8.59□□□□□ -1.03
XRCC1-202ENST00000543982 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
XRCC1-202ENST00000543982 A8MUU9 505 aa8.58□□□□□ -1.04
XRCC1-202ENST00000543982 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
XRCC1-202ENST00000543982 Q75L30 129 aa8.52□□□□□ -1.05
XRCC1-202ENST00000543982 LOC101927531A0A1B0GV80 90 aa8.52□□□□□ -1.05
XRCC1-202ENST00000543982 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
XRCC1-202ENST00000543982 FAM236DA0A1B0GTK5 79 aa8.47□□□□□ -1.05
XRCC1-202ENST00000543982 FAM236CP0DP71 79 aa8.47□□□□□ -1.05
XRCC1-202ENST00000543982 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
XRCC1-202ENST00000543982 ATP5EP56381 51 aaPredicted RBP8.45□□□□□ -1.06
XRCC1-202ENST00000543982 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
XRCC1-202ENST00000543982 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
XRCC1-202ENST00000543982 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
XRCC1-202ENST00000543982 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
XRCC1-202ENST00000543982 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
XRCC1-202ENST00000543982 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
XRCC1-202ENST00000543982 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
XRCC1-202ENST00000543982 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
XRCC1-202ENST00000543982 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
XRCC1-202ENST00000543982 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
XRCC1-202ENST00000543982 HRES1P13985 223 aa8.31□□□□□ -1.08
XRCC1-202ENST00000543982 C4orf26Q17RF5 130 aa8.31□□□□□ -1.08
XRCC1-202ENST00000543982 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
XRCC1-202ENST00000543982 SPINK7P58062 85 aa8.29□□□□□ -1.08
XRCC1-202ENST00000543982 MUC2Q02817 5179 aa8.28□□□□□ -1.08
XRCC1-202ENST00000543982 RNF213Q63HN8 5207 aa8.21□□□□□ -1.09
XRCC1-202ENST00000543982 DMAC1Q96GE9 116 aa8.2□□□□□ -1.1
XRCC1-202ENST00000543982 PRO0628Q9UI54 55 aa8.2□□□□□ -1.1
XRCC1-202ENST00000543982 ACYP2P14621 99 aa8.17□□□□□ -1.1
XRCC1-202ENST00000543982 COA5Q86WW8 74 aa8.15□□□□□ -1.11
XRCC1-202ENST00000543982 SMIM26A0A096LP01 95 aa8.12□□□□□ -1.11
XRCC1-202ENST00000543982 SEC61GP60059 68 aa8.12□□□□□ -1.11
XRCC1-202ENST00000543982 A8MUN3 132 aa8.11□□□□□ -1.11
XRCC1-202ENST00000543982 MPLKIPQ8TAP9 179 aa8.11□□□□□ -1.11
XRCC1-202ENST00000543982 KRTAP3-1Q9BYR8 98 aa8.1□□□□□ -1.11
XRCC1-202ENST00000543982 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
XRCC1-202ENST00000543982 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms