RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
TTC39A-216ENST00000530004 PCP4P48539 62 aa8.25□□□□□ -1.09
TTC39A-216ENST00000530004 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
TTC39A-216ENST00000530004 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
TTC39A-216ENST00000530004 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
TTC39A-216ENST00000530004 NDUFB1O75438 58 aa8.22□□□□□ -1.09
TTC39A-216ENST00000530004 ANAPC13Q9BS18 74 aa8.22□□□□□ -1.09
TTC39A-216ENST00000530004 ATOX1O00244 68 aa8.22□□□□□ -1.09
TTC39A-216ENST00000530004 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
TTC39A-216ENST00000530004 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
TTC39A-216ENST00000530004 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
TTC39A-216ENST00000530004 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
TTC39A-216ENST00000530004 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
TTC39A-216ENST00000530004 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
TTC39A-216ENST00000530004 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
TTC39A-216ENST00000530004 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
TTC39A-216ENST00000530004 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
TTC39A-216ENST00000530004 hDV103S1A0JD37 113 aa8.1□□□□□ -1.11
TTC39A-216ENST00000530004 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
TTC39A-216ENST00000530004 SMIM20Q8N5G0 67 aa8.1□□□□□ -1.11
TTC39A-216ENST00000530004 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
TTC39A-216ENST00000530004 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
TTC39A-216ENST00000530004 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
TTC39A-216ENST00000530004 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
TTC39A-216ENST00000530004 C8orf87E5RJ46 101 aa8.07□□□□□ -1.12
TTC39A-216ENST00000530004 COX7CP15954 63 aa8.07□□□□□ -1.12
TTC39A-216ENST00000530004 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
TTC39A-216ENST00000530004 UQCRQO14949 82 aa8.05□□□□□ -1.12
TTC39A-216ENST00000530004 LINC00313P59037 77 aa8.05□□□□□ -1.12
TTC39A-216ENST00000530004 HERC1Q15751 4861 aa8.04□□□□□ -1.12
TTC39A-216ENST00000530004 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
TTC39A-216ENST00000530004 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
TTC39A-216ENST00000530004 PRR4Q16378 134 aa8.01□□□□□ -1.13
TTC39A-216ENST00000530004 NDUFS5O43920 106 aa7.99□□□□□ -1.13
TTC39A-216ENST00000530004 FP248Q71RG6 208 aaPredicted RBP7.99□□□□□ -1.13
TTC39A-216ENST00000530004 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
TTC39A-216ENST00000530004 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
TTC39A-216ENST00000530004 C20orf197Q8N268 126 aa7.97□□□□□ -1.13
TTC39A-216ENST00000530004 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
TTC39A-216ENST00000530004 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
TTC39A-216ENST00000530004 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
TTC39A-216ENST00000530004 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
TTC39A-216ENST00000530004 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
TTC39A-216ENST00000530004 H0Y9P7 68 aa7.9□□□□□ -1.14
TTC39A-216ENST00000530004 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 MP68P56378 58 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
TTC39A-216ENST00000530004 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
TTC39A-216ENST00000530004 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
TTC39A-216ENST00000530004 Q5W150 140 aa7.85□□□□□ -1.15
TTC39A-216ENST00000530004 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
TTC39A-216ENST00000530004 H3BPC8 53 aa7.83□□□□□ -1.16
TTC39A-216ENST00000530004 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
TTC39A-216ENST00000530004 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
TTC39A-216ENST00000530004 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
TTC39A-216ENST00000530004 LPAP08519 4548 aa7.81□□□□□ -1.16
TTC39A-216ENST00000530004 A8MUU9 505 aa7.8□□□□□ -1.16
TTC39A-216ENST00000530004 H7BZZ5 65 aa7.79□□□□□ -1.16
TTC39A-216ENST00000530004 NDUFC1O43677 76 aa7.79□□□□□ -1.16
TTC39A-216ENST00000530004 XP32Q5T750 250 aa7.76□□□□□ -1.17
TTC39A-216ENST00000530004 LRP2P98164 4655 aa7.76□□□□□ -1.17
TTC39A-216ENST00000530004 Q75L30 129 aa7.75□□□□□ -1.17
TTC39A-216ENST00000530004 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
TTC39A-216ENST00000530004 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
TTC39A-216ENST00000530004 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
TTC39A-216ENST00000530004 TMEM258P61165 79 aa7.74□□□□□ -1.17
TTC39A-216ENST00000530004 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
TTC39A-216ENST00000530004 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
TTC39A-216ENST00000530004 CYP4F30PQ9H0H9 118 aa7.69□□□□□ -1.18
TTC39A-216ENST00000530004 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
TTC39A-216ENST00000530004 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
TTC39A-216ENST00000530004 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
TTC39A-216ENST00000530004 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
TTC39A-216ENST00000530004 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
TTC39A-216ENST00000530004 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
TTC39A-216ENST00000530004 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
TTC39A-216ENST00000530004 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
TTC39A-216ENST00000530004 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
TTC39A-216ENST00000530004 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
TTC39A-216ENST00000530004 HRES1P13985 223 aa7.58□□□□□ -1.2
TTC39A-216ENST00000530004 SPINK7P58062 85 aa7.56□□□□□ -1.2
TTC39A-216ENST00000530004 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
TTC39A-216ENST00000530004 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
TTC39A-216ENST00000530004 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
TTC39A-216ENST00000530004 C4orf26Q17RF5 130 aa7.47□□□□□ -1.21
TTC39A-216ENST00000530004 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.22
TTC39A-216ENST00000530004 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
TTC39A-216ENST00000530004 MUC2Q02817 5179 aa7.42□□□□□ -1.22
TTC39A-216ENST00000530004 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
TTC39A-216ENST00000530004 ACYP2P14621 99 aa7.41□□□□□ -1.22
TTC39A-216ENST00000530004 COA5Q86WW8 74 aa7.4□□□□□ -1.23
TTC39A-216ENST00000530004 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
TTC39A-216ENST00000530004 A8MUN3 132 aa7.37□□□□□ -1.23
TTC39A-216ENST00000530004 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
TTC39A-216ENST00000530004 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
TTC39A-216ENST00000530004 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
TTC39A-216ENST00000530004 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms