RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
EXTL3-214ENST00000523271 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
EXTL3-214ENST00000523271 RANBP2P49792 3224 aaKnown RBP6.55□□□□□ -1.36
EXTL3-214ENST00000523271 NF1P21359 2839 aa6.55□□□□□ -1.36
EXTL3-214ENST00000523271 PRUNE2Q8WUY3 3088 aa6.55□□□□□ -1.36
EXTL3-214ENST00000523271 NBEAQ8NFP9 2946 aa6.55□□□□□ -1.36
EXTL3-214ENST00000523271 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
EXTL3-214ENST00000523271 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
EXTL3-214ENST00000523271 ASH1LQ9NR48 2969 aaKnown RBP6.52□□□□□ -1.37
EXTL3-214ENST00000523271 XP32Q5T750 250 aa6.51□□□□□ -1.37
EXTL3-214ENST00000523271 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
EXTL3-214ENST00000523271 ZANQ9Y493 2812 aa6.49□□□□□ -1.37
EXTL3-214ENST00000523271 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.37
EXTL3-214ENST00000523271 FREM2Q5SZK8 3169 aa6.46□□□□□ -1.38
EXTL3-214ENST00000523271 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
EXTL3-214ENST00000523271 TNRC18O15417 2968 aaPredicted RBP6.44□□□□□ -1.38
EXTL3-214ENST00000523271 DCHS2Q6V1P9 2916 aa6.42□□□□□ -1.38
EXTL3-214ENST00000523271 CRYBG3Q68DQ2 2970 aa6.42□□□□□ -1.38
EXTL3-214ENST00000523271 REV3LO60673 3130 aa6.4□□□□□ -1.38
EXTL3-214ENST00000523271 ADGRG4Q8IZF6 3080 aa6.4□□□□□ -1.39
EXTL3-214ENST00000523271 TGP01266 2768 aa6.39□□□□□ -1.39
EXTL3-214ENST00000523271 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
EXTL3-214ENST00000523271 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
EXTL3-214ENST00000523271 DMXL2Q8TDJ6 3036 aa6.36□□□□□ -1.39
EXTL3-214ENST00000523271 PDZD2O15018 2839 aa6.35□□□□□ -1.39
EXTL3-214ENST00000523271 COL12A1Q99715 3063 aa6.35□□□□□ -1.39
EXTL3-214ENST00000523271 HRNRQ86YZ3 2850 aaPredicted RBP6.33□□□□□ -1.4
EXTL3-214ENST00000523271 LAMA1P25391 3075 aa6.33□□□□□ -1.4
EXTL3-214ENST00000523271 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
EXTL3-214ENST00000523271 MXRA5Q9NR99 2828 aa6.32□□□□□ -1.4
EXTL3-214ENST00000523271 TENM4Q6N022 2769 aa6.31□□□□□ -1.4
EXTL3-214ENST00000523271 INE1O15225 51 aa6.3□□□□□ -1.4
EXTL3-214ENST00000523271 FBN2P35556 2912 aa6.29□□□□□ -1.4
EXTL3-214ENST00000523271 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
EXTL3-214ENST00000523271 BOD1L1Q8NFC6 3051 aa6.27□□□□□ -1.41
EXTL3-214ENST00000523271 ATMQ13315 3056 aa6.24□□□□□ -1.41
EXTL3-214ENST00000523271 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
EXTL3-214ENST00000523271 CELSR1Q9NYQ6 3014 aa6.23□□□□□ -1.41
EXTL3-214ENST00000523271 USP34Q70CQ2 3546 aa6.22□□□□□ -1.41
EXTL3-214ENST00000523271 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
EXTL3-214ENST00000523271 XIRP2A4UGR9 3374 aa6.21□□□□□ -1.42
EXTL3-214ENST00000523271 DMXL1Q9Y485 3027 aa6.18□□□□□ -1.42
EXTL3-214ENST00000523271 UNC80Q8N2C7 3258 aa6.18□□□□□ -1.42
EXTL3-214ENST00000523271 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
EXTL3-214ENST00000523271 CELSR3Q9NYQ7 3312 aa6.16□□□□□ -1.42
EXTL3-214ENST00000523271 BRCA2P51587 3418 aa6.08□□□□□ -1.44
EXTL3-214ENST00000523271 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
EXTL3-214ENST00000523271 VWFP04275 2813 aa6.07□□□□□ -1.44
EXTL3-214ENST00000523271 COL6A3P12111 3177 aa6.06□□□□□ -1.44
EXTL3-214ENST00000523271 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
EXTL3-214ENST00000523271 CDH23Q9H251 3354 aa6□□□□□ -1.45
EXTL3-214ENST00000523271 PKD1L1Q8TDX9 2849 aa5.98□□□□□ -1.45
EXTL3-214ENST00000523271 VCANP13611 3396 aa5.97□□□□□ -1.45
EXTL3-214ENST00000523271 CFAP47Q6ZTR5 3102 aa5.95□□□□□ -1.46
EXTL3-214ENST00000523271 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
EXTL3-214ENST00000523271 DNAH14Q0VDD8 3507 aa5.93□□□□□ -1.46
EXTL3-214ENST00000523271 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
EXTL3-214ENST00000523271 SPTBN5Q9NRC6 3674 aaKnown RBP5.82□□□□□ -1.48
EXTL3-214ENST00000523271 EYSQ5T1H1 3165 aa5.8□□□□□ -1.48
EXTL3-214ENST00000523271 SZT2Q5T011 3432 aa5.79□□□□□ -1.48
EXTL3-214ENST00000523271 MEGF8Q7Z7M0 2845 aa5.78□□□□□ -1.48
EXTL3-214ENST00000523271 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
EXTL3-214ENST00000523271 SPEGQ15772 3267 aa5.76□□□□□ -1.49
EXTL3-214ENST00000523271 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
EXTL3-214ENST00000523271 LOC400499M0QZD8 3231 aa5.71□□□□□ -1.5
EXTL3-214ENST00000523271 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
EXTL3-214ENST00000523271 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
EXTL3-214ENST00000523271 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
EXTL3-214ENST00000523271 FBN1P35555 2871 aaKnown RBP5.61□□□□□ -1.51
EXTL3-214ENST00000523271 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
EXTL3-214ENST00000523271 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
EXTL3-214ENST00000523271 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
EXTL3-214ENST00000523271 NBPF19A0A087WUL8 3843 aa5.5□□□□□ -1.53
EXTL3-214ENST00000523271 MYO15AQ9UKN7 3530 aa5.5□□□□□ -1.53
EXTL3-214ENST00000523271 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
EXTL3-214ENST00000523271 WDFY3Q8IZQ1 3526 aa5.4□□□□□ -1.54
EXTL3-214ENST00000523271 OTOGQ6ZRI0 2925 aa5.39□□□□□ -1.55
EXTL3-214ENST00000523271 ZFHX3Q15911 3703 aa5.37□□□□□ -1.55
EXTL3-214ENST00000523271 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
EXTL3-214ENST00000523271 DCHS1Q96JQ0 3298 aa5.33□□□□□ -1.56
EXTL3-214ENST00000523271 ASPMQ8IZT6 3477 aa5.32□□□□□ -1.56
EXTL3-214ENST00000523271 KRTAP3-2Q9BYR7 98 aa5.29□□□□□ -1.56
EXTL3-214ENST00000523271 TRRAPQ9Y4A5 3859 aa5.26□□□□□ -1.57
EXTL3-214ENST00000523271 SPENQ96T58 3664 aaKnown RBP5.25□□□□□ -1.57
EXTL3-214ENST00000523271 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
EXTL3-214ENST00000523271 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
EXTL3-214ENST00000523271 LAMA5O15230 3695 aa5.21□□□□□ -1.58
EXTL3-214ENST00000523271 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
EXTL3-214ENST00000523271 RELNP78509 3460 aa5.19□□□□□ -1.58
EXTL3-214ENST00000523271 AKAP9Q99996 3911 aa5.18□□□□□ -1.58
EXTL3-214ENST00000523271 SMG1Q96Q15 3661 aaKnown RBP5.12□□□□□ -1.59
EXTL3-214ENST00000523271 CSMD1Q96PZ7 3565 aa5.09□□□□□ -1.59
EXTL3-214ENST00000523271 DMDP11532 3685 aa5.06□□□□□ -1.6
EXTL3-214ENST00000523271 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
EXTL3-214ENST00000523271 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
EXTL3-214ENST00000523271 MT1HL1P0DM35 61 aa5.01□□□□□ -1.61
EXTL3-214ENST00000523271 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
EXTL3-214ENST00000523271 BSNQ9UPA5 3926 aa4.99□□□□□ -1.61
EXTL3-214ENST00000523271 ANK3Q12955 4377 aaKnown RBP4.96□□□□□ -1.62
EXTL3-214ENST00000523271 MUC3AQ02505 3323 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms