RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
MTCL1-205ENST00000517570 MAP1AP78559 2803 aaPredicted RBP8.46□□□□□ -1.06
MTCL1-205ENST00000517570 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
MTCL1-205ENST00000517570 PRUNE2Q8WUY3 3088 aa8.45□□□□□ -1.06
MTCL1-205ENST00000517570 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
MTCL1-205ENST00000517570 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
MTCL1-205ENST00000517570 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
MTCL1-205ENST00000517570 COL6A3P12111 3177 aa8.43□□□□□ -1.06
MTCL1-205ENST00000517570 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
MTCL1-205ENST00000517570 LRBAP50851 2863 aa8.37□□□□□ -1.07
MTCL1-205ENST00000517570 APCP25054 2843 aa8.35□□□□□ -1.07
MTCL1-205ENST00000517570 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
MTCL1-205ENST00000517570 VCANP13611 3396 aa8.34□□□□□ -1.07
MTCL1-205ENST00000517570 SZT2Q5T011 3432 aa8.32□□□□□ -1.08
MTCL1-205ENST00000517570 FLNCQ14315 2725 aa8.32□□□□□ -1.08
MTCL1-205ENST00000517570 UTP20O75691 2785 aaKnown RBP8.31□□□□□ -1.08
MTCL1-205ENST00000517570 ATMQ13315 3056 aa8.28□□□□□ -1.08
MTCL1-205ENST00000517570 NBEAQ8NFP9 2946 aa8.26□□□□□ -1.09
MTCL1-205ENST00000517570 LAMA1P25391 3075 aa8.24□□□□□ -1.09
MTCL1-205ENST00000517570 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.094e-7■■■■■ 50.1
MTCL1-205ENST00000517570 ADGRG4Q8IZF6 3080 aa8.22□□□□□ -1.09
MTCL1-205ENST00000517570 HIVEP1P15822 2718 aa8.21□□□□□ -1.1
MTCL1-205ENST00000517570 KRTAP13-4Q3LI77 160 aa8.21□□□□□ -1.1
MTCL1-205ENST00000517570 ZZEF1O43149 2961 aa8.21□□□□□ -1.1
MTCL1-205ENST00000517570 REV3LO60673 3130 aa8.2□□□□□ -1.1
MTCL1-205ENST00000517570 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
MTCL1-205ENST00000517570 TACC2O95359 2948 aa8.17□□□□□ -1.1
MTCL1-205ENST00000517570 COL12A1Q99715 3063 aa8.16□□□□□ -1.1
MTCL1-205ENST00000517570 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.11
MTCL1-205ENST00000517570 CFAP47Q6ZTR5 3102 aa8.14□□□□□ -1.11
MTCL1-205ENST00000517570 ASH1LQ9NR48 2969 aaKnown RBP8.13□□□□□ -1.11
MTCL1-205ENST00000517570 SPEGQ15772 3267 aa8.11□□□□□ -1.11
MTCL1-205ENST00000517570 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
MTCL1-205ENST00000517570 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
MTCL1-205ENST00000517570 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
MTCL1-205ENST00000517570 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
MTCL1-205ENST00000517570 DMXL2Q8TDJ6 3036 aa8.05□□□□□ -1.12
MTCL1-205ENST00000517570 FRYLO94915 3013 aa8.05□□□□□ -1.12
MTCL1-205ENST00000517570 EYSQ5T1H1 3165 aa8.02□□□□□ -1.13
MTCL1-205ENST00000517570 MYO15AQ9UKN7 3530 aa8.01□□□□□ -1.13
MTCL1-205ENST00000517570 CELSR2Q9HCU4 2923 aa7.98□□□□□ -1.13
MTCL1-205ENST00000517570 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
MTCL1-205ENST00000517570 ZANQ9Y493 2812 aa7.94□□□□□ -1.14
MTCL1-205ENST00000517570 KRTAP15-1Q3LI76 137 aa7.93□□□□□ -1.14
MTCL1-205ENST00000517570 TENM4Q6N022 2769 aa7.92□□□□□ -1.14
MTCL1-205ENST00000517570 DCHS2Q6V1P9 2916 aa7.92□□□□□ -1.14
MTCL1-205ENST00000517570 TNRC18O15417 2968 aaPredicted RBP7.86□□□□□ -1.15
MTCL1-205ENST00000517570 KRTAP10-6P60371 365 aaPredicted RBP7.86□□□□□ -1.15
MTCL1-205ENST00000517570 TGP01266 2768 aa7.82□□□□□ -1.16
MTCL1-205ENST00000517570 FBN2P35556 2912 aa7.75□□□□□ -1.17
MTCL1-205ENST00000517570 DCHS1Q96JQ0 3298 aa7.71□□□□□ -1.18
MTCL1-205ENST00000517570 NF1P21359 2839 aa7.67□□□□□ -1.18
MTCL1-205ENST00000517570 DMXL1Q9Y485 3027 aa7.67□□□□□ -1.18
MTCL1-205ENST00000517570 INE1O15225 51 aa7.65□□□□□ -1.18
MTCL1-205ENST00000517570 ASPMQ8IZT6 3477 aa7.65□□□□□ -1.18
MTCL1-205ENST00000517570 TENM3Q9P273 2699 aa7.64□□□□□ -1.19
MTCL1-205ENST00000517570 WDFY3Q8IZQ1 3526 aa7.62□□□□□ -1.19
MTCL1-205ENST00000517570 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
MTCL1-205ENST00000517570 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.2
MTCL1-205ENST00000517570 MXRA5Q9NR99 2828 aa7.58□□□□□ -1.2
MTCL1-205ENST00000517570 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
MTCL1-205ENST00000517570 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
MTCL1-205ENST00000517570 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
MTCL1-205ENST00000517570 LOC400499M0QZD8 3231 aa7.55□□□□□ -1.2
MTCL1-205ENST00000517570 ZFHX4Q86UP3 3567 aa7.54□□□□□ -1.2
MTCL1-205ENST00000517570 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
MTCL1-205ENST00000517570 CRCT1Q9UGL9 99 aa7.46□□□□□ -1.22
MTCL1-205ENST00000517570 DMDP11532 3685 aa7.44□□□□□ -1.22
MTCL1-205ENST00000517570 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
MTCL1-205ENST00000517570 PDZD2O15018 2839 aa7.43□□□□□ -1.22
MTCL1-205ENST00000517570 MUC3AQ02505 3323 aa7.42□□□□□ -1.22
MTCL1-205ENST00000517570 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
MTCL1-205ENST00000517570 RELNP78509 3460 aa7.41□□□□□ -1.22
MTCL1-205ENST00000517570 NBPF19A0A087WUL8 3843 aa7.36□□□□□ -1.23
MTCL1-205ENST00000517570 SMG1Q96Q15 3661 aaKnown RBP7.29□□□□□ -1.24
MTCL1-205ENST00000517570 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
MTCL1-205ENST00000517570 LAMA5O15230 3695 aa7.28□□□□□ -1.24
MTCL1-205ENST00000517570 LCE3AQ5TA76 89 aa7.27□□□□□ -1.25
MTCL1-205ENST00000517570 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
MTCL1-205ENST00000517570 HUWE1Q7Z6Z7 4374 aaKnown RBP7.18□□□□□ -1.26
MTCL1-205ENST00000517570 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.27
MTCL1-205ENST00000517570 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
MTCL1-205ENST00000517570 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
MTCL1-205ENST00000517570 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
MTCL1-205ENST00000517570 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
MTCL1-205ENST00000517570 SVEP1Q4LDE5 3571 aa7.09□□□□□ -1.27
MTCL1-205ENST00000517570 VWFP04275 2813 aa7.09□□□□□ -1.28
MTCL1-205ENST00000517570 ALMS1Q8TCU4 4167 aa7.08□□□□□ -1.28
MTCL1-205ENST00000517570 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
MTCL1-205ENST00000517570 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
MTCL1-205ENST00000517570 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
MTCL1-205ENST00000517570 SPENQ96T58 3664 aaKnown RBP6.95□□□□□ -1.3
MTCL1-205ENST00000517570 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
MTCL1-205ENST00000517570 FBN1P35555 2871 aaKnown RBP6.94□□□□□ -1.3
MTCL1-205ENST00000517570 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
MTCL1-205ENST00000517570 TRRAPQ9Y4A5 3859 aa6.85□□□□□ -1.31
MTCL1-205ENST00000517570 CUBNO60494 3623 aa6.81□□□□□ -1.32
MTCL1-205ENST00000517570 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
MTCL1-205ENST00000517570 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
MTCL1-205ENST00000517570 AKAP9Q99996 3911 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms