RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 PKD1L1Q8TDX9 2849 aa0.77□□□□□ -2.29
MATR3-226ENST00000515833 PRM1P04553 51 aa0.77□□□□□ -2.29
MATR3-226ENST00000515833 TNRC18O15417 2968 aaPredicted RBP0.77□□□□□ -2.29
MATR3-226ENST00000515833 LPAP08519 4548 aa0.76□□□□□ -2.29
MATR3-226ENST00000515833 ACANP16112 2415 aa0.76□□□□□ -2.29
MATR3-226ENST00000515833 APC2O95996 2303 aa0.76□□□□□ -2.29
MATR3-226ENST00000515833 SACSQ9NZJ4 4579 aa0.75□□□□□ -2.29
MATR3-226ENST00000515833 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 LYSTQ99698 3801 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 NAV2Q8IVL1 2488 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 ACACAQ13085 2346 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 M0QZ58 72 aa0.74□□□□□ -2.29
MATR3-226ENST00000515833 SETD2Q9BYW2 2564 aaPredicted RBP0.74□□□□□ -2.29
MATR3-226ENST00000515833 CLPSL2Q6UWE3 100 aa0.73□□□□□ -2.29
MATR3-226ENST00000515833 SETXQ7Z333 2677 aaKnown RBP0.73□□□□□ -2.29
MATR3-226ENST00000515833 SRRM2Q9UQ35 2752 aaKnown RBP0.73□□□□□ -2.29
MATR3-226ENST00000515833 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
MATR3-226ENST00000515833 DNAH11Q96DT5 4516 aa0.72□□□□□ -2.29
MATR3-226ENST00000515833 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
MATR3-226ENST00000515833 ANK3Q12955 4377 aaKnown RBP0.72□□□□□ -2.29
MATR3-226ENST00000515833 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
MATR3-226ENST00000515833 SPRR2DP22532 72 aa0.7□□□□□ -2.3
MATR3-226ENST00000515833 RPL39P62891 51 aaKnown RBP0.7□□□□□ -2.3
MATR3-226ENST00000515833 CACNA1AO00555 2505 aa0.69□□□□□ -2.3
MATR3-226ENST00000515833 NF1P21359 2839 aa0.69□□□□□ -2.3
MATR3-226ENST00000515833 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
MATR3-226ENST00000515833 NCOR2Q9Y618 2525 aa0.69□□□□□ -2.3
MATR3-226ENST00000515833 VPS13DQ5THJ4 4388 aa0.68□□□□□ -2.3
MATR3-226ENST00000515833 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
MATR3-226ENST00000515833 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
MATR3-226ENST00000515833 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
MATR3-226ENST00000515833 FLNCQ14315 2725 aa0.67□□□□□ -2.3
MATR3-226ENST00000515833 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
MATR3-226ENST00000515833 MTORP42345 2549 aa0.67□□□□□ -2.3
MATR3-226ENST00000515833 TNP1P09430 55 aa0.67□□□□□ -2.3
MATR3-226ENST00000515833 DNAH9Q9NYC9 4486 aa0.67□□□□□ -2.3
MATR3-226ENST00000515833 DMBT1Q9UGM3 2413 aaPredicted RBP0.67□□□□□ -2.3
MATR3-226ENST00000515833 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
MATR3-226ENST00000515833 HSPG2P98160 4391 aa0.66□□□□□ -2.3
MATR3-226ENST00000515833 SPRR2BP35325 72 aa0.66□□□□□ -2.3
MATR3-226ENST00000515833 PKHD1L1Q86WI1 4243 aa0.66□□□□□ -2.3
MATR3-226ENST00000515833 FAM186AA6NE01 2351 aa0.65□□□□□ -2.3
MATR3-226ENST00000515833 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.3
MATR3-226ENST00000515833 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
MATR3-226ENST00000515833 FLNBO75369 2602 aaKnown RBP0.65□□□□□ -2.31
MATR3-226ENST00000515833 RPL39LQ96EH5 51 aaKnown RBP0.65□□□□□ -2.31
MATR3-226ENST00000515833 COL6A3P12111 3177 aa0.65□□□□□ -2.31
MATR3-226ENST00000515833 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
MATR3-226ENST00000515833 COL6A5A8TX70 2615 aa0.63□□□□□ -2.31
MATR3-226ENST00000515833 H3BNG1 76 aa0.63□□□□□ -2.31
MATR3-226ENST00000515833 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
MATR3-226ENST00000515833 GCN1Q92616 2671 aaKnown RBP0.63□□□□□ -2.31
MATR3-226ENST00000515833 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
MATR3-226ENST00000515833 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
MATR3-226ENST00000515833 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
MATR3-226ENST00000515833 STAB1Q9NY15 2570 aa0.61□□□□□ -2.31
MATR3-226ENST00000515833 PDZD2O15018 2839 aa0.61□□□□□ -2.31
MATR3-226ENST00000515833 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
MATR3-226ENST00000515833 HECTD4Q9Y4D8 3996 aa0.61□□□□□ -2.31
MATR3-226ENST00000515833 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
MATR3-226ENST00000515833 HRNRQ86YZ3 2850 aaPredicted RBP0.6□□□□□ -2.31
MATR3-226ENST00000515833 ANKHD1Q8IWZ3 2542 aaKnown RBP0.6□□□□□ -2.31
MATR3-226ENST00000515833 ARHGAP5-AS1Q96IT6 56 aa0.6□□□□□ -2.31
MATR3-226ENST00000515833 SPTBN4Q9H254 2564 aa0.6□□□□□ -2.31
MATR3-226ENST00000515833 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.32
MATR3-226ENST00000515833 DNAH6Q9C0G6 4158 aa0.59□□□□□ -2.32
MATR3-226ENST00000515833 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
MATR3-226ENST00000515833 LRP1BQ9NZR2 4599 aa0.58□□□□□ -2.32
MATR3-226ENST00000515833 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
MATR3-226ENST00000515833 TACC2O95359 2948 aa0.57□□□□□ -2.32
MATR3-226ENST00000515833 SPRR2AP35326 72 aa0.57□□□□□ -2.32
MATR3-226ENST00000515833 CUBNO60494 3623 aa0.57□□□□□ -2.32
MATR3-226ENST00000515833 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
MATR3-226ENST00000515833 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
MATR3-226ENST00000515833 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
MATR3-226ENST00000515833 ANKRD11Q6UB99 2663 aaPredicted RBP0.56□□□□□ -2.32
MATR3-226ENST00000515833 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
MATR3-226ENST00000515833 COL12A1Q99715 3063 aa0.55□□□□□ -2.32
MATR3-226ENST00000515833 DNAH1Q9P2D7 4330 aa0.55□□□□□ -2.32
MATR3-226ENST00000515833 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
MATR3-226ENST00000515833 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
MATR3-226ENST00000515833 CCDC168Q8NDH2 2452 aa0.55□□□□□ -2.32
MATR3-226ENST00000515833 FAT3Q8TDW7 4589 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 NEBP20929 6669 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 UTP20O75691 2785 aaKnown RBP0.54□□□□□ -2.32
MATR3-226ENST00000515833 MT1AP04731 61 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 DEFB110Q30KQ9 67 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 ACACBO00763 2458 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 DMXL1Q9Y485 3027 aa0.54□□□□□ -2.32
MATR3-226ENST00000515833 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.32
MATR3-226ENST00000515833 LEAP2Q969E1 77 aa0.53□□□□□ -2.32
MATR3-226ENST00000515833 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.32
MATR3-226ENST00000515833 CHD7Q9P2D1 2997 aa0.53□□□□□ -2.33
MATR3-226ENST00000515833 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
MATR3-226ENST00000515833 TENM2Q9NT68 2774 aa0.52□□□□□ -2.33
MATR3-226ENST00000515833 RANBP2P49792 3224 aaKnown RBP0.52□□□□□ -2.33
MATR3-226ENST00000515833 NBEAL2Q6ZNJ1 2754 aa0.52□□□□□ -2.33
MATR3-226ENST00000515833 AKAP9Q99996 3911 aa0.52□□□□□ -2.33
MATR3-226ENST00000515833 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms