RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
MATR3-226ENST00000515833 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
MATR3-226ENST00000515833 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
MATR3-226ENST00000515833 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
MATR3-226ENST00000515833 FOXD1Q16676 465 aa19.98■□□□□ 0.79
MATR3-226ENST00000515833 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
MATR3-226ENST00000515833 MSH5O43196 834 aa18.71■□□□□ 0.59
MATR3-226ENST00000515833 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
MATR3-226ENST00000515833 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
MATR3-226ENST00000515833 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
MATR3-226ENST00000515833 ADRA2BP18089 450 aa18.48■□□□□ 0.55
MATR3-226ENST00000515833 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
MATR3-226ENST00000515833 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
MATR3-226ENST00000515833 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
MATR3-226ENST00000515833 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
MATR3-226ENST00000515833 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
MATR3-226ENST00000515833 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
MATR3-226ENST00000515833 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
MATR3-226ENST00000515833 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
MATR3-226ENST00000515833 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
MATR3-226ENST00000515833 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
MATR3-226ENST00000515833 C1QBPQ07021 282 aaKnown RBP15.71■□□□□ 0.11
MATR3-226ENST00000515833 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
MATR3-226ENST00000515833 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
MATR3-226ENST00000515833 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
MATR3-226ENST00000515833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.071e-9■■□□□ 14
MATR3-226ENST00000515833 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
MATR3-226ENST00000515833 KCNA4P22459 653 aa15.05■□□□□ -0
MATR3-226ENST00000515833 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
MATR3-226ENST00000515833 CAPN15O75808 1086 aa14.96□□□□□ -0.01
MATR3-226ENST00000515833 DSG3P32926 999 aa14.91□□□□□ -0.02
MATR3-226ENST00000515833 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
MATR3-226ENST00000515833 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
MATR3-226ENST00000515833 APLP2Q06481 763 aa14.62□□□□□ -0.07
MATR3-226ENST00000515833 ABCB7O75027 752 aa14.61□□□□□ -0.07
MATR3-226ENST00000515833 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
MATR3-226ENST00000515833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
MATR3-226ENST00000515833 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
MATR3-226ENST00000515833 POTEHQ6S545 545 aa14.57□□□□□ -0.08
MATR3-226ENST00000515833 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
MATR3-226ENST00000515833 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
MATR3-226ENST00000515833 POLA2Q14181 598 aa14.23□□□□□ -0.13
MATR3-226ENST00000515833 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
MATR3-226ENST00000515833 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
MATR3-226ENST00000515833 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
MATR3-226ENST00000515833 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
MATR3-226ENST00000515833 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
MATR3-226ENST00000515833 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
MATR3-226ENST00000515833 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
MATR3-226ENST00000515833 ZBTB22O15209 634 aa13.83□□□□□ -0.2
MATR3-226ENST00000515833 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
MATR3-226ENST00000515833 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
MATR3-226ENST00000515833 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
MATR3-226ENST00000515833 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
MATR3-226ENST00000515833 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
MATR3-226ENST00000515833 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
MATR3-226ENST00000515833 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.255e-8■□□□□ 10.1
MATR3-226ENST00000515833 FBLN2P98095 1184 aa13.47□□□□□ -0.25
MATR3-226ENST00000515833 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
MATR3-226ENST00000515833 HAX1O00165 279 aa13.45□□□□□ -0.26
MATR3-226ENST00000515833 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
MATR3-226ENST00000515833 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
MATR3-226ENST00000515833 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
MATR3-226ENST00000515833 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
MATR3-226ENST00000515833 EVX2Q03828 476 aa13.29□□□□□ -0.28
MATR3-226ENST00000515833 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
MATR3-226ENST00000515833 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
MATR3-226ENST00000515833 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
MATR3-226ENST00000515833 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
MATR3-226ENST00000515833 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
MATR3-226ENST00000515833 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
MATR3-226ENST00000515833 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
MATR3-226ENST00000515833 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
MATR3-226ENST00000515833 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
MATR3-226ENST00000515833 GABBR2O75899 941 aa12.96□□□□□ -0.33
MATR3-226ENST00000515833 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
MATR3-226ENST00000515833 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
MATR3-226ENST00000515833 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
MATR3-226ENST00000515833 LHX8Q68G74 356 aa12.73□□□□□ -0.37
MATR3-226ENST00000515833 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
MATR3-226ENST00000515833 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
MATR3-226ENST00000515833 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
MATR3-226ENST00000515833 SPDYE4A6NLX3 237 aa12.64□□□□□ -0.39
MATR3-226ENST00000515833 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
MATR3-226ENST00000515833 CLCN6P51797 869 aa12.6□□□□□ -0.39
MATR3-226ENST00000515833 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
MATR3-226ENST00000515833 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
MATR3-226ENST00000515833 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
MATR3-226ENST00000515833 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
MATR3-226ENST00000515833 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
MATR3-226ENST00000515833 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
MATR3-226ENST00000515833 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
MATR3-226ENST00000515833 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
MATR3-226ENST00000515833 PROM2Q8N271 834 aa12.28□□□□□ -0.44
MATR3-226ENST00000515833 PELP1Q8IZL8 1130 aaKnown RBP12.27□□□□□ -0.45
MATR3-226ENST00000515833 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
MATR3-226ENST00000515833 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
MATR3-226ENST00000515833 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
MATR3-226ENST00000515833 ASTLQ6HA08 431 aaPredicted RBP12.17□□□□□ -0.46
MATR3-226ENST00000515833 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms