RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
GATB-212ENST00000515564 EYSQ5T1H1 3165 aa4.62□□□□□ -1.67
GATB-212ENST00000515564 USP34Q70CQ2 3546 aa4.6□□□□□ -1.67
GATB-212ENST00000515564 COL6A3P12111 3177 aa4.6□□□□□ -1.67
GATB-212ENST00000515564 REV3LO60673 3130 aa4.6□□□□□ -1.67
GATB-212ENST00000515564 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
GATB-212ENST00000515564 UTP20O75691 2785 aaKnown RBP4.58□□□□□ -1.68
GATB-212ENST00000515564 ITPR2Q14571 2701 aa4.58□□□□□ -1.68
GATB-212ENST00000515564 ZANQ9Y493 2812 aa4.58□□□□□ -1.68
GATB-212ENST00000515564 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
GATB-212ENST00000515564 ASH1LQ9NR48 2969 aaKnown RBP4.57□□□□□ -1.68
GATB-212ENST00000515564 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.68
GATB-212ENST00000515564 A8MU10 97 aa4.56□□□□□ -1.68
GATB-212ENST00000515564 TNP1P09430 55 aa4.56□□□□□ -1.68
GATB-212ENST00000515564 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
GATB-212ENST00000515564 SPTBN5Q9NRC6 3674 aaKnown RBP4.55□□□□□ -1.68
GATB-212ENST00000515564 DMBT1Q9UGM3 2413 aaPredicted RBP4.55□□□□□ -1.68
GATB-212ENST00000515564 STAB2Q8WWQ8 2551 aa4.54□□□□□ -1.68
GATB-212ENST00000515564 CFAP47Q6ZTR5 3102 aa4.54□□□□□ -1.68
GATB-212ENST00000515564 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
GATB-212ENST00000515564 APCP25054 2843 aa4.53□□□□□ -1.68
GATB-212ENST00000515564 XP32Q5T750 250 aa4.53□□□□□ -1.68
GATB-212ENST00000515564 HRNRQ86YZ3 2850 aaPredicted RBP4.53□□□□□ -1.69
GATB-212ENST00000515564 TNRC18O15417 2968 aaPredicted RBP4.52□□□□□ -1.69
GATB-212ENST00000515564 DMXL1Q9Y485 3027 aa4.51□□□□□ -1.69
GATB-212ENST00000515564 HIVEP1P15822 2718 aa4.51□□□□□ -1.69
GATB-212ENST00000515564 KMT2BQ9UMN6 2715 aaPredicted RBP4.51□□□□□ -1.69
GATB-212ENST00000515564 CELSR2Q9HCU4 2923 aa4.5□□□□□ -1.69
GATB-212ENST00000515564 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
GATB-212ENST00000515564 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
GATB-212ENST00000515564 NF1P21359 2839 aa4.46□□□□□ -1.7
GATB-212ENST00000515564 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.7
GATB-212ENST00000515564 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
GATB-212ENST00000515564 DCHS2Q6V1P9 2916 aa4.45□□□□□ -1.7
GATB-212ENST00000515564 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
GATB-212ENST00000515564 FBN2P35556 2912 aa4.43□□□□□ -1.7
GATB-212ENST00000515564 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
GATB-212ENST00000515564 MXRA5Q9NR99 2828 aa4.38□□□□□ -1.71
GATB-212ENST00000515564 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
GATB-212ENST00000515564 TENM4Q6N022 2769 aa4.36□□□□□ -1.71
GATB-212ENST00000515564 WDFY3Q8IZQ1 3526 aa4.36□□□□□ -1.71
GATB-212ENST00000515564 A6NN06 94 aa4.36□□□□□ -1.71
GATB-212ENST00000515564 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
GATB-212ENST00000515564 H3BS24 57 aa4.35□□□□□ -1.71
GATB-212ENST00000515564 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
GATB-212ENST00000515564 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
GATB-212ENST00000515564 DMDP11532 3685 aa4.28□□□□□ -1.72
GATB-212ENST00000515564 RELNP78509 3460 aa4.26□□□□□ -1.73
GATB-212ENST00000515564 ASPMQ8IZT6 3477 aa4.25□□□□□ -1.73
GATB-212ENST00000515564 TENM3Q9P273 2699 aa4.25□□□□□ -1.73
GATB-212ENST00000515564 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
GATB-212ENST00000515564 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
GATB-212ENST00000515564 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
GATB-212ENST00000515564 ZFHX4Q86UP3 3567 aa4.2□□□□□ -1.74
GATB-212ENST00000515564 TENM1Q9UKZ4 2725 aa4.19□□□□□ -1.74
GATB-212ENST00000515564 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
GATB-212ENST00000515564 P0C880 135 aa4.18□□□□□ -1.74
GATB-212ENST00000515564 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
GATB-212ENST00000515564 LAMA5O15230 3695 aa4.17□□□□□ -1.74
GATB-212ENST00000515564 PDZD2O15018 2839 aa4.15□□□□□ -1.75
GATB-212ENST00000515564 H0YAA0 97 aa4.14□□□□□ -1.75
GATB-212ENST00000515564 VWFP04275 2813 aa4.13□□□□□ -1.75
GATB-212ENST00000515564 SMG1Q96Q15 3661 aaKnown RBP4.1□□□□□ -1.75
GATB-212ENST00000515564 FBN1P35555 2871 aaKnown RBP4.08□□□□□ -1.76
GATB-212ENST00000515564 TGP01266 2768 aa4.05□□□□□ -1.76
GATB-212ENST00000515564 OTOGQ6ZRI0 2925 aa4.05□□□□□ -1.76
GATB-212ENST00000515564 CSMD1Q96PZ7 3565 aa4.05□□□□□ -1.76
GATB-212ENST00000515564 PKD1L1Q8TDX9 2849 aa4.03□□□□□ -1.76
GATB-212ENST00000515564 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
GATB-212ENST00000515564 NBPF19A0A087WUL8 3843 aa3.99□□□□□ -1.77
GATB-212ENST00000515564 SVEP1Q4LDE5 3571 aa3.98□□□□□ -1.77
GATB-212ENST00000515564 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
GATB-212ENST00000515564 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
GATB-212ENST00000515564 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
GATB-212ENST00000515564 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
GATB-212ENST00000515564 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
GATB-212ENST00000515564 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
GATB-212ENST00000515564 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
GATB-212ENST00000515564 BSNQ9UPA5 3926 aa3.88□□□□□ -1.79
GATB-212ENST00000515564 ANK3Q12955 4377 aaKnown RBP3.88□□□□□ -1.79
GATB-212ENST00000515564 CUBNO60494 3623 aa3.87□□□□□ -1.79
GATB-212ENST00000515564 FBN3Q75N90 2809 aa3.86□□□□□ -1.79
GATB-212ENST00000515564 CSMD2Q7Z408 3487 aa3.85□□□□□ -1.79
GATB-212ENST00000515564 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
GATB-212ENST00000515564 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
GATB-212ENST00000515564 ZFHX3Q15911 3703 aa3.84□□□□□ -1.79
GATB-212ENST00000515564 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
GATB-212ENST00000515564 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
GATB-212ENST00000515564 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
GATB-212ENST00000515564 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
GATB-212ENST00000515564 ALMS1Q8TCU4 4167 aa3.73□□□□□ -1.81
GATB-212ENST00000515564 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
GATB-212ENST00000515564 COL7A1Q02388 2944 aa3.69□□□□□ -1.82
GATB-212ENST00000515564 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
GATB-212ENST00000515564 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
GATB-212ENST00000515564 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
GATB-212ENST00000515564 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
GATB-212ENST00000515564 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
GATB-212ENST00000515564 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
GATB-212ENST00000515564 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms