RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 CD164Q04900 197 aa4.54□□□□□ -1.68
SMAD1-209ENST00000511125 LINC00643Q86TS7 51 aa4.52□□□□□ -1.69
SMAD1-209ENST00000511125 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
SMAD1-209ENST00000511125 NDUFB1O75438 58 aa4.5□□□□□ -1.69
SMAD1-209ENST00000511125 LRP2P98164 4655 aa4.49□□□□□ -1.69
SMAD1-209ENST00000511125 NDUFS5O43920 106 aa4.48□□□□□ -1.69
SMAD1-209ENST00000511125 A8MWP4 228 aa4.48□□□□□ -1.69
SMAD1-209ENST00000511125 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
SMAD1-209ENST00000511125 PRR15Q8IV56 129 aa4.47□□□□□ -1.69
SMAD1-209ENST00000511125 A0A1B0GW54 56 aa4.47□□□□□ -1.69
SMAD1-209ENST00000511125 LINC00313P59037 77 aa4.46□□□□□ -1.7
SMAD1-209ENST00000511125 CXCL6P80162 114 aa4.46□□□□□ -1.7
SMAD1-209ENST00000511125 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 J3KT08 172 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 Q5XG85 94 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
SMAD1-209ENST00000511125 CASC2Q6XLA1 102 aa4.44□□□□□ -1.7
SMAD1-209ENST00000511125 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
SMAD1-209ENST00000511125 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
SMAD1-209ENST00000511125 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
SMAD1-209ENST00000511125 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
SMAD1-209ENST00000511125 HCG22E2RYF7 251 aa4.43□□□□□ -1.7
SMAD1-209ENST00000511125 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
SMAD1-209ENST00000511125 MUC2Q02817 5179 aa4.4□□□□□ -1.7
SMAD1-209ENST00000511125 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.71
SMAD1-209ENST00000511125 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
SMAD1-209ENST00000511125 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
SMAD1-209ENST00000511125 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
SMAD1-209ENST00000511125 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
SMAD1-209ENST00000511125 XP32Q5T750 250 aa4.37□□□□□ -1.71
SMAD1-209ENST00000511125 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
SMAD1-209ENST00000511125 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
SMAD1-209ENST00000511125 C8orf87E5RJ46 101 aa4.35□□□□□ -1.71
SMAD1-209ENST00000511125 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
SMAD1-209ENST00000511125 Q5W150 140 aa4.35□□□□□ -1.71
SMAD1-209ENST00000511125 PCOTHQ58A44 107 aa4.34□□□□□ -1.72
SMAD1-209ENST00000511125 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
SMAD1-209ENST00000511125 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
SMAD1-209ENST00000511125 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
SMAD1-209ENST00000511125 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
SMAD1-209ENST00000511125 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
SMAD1-209ENST00000511125 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
SMAD1-209ENST00000511125 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
SMAD1-209ENST00000511125 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
SMAD1-209ENST00000511125 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
SMAD1-209ENST00000511125 OCR1Q9BZK8 76 aa4.29□□□□□ -1.72
SMAD1-209ENST00000511125 H0Y9P7 68 aa4.29□□□□□ -1.72
SMAD1-209ENST00000511125 ATOX1O00244 68 aa4.29□□□□□ -1.72
SMAD1-209ENST00000511125 A8MUU9 505 aa4.28□□□□□ -1.72
SMAD1-209ENST00000511125 RPL37P61927 97 aaKnown RBP4.28□□□□□ -1.72
SMAD1-209ENST00000511125 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
SMAD1-209ENST00000511125 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
SMAD1-209ENST00000511125 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
SMAD1-209ENST00000511125 PCP4P48539 62 aa4.27□□□□□ -1.73
SMAD1-209ENST00000511125 Q75L30 129 aa4.26□□□□□ -1.73
SMAD1-209ENST00000511125 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
SMAD1-209ENST00000511125 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
SMAD1-209ENST00000511125 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
SMAD1-209ENST00000511125 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
SMAD1-209ENST00000511125 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
SMAD1-209ENST00000511125 SERP2Q8N6R1 65 aa4.25□□□□□ -1.73
SMAD1-209ENST00000511125 MP68P56378 58 aa4.24□□□□□ -1.73
SMAD1-209ENST00000511125 UQCRQO14949 82 aa4.24□□□□□ -1.73
SMAD1-209ENST00000511125 SPINK7P58062 85 aa4.24□□□□□ -1.73
SMAD1-209ENST00000511125 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
SMAD1-209ENST00000511125 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
SMAD1-209ENST00000511125 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
SMAD1-209ENST00000511125 COX7CP15954 63 aa4.21□□□□□ -1.74
SMAD1-209ENST00000511125 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
SMAD1-209ENST00000511125 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
SMAD1-209ENST00000511125 C5orf47Q569G3 176 aa4.2□□□□□ -1.74
SMAD1-209ENST00000511125 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
SMAD1-209ENST00000511125 SMIM20Q8N5G0 67 aa4.19□□□□□ -1.74
SMAD1-209ENST00000511125 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
SMAD1-209ENST00000511125 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
SMAD1-209ENST00000511125 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
SMAD1-209ENST00000511125 A0A0U1RQV1 116 aa4.16□□□□□ -1.74
SMAD1-209ENST00000511125 HRES1P13985 223 aa4.15□□□□□ -1.75
SMAD1-209ENST00000511125 FAM236DA0A1B0GTK5 79 aa4.15□□□□□ -1.75
SMAD1-209ENST00000511125 LOC101927531A0A1B0GV80 90 aa4.15□□□□□ -1.75
SMAD1-209ENST00000511125 FAM236CP0DP71 79 aa4.15□□□□□ -1.75
SMAD1-209ENST00000511125 MUC17Q685J3 4493 aa4.15□□□□□ -1.75
SMAD1-209ENST00000511125 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
SMAD1-209ENST00000511125 H7BZZ5 65 aa4.1□□□□□ -1.75
SMAD1-209ENST00000511125 H3BPC8 53 aa4.08□□□□□ -1.76
SMAD1-209ENST00000511125 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
SMAD1-209ENST00000511125 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
SMAD1-209ENST00000511125 KRTAP3-3Q9BYR6 98 aa4.05□□□□□ -1.76
SMAD1-209ENST00000511125 KRTAP3-2Q9BYR7 98 aa4.05□□□□□ -1.76
SMAD1-209ENST00000511125 M0R2T5 61 aa4.01□□□□□ -1.77
SMAD1-209ENST00000511125 NDUFC1O43677 76 aa4.01□□□□□ -1.77
SMAD1-209ENST00000511125 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
SMAD1-209ENST00000511125 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
SMAD1-209ENST00000511125 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
SMAD1-209ENST00000511125 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
SMAD1-209ENST00000511125 LCA10Q71F78 164 aa3.98□□□□□ -1.77
SMAD1-209ENST00000511125 ACYP2P14621 99 aa3.97□□□□□ -1.77
SMAD1-209ENST00000511125 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms