RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 LINC00158P58513 81 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 DEFB114Q30KQ6 69 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 FXYD6Q9H0Q3 95 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 A0A0C4DFX4 3053 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 COL6A3P12111 3177 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 ABCC8Q09428 1581 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 CEP290O15078 2479 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 PCNX1Q96RV3 2341 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 CREBBPQ92793 2442 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 ADCY10Q96PN6 1610 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 FLNBO75369 2602 aaKnown RBP0.14□□□□□ -2.39
VPS26A-208ENST00000497022 FCER1GP30273 86 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 USMG5Q96IX5 58 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 MUC17Q685J3 4493 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 SVEP1Q4LDE5 3571 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
VPS26A-208ENST00000497022 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 WDR87Q6ZQQ6 2873 aa0.14□□□□□ -2.39
VPS26A-208ENST00000497022 EP300Q09472 2414 aaPredicted RBP0.14□□□□□ -2.39
VPS26A-208ENST00000497022 WNK2Q9Y3S1 2297 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 CCL22O00626 93 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 IAPPP10997 89 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 UBL5Q9BZL1 73 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 FAM208AQ9UK61 1670 aaKnown RBP0.13□□□□□ -2.39
VPS26A-208ENST00000497022 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 CRYBG3Q68DQ2 2970 aa0.13□□□□□ -2.39
VPS26A-208ENST00000497022 DCHS2Q6V1P9 2916 aa0.12□□□□□ -2.39
VPS26A-208ENST00000497022 CSPG4Q6UVK1 2322 aa0.12□□□□□ -2.39
VPS26A-208ENST00000497022 COX6B2Q6YFQ2 88 aa0.12□□□□□ -2.39
VPS26A-208ENST00000497022 HTTP42858 3142 aa0.12□□□□□ -2.39
VPS26A-208ENST00000497022 KIF21BO75037 1637 aa0.12□□□□□ -2.39
VPS26A-208ENST00000497022 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
VPS26A-208ENST00000497022 RELNP78509 3460 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 IQGAP2Q13576 1575 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 TGP01266 2768 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
VPS26A-208ENST00000497022 RPL38P63173 70 aaKnown RBP0.11□□□□□ -2.39
VPS26A-208ENST00000497022 SMIM5Q71RC9 77 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 S4R3F8 94 aa0.11□□□□□ -2.39
VPS26A-208ENST00000497022 PDE4DIPQ5VU43 2346 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 MUC2Q02817 5179 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 DDX60Q8IY21 1712 aaKnown RBP0.1□□□□□ -2.39
VPS26A-208ENST00000497022 SPRR2DP22532 72 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 TFF3Q07654 80 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
VPS26A-208ENST00000497022 ACANP16112 2415 aa0.09□□□□□ -2.39
VPS26A-208ENST00000497022 DMBT1Q9UGM3 2413 aaPredicted RBP0.09□□□□□ -2.39
VPS26A-208ENST00000497022 NBASA2RRP1 2371 aa0.09□□□□□ -2.39
VPS26A-208ENST00000497022 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.39
VPS26A-208ENST00000497022 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
VPS26A-208ENST00000497022 SPTBN4Q9H254 2564 aa0.09□□□□□ -2.4
VPS26A-208ENST00000497022 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.4
VPS26A-208ENST00000497022 PKD1L2Q7Z442 2459 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 ZFHX4Q86UP3 3567 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 ANKHD1Q8IWZ3 2542 aaKnown RBP0.08□□□□□ -2.4
VPS26A-208ENST00000497022 MINOS1Q5TGZ0 78 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 DEFB106AQ8N104 65 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 LINC00308Q8TCZ7 52 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 SMG1Q96Q15 3661 aaKnown RBP0.08□□□□□ -2.4
VPS26A-208ENST00000497022 USP9YO00507 2555 aaPredicted RBP0.08□□□□□ -2.4
VPS26A-208ENST00000497022 TRIOO75962 3097 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 LAMA1P25391 3075 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 RYR1P21817 5038 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 USH2AO75445 5202 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 EPPK1P58107 5090 aaKnown RBP0.08□□□□□ -2.4
VPS26A-208ENST00000497022 ATP7AQ04656 1500 aa0.08□□□□□ -2.4
VPS26A-208ENST00000497022 SNRPGP15A8MWD9 76 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 M0R2T5 61 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 CMC2Q9NRP2 79 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 C6orf48Q9UBA6 75 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 UTP20O75691 2785 aaKnown RBP0.07□□□□□ -2.4
VPS26A-208ENST00000497022 CHD7Q9P2D1 2997 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 ZANQ9Y493 2812 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 VPS13CQ709C8 3753 aa0.07□□□□□ -2.4
VPS26A-208ENST00000497022 FASNP49327 2511 aaKnown RBP0.07□□□□□ -2.4
VPS26A-208ENST00000497022 CSMD1Q96PZ7 3565 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 SMIM27A0A1W2PRY6 76 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 LINC01546A6NGU7 62 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 MRPL33O75394 65 aaKnown RBP0.06□□□□□ -2.4
VPS26A-208ENST00000497022 WT1-ASQ06250 92 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 DEFB135Q30KP9 77 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 BIRC6Q9NR09 4857 aa0.06□□□□□ -2.4
VPS26A-208ENST00000497022 COL12A1Q99715 3063 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 WNK1Q9H4A3 2382 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 CELSR3Q9NYQ7 3312 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 FLNAP21333 2647 aaKnown RBP0.05□□□□□ -2.4
VPS26A-208ENST00000497022 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 HERC2O95714 4834 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 TRPM2O94759 1503 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 SPINK4O60575 86 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 PLNP26678 52 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 PRLHP81277 87 aa0.05□□□□□ -2.4
VPS26A-208ENST00000497022 NMES1Q9C002 83 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms