RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 H3BUX3 64 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 EP300Q09472 2414 aaPredicted RBP0.48□□□□□ -2.33
PTPN12-212ENST00000494248 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 PCLOQ9Y6V0 5065 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 TNRC18O15417 2968 aaPredicted RBP0.48□□□□□ -2.33
PTPN12-212ENST00000494248 CHD7Q9P2D1 2997 aa0.48□□□□□ -2.33
PTPN12-212ENST00000494248 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
PTPN12-212ENST00000494248 SPENQ96T58 3664 aaKnown RBP0.47□□□□□ -2.33
PTPN12-212ENST00000494248 UNC79Q9P2D8 2635 aa0.47□□□□□ -2.33
PTPN12-212ENST00000494248 DEFB110Q30KQ9 67 aa0.47□□□□□ -2.33
PTPN12-212ENST00000494248 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
PTPN12-212ENST00000494248 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
PTPN12-212ENST00000494248 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
PTPN12-212ENST00000494248 ZNF469Q96JG9 3925 aaPredicted RBP0.46□□□□□ -2.34
PTPN12-212ENST00000494248 HSPG2P98160 4391 aa0.46□□□□□ -2.34
PTPN12-212ENST00000494248 HUWE1Q7Z6Z7 4374 aaKnown RBP0.46□□□□□ -2.34
PTPN12-212ENST00000494248 LYSTQ99698 3801 aa0.46□□□□□ -2.34
PTPN12-212ENST00000494248 NBPF19A0A087WUL8 3843 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 KRTAP8-1Q8IUC2 63 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 RHPN1-AS1Q9BWJ2 59 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 PKD1L2Q7Z442 2459 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 HECTD1Q9ULT8 2610 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 DNAH2Q9P225 4427 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 DNHD1Q96M86 4753 aa0.45□□□□□ -2.34
PTPN12-212ENST00000494248 ANK3Q12955 4377 aaKnown RBP0.45□□□□□ -2.34
PTPN12-212ENST00000494248 AKAP6Q13023 2319 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 DYNC2H1Q8NCM8 4307 aaKnown RBP0.44□□□□□ -2.34
PTPN12-212ENST00000494248 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 SRRM2Q9UQ35 2752 aaKnown RBP0.44□□□□□ -2.34
PTPN12-212ENST00000494248 SPRR2DP22532 72 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 CEP290O15078 2479 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 RYR1P21817 5038 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
PTPN12-212ENST00000494248 PIEZO1Q92508 2521 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 ATRQ13535 2644 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 UBR5O95071 2799 aaPredicted RBP0.43□□□□□ -2.34
PTPN12-212ENST00000494248 TENM2Q9NT68 2774 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 PDZD2O15018 2839 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 ZFHX4Q86UP3 3567 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 UBR4Q5T4S7 5183 aa0.43□□□□□ -2.34
PTPN12-212ENST00000494248 RANBP2P49792 3224 aaKnown RBP0.42□□□□□ -2.34
PTPN12-212ENST00000494248 COL6A5A8TX70 2615 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 CUBNO60494 3623 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 SPRR2BP35325 72 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 WNK1Q9H4A3 2382 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 LPAP08519 4548 aa0.42□□□□□ -2.34
PTPN12-212ENST00000494248 APOBP04114 4563 aaKnown RBP0.42□□□□□ -2.34
PTPN12-212ENST00000494248 RELNP78509 3460 aa0.41□□□□□ -2.34
PTPN12-212ENST00000494248 PCNTO95613 3336 aa0.41□□□□□ -2.34
PTPN12-212ENST00000494248 NCOR1O75376 2440 aa0.41□□□□□ -2.34
PTPN12-212ENST00000494248 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
PTPN12-212ENST00000494248 HECTD4Q9Y4D8 3996 aa0.41□□□□□ -2.34
PTPN12-212ENST00000494248 CEP350Q5VT06 3117 aa0.4□□□□□ -2.34
PTPN12-212ENST00000494248 PKD1P98161 4303 aa0.4□□□□□ -2.34
PTPN12-212ENST00000494248 CRYBG3Q68DQ2 2970 aa0.4□□□□□ -2.34
PTPN12-212ENST00000494248 LAMA5O15230 3695 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 FRYQ5TBA9 3013 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 MT1AP04731 61 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 SPRR2AP35326 72 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 DEFB124Q8NES8 71 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 APCP25054 2843 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 MUC2Q02817 5179 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 NOTCH1P46531 2555 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 FAT3Q8TDW7 4589 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 DNAH1Q9P2D7 4330 aa0.4□□□□□ -2.35
PTPN12-212ENST00000494248 RYR3Q15413 4870 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 CREBBPQ92793 2442 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 A0A096LNI7 61 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 APELAP0DMC3 54 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 TRIOO75962 3097 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 KMT2DO14686 5537 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 CELSR3Q9NYQ7 3312 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 STAB1Q9NY15 2570 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 EYSQ5T1H1 3165 aa0.39□□□□□ -2.35
PTPN12-212ENST00000494248 PKD1L1Q8TDX9 2849 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 DNAH6Q9C0G6 4158 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 AKAP9Q99996 3911 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 DEFB1P60022 68 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 SPTA1P02549 2419 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 COL6A3P12111 3177 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 SETD2Q9BYW2 2564 aaPredicted RBP0.38□□□□□ -2.35
PTPN12-212ENST00000494248 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 DNAH9Q9NYC9 4486 aa0.38□□□□□ -2.35
PTPN12-212ENST00000494248 SPTBN5Q9NRC6 3674 aaKnown RBP0.37□□□□□ -2.35
PTPN12-212ENST00000494248 CACNA1AO00555 2505 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 EPPK1P58107 5090 aaKnown RBP0.37□□□□□ -2.35
PTPN12-212ENST00000494248 MACF1Q9UPN3 7388 aaKnown RBP0.37□□□□□ -2.35
PTPN12-212ENST00000494248 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 FAT1Q14517 4588 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 TACC2O95359 2948 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 KIAA1109Q2LD37 5005 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 NF1P21359 2839 aa0.37□□□□□ -2.35
PTPN12-212ENST00000494248 SMR3BP02814 79 aaPredicted RBP0.37□□□□□ -2.35
PTPN12-212ENST00000494248 HTN1P15515 57 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms